◆◆◆IE_03D08 detail◆◆◆

Code nameIE_03D08
LocusAT1G05920
TemplateIT_03D08 (HR2575)
Donor VectorpDONR207
Forward primerIPF_03D08 (ggggacaagtttgtacaaaaaagcaggcttcATGAGTTCGCGTGATAAACCCAAGACTT)
Reverse primerIPR_03D08 (ggggaccactttgtacaagaaagctgggttCTTATCTAAAGACTCAACAACAGAGCTCGT)
Alignment with template seq.1stアミノ酸配列100%一致2nd-
Alignment with TAIR7CDSアミノ酸配列100%一致-
comment
sequence
>IE_03D08_945bp
ATGAGTTCGCGTGATAAACCCAAGACTTTCGCAGAAGTAAGAGAAGAGATATGTAAGAGAAGAGAAGAGATGATTTCGCGTGATAACCAAAAAAAAACCA
AGACTGTCGCACAAGTAAGAGAAGAGAAAGGTAAGAGAAGGGAAGAGATGATTTCGCGTTATAACCAAAAAAAGGCCAAGACTGTCGCACAAGTAAAAGA
AGGGAAAGGTAAGAGAAGAGAAGAGATGATTTCGCGTGATAACCGAACAAAACCCAAGACTGTCGCACAAGTAAGAGATGCGAAAAGGAAGAGAACCTTC
GATCACGTCCCCAGAGGAACAAGGGAACCTCACGCATACCTTCGCAATGATCCAGCGCCTCAAGTTGCTTCTGTCCCCAAGAGTGTCCCAGAAGAGAAAG
ATGTGATATTGGATAGAATCTTGAGTAACGTCCCCAGAAGAAAAAAGACTACTTCTTACGAATTCGTCCCACCAAAACACCCACAAGAACCGCAATGGCT
TCTCCAGGTTATGAGTCGCATGAACGGCGCTGGTGATCCGAAGCTAATCATAGAGAAGAATCTGGACTCGAACGATGTTGATCCACGTCAAAACCGACTC
TCAATCCCTATCAATACCGTAATCCAAAACGATTTCTTGACGCTTGACGAGTCAAGGTTGATTGATGAAGACGAAATCACTAACGAAGGGAATATGGGTG
TTGCAGCGTTTCTTGTTGATCAGCGAACTAAGAAGTGGAACATGGGTTTTAAACAATGGTTTATGACGACTGATTCAGGGAGCAGTTACTGGAGTTTTGT
GTTGCGAGGTGAATGGAGCAACGTCGTTGAGACTAATGGACTGAAAGAAGGCGACAAAATCAGCCTTTGGTCTTTCAGGTCCAACGATATCCTCTGTTTT
GCCCTTGTTCCTCCAACGAGCTCTGTTGTTGAGTCTTTAGATAAG

>IE_03D08_translated
MSSRDKPKTFAEVREEICKRREEMISRDNQKKTKTVAQVREEKGKRREEMISRYNQKKAKTVAQVKEGKGKRREEMISRDNRTKPKTVAQVRDAKRKRTF
DHVPRGTREPHAYLRNDPAPQVASVPKSVPEEKDVILDRILSNVPRRKKTTSYEFVPPKHPQEPQWLLQVMSRMNGAGDPKLIIEKNLDSNDVDPRQNRL
SIPINTVIQNDFLTLDESRLIDEDEITNEGNMGVAAFLVDQRTKKWNMGFKQWFMTTDSGSSYWSFVLRGEWSNVVETNGLKEGDKISLWSFRSNDILCF
ALVPPTSSVVESLDK
Alignment CDS(TAIRver.9)_without_stop_codonとのalignment

100%一致しました。

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