Code name | IE_05C04ï¼IE_09B08ï¼ | |||
---|---|---|---|---|
Locus | AT1G01930 | |||
Template | IT_05C04 (HR1160) | |||
Donor Vector | pDONR207 | |||
Forward primer | IPF_05C04 (ggggacaagtttgtacaaaaaagcaggcttcATGGCGACCACCGGCGCGGCGGCCACCA) | |||
Reverse primer | IPR_05C04 (ggggaccactttgtacaagaaagctgggttACTTGTGCTTGAACTGCTTTGAATGTTAAG) | |||
Alignment with template seq. | 1st | ã¢ããé ¸é å99.80%ä¸è´ | 2nd | ã¢ããé ¸é å100%ä¸è´ |
Alignment with TAIR7CDS | ã¢ããé ¸é å99.80%ä¸è´ | ã¢ããé ¸é å100%ä¸è´ | ||
comment | 1st:(Sequence解æã¾ã§è¡ã£ããããã¬ã¼ã ã¯ãããªããå¡©åºç½®æããã)→2nd(09B08):100% | |||
sequence |
>IE_05C04_1740bp ATGGCGACCACCGGCGCGGCGGCCACCACCGAGATTGGTAATCCAGAATATAAACAGCCTCGATCGATATTTGACTTGACGGCGGATTTCTTTGACTCGT GTCGGTTGTCGAATCCTTCGGAGACTCAATCGGCATTCGGACCACCCAAAACTTTCGATCCAGAGGAGGCGGAGGAGGATAAGAGTTCCAAGGACGGCGT GATTTTGGACAGATGGACCTGTAATACTTGTAAAATTGAGTTCCTGTCTCTTCAAGATCAACGCTACCACTTCAAGTCCGATATTCATCGCCTTAACATC AAGCTGAGTGTTGCTGGCAAGGCTATATTAAAAGAGGAAGATGTTGATGAGTTGACATCTGAGTCGGTCCAAGACTATGACGTGTCTAGCATATCAGGTT CAGAGGACGAAGCTGAGACTAGACCACCCTCTTTCCACTTTGATGCTCAAAAGGGTATTGATAAAAAGAAACTATTTTTCCGTCTTCAAAGTGGTGACAA AGTTTCTATCTGGAAATGCTTAATCATGGACGACGCTGAAAGTGTTTCGTTCGAGAATGACAGAGGAGTTTCTGTTGACTGTTGTGGTAGCTTGGTCGAG AATGAAGTTACTGAGAGGTTGAGAAATTTGATTCGAGAGAATAAGGATGATAGGCAAATGCGTGTCGTGTTGCTTGCAAGTGGTGGCCACTTTGCCGGTA CTGTCTTTAATGGAAAGTCGGTTGTGGCTCATAAGACATTCCACAGATATGTTGTAAGAGCCAAGGCTGGTAAAAAGCAGTCCACAAAAGATGCAAGCGG GAGAAGTATACACTCTGCCGGAGCCTCACTTCGTCGTTACAATGAACTTGCTTTAAAAAAGGATATTCAAGAGCTACTTGCTAGCTGGAAACCTTATTTT GATGGTGCTGCTTGTGTTTTTGTCCATGCTCCCTCAAGCAGTAGGCAATTACTTTTCAATGGAGGCAAACCGTACTTTAGCAGCCAAAACTGCGCTGTAC GAAACGTTCCATTTACGATCCGTCGGCCAACCTTCAAGGAATCACAGCGTATATATAATCAGTTGACTCAGATTGCACATGTAACTGAGGAGATTTTTGT TAATCGACCAGAAGTCACCAAAGCTAATACAGTGGTGCAGACCCACAATGAGGATTCTGGCAAAACCTCAAGAAAGGAAGAGCCCGATGAAACTTCTTCT AGCAACATAATCTTAGAGGAACCAAATCGTATAGAAGAGGATATCGAGGATGGAGTTACTGGTACGTCAACTGCCTTACATGAAGCTGCCAAATCGGGTG ATTGTGAAAGAGTTATGGAGTTCTTGGAGGAGGGTATGGATCCTTGTGCTAAGGATGAAAGAGGCAGAACGCCATACATGCTTGCAAATGAGAAGGAAGT GAGAAACACTTTCAGACGGTTTATGGCGTTAAACCTTGAAAAATGGAATTGGCATGATGCTAAAGTACCCAGCCCGCTCACAAAAGAGATGGAGGAATCT CAAGCTGCCAAGCAGGCAGAAAAAGACGCCAAGCAGAAAGCAAGAACAAAGGAGTTGAAGAAACTACGCAAAGCCCGAGAAAAGAAGGCTCAGGCCGAAG CTGCGCAGGCGGAGAAGGAGAAGCCAATTTCTAAAGTGGAGGAAGTGAGGAGAGCAATGGCAGCACAGAGGGAAAAGAGAGCAGCCGCTGCAGAAAGACG GATGGCATCACTTAACATTCAAAGCAGTTCAAGCACAAGT >IE_05C04_translated MATTGAAATTEIGNPEYKQPRSIFDLTADFFDSCRLSNPSETQSAFGPPKTFDPEEAEEDKSSKDGVILDRWTCNTCKIEFLSLQDQRYHFKSDIHRLNI KLSVAGKAILKEEDVDELTSESVQDYDVSSISGSEDEAETRPPSFHFDAQKGIDKKKLFFRLQSGDKVSIWKCLIMDDAESVSFENDRGVSVDCCGSLVE NEVTERLRNLIRENKDDRQMRVVLLASGGHFAGTVFNGKSVVAHKTFHRYVVRAKAGKKQSTKDASGRSIHSAGASLRRYNELALKKDIQELLASWKPYF DGAACVFVHAPSSSRQLLFNGGKPYFSSQNCAVRNVPFTIRRPTFKESQRIYNQLTQIAHVTEEIFVNRPEVTKANTVVQTHNEDSGKTSRKEEPDETSS SNIILEEPNRIEEDIEDGVTGTSTALHEAAKSGDCERVMEFLEEGMDPCAKDERGRTPYMLANEKEVRNTFRRFMALNLEKWNWHDAKVPSPLTKEMEES QAAKQAEKDAKQKARTKELKKLRKAREKKAQAEAAQAEKEKPISKVEEVRRAMAAQREKRAAAAERRMASLNIQSSSSTS |
|||
Alignment |
◆CDS(TAIRver.9)_without_stop_codonとのalignment◆ 100%一致しました。 |