Code name | IE_07A04 | |||
---|---|---|---|---|
Locus | AT5G41020 | |||
Template | IT_07A04 (ABRC_008) | |||
Donor Vector | pDONR207 | |||
Forward primer | IPF_07A04 (ggggacaagtttgtacaaaaaagcaggcttcATGGCTGAGGAGAAGAAGAATAAGAAG) | |||
Reverse primer | IPR_07A04 (ggggaccactttgtacaagaaagctgggttATCTTCAGGATCATAGGGTCTGTTGTCAAA) | |||
Alignment with template seq. | 1st | 配列解析が行えなかったサンプルです。 | 2nd | アミノ酸配列100%一致 |
Alignment with TAIR7CDS | - | アミノ酸配列100%一致 | ||
comment | 1st:(Sequence解析まで行ったが、読み直す必要がある) | |||
sequence |
>IE_07A04_1764bp ATGGCTGAGGAGAAGAAGAATAAGAAGAAAAAGAGTGACGCTAAGGTTGATTCTGAAGAAACCGGTGAAGAATTCATTTCCGAGCACAGTTCTATGAAGG ATAAGGAAAAGAAGAGGAAGAAGAATAAGCGAGAGAATAAGGATGGTTTTACTGGAGAAGATATGGAGATAACTGGGCGTGAAAGTGAGAAACTAGGTGA TGAGGTTTTTATAGTTAAGAAGAAGAAGAAGTCGAAGAAGCCAATAAGGATTGATTCTGAAGCTGTTGATGCTGTGAAGAAGAAATCGAAAAAGAGAAGT AAGGAGACAAAGGCTGATTCCGAAGCTGAGGATGATGGTGTGGAGAAGAAATCCAAGGAGAAAAGTAAGGAGACAAAGGTTGATTCTGAAGCTCATGATG GTGTGAAGAGGAAGAAGAAGAAGAGCAAGAAAGAATCTGGTGGTGATGTGATAGAAAATACTGAAAGCTCCAAAGTATCTGATAAGAAAAAGGGAAAAAG AAAGCGGGATGATACTGATTTGGGAGCTGAAGAAAACATAGACAAGGAGGTGAAGAGGAAGAACAACAAGAAGAAACCAAGTGTGGATTCAGATGTTGAA GATATCAATTTGGACTCTACAAATGATGGAAAGAAGAAAAGGAAGAAAAAGAAACAAAGTGAGGATTCAGAGACTGAAGAAAACGGCTTGAACTCTACCA AAGACGCAAAGAAGAGAAGGAAGAAGAAGAAGAAGAAGAAGCAAAGTGAAGTCTCTGAGGCTGAAGAAAAGTCTGATAAAAGTGATGAAGACTTGACCAC CCCATCTACATCAAGTAAAAGGGTGAAGTTTTCTGACCAAGTGGAGTTTTTTCCTAGTGATGATGATGAAGGAACGGAAGATGATGATGAAGAAGAAGTT AAGGTGGTGAGGGGTAAGCGGTTTACAAAAGAAGAAGATGAGATGGTAAAGAATGCTGTATTAGAATACATTGATAACCATGCTTTAGGAGATGAGGGGA TAAAGATGGTTATGGAATGCAAGGCATACCCACAACTTAAAGGCTGTTGGAAAGAAATTACATCTGCTTTACCTTGGAGGACTTATAATAGTGTGTATCA TCGTGCACATACTATATTTGAAGCAGGATCTCAGGGGATATGGACGAAAGAGGATATTGAACTCGTTATGGAGTTTCAAAAGACACACGGGAATGATTGG AAAACACTTGCAGATGCAATGGGTAAGCACAGGAAGCATGTGAAAGACGCTTGGAGGAGAGGAAGATTGGCAGGTAAGAAGAAAGGACATTGGATGAGGG AGGAGTATCAAAACCTCTTTGACCTTGTCAACAAAGACCTTAGAATGAAAGCATTCAAAGAGAAACACTCAAAACATGGTATGCTCAAAGATAACATCCC TTGGATGGCTATAAGCGACGTACTTGAAACACGGGACCACGTGACTTGCTGCCAGAAATGGTATGAGCAGTTGATATCACCAATGGTAGCAAAGGGAATG TGGGCTAACGTTGATGACTATAGGCTCTTGGAAGAGCTTTTGAAACTGGATGCTGCTTGTATCGACGATGTGGATTGGGATAATCTTTTGGAGAATCGAG ATGGAGAAGCTTGTAGAAAACGGTGGAACCAGATGATCATTCATATCGGCGTACCGAAATCGAAAACATTTGCAGAACAAGTTGAGATTTTGTCTGACAG GTATTGCCCTGACATAGCTGAGGACAGAGAGGATTTTGACAACAGACCCTATGATCCTGAAGAT >IE_07A04_translated MAEEKKNKKKKSDAKVDSEETGEEFISEHSSMKDKEKKRKKNKRENKDGFTGEDMEITGRESEKLGDEVFIVKKKKKSKKPIRIDSEAVDAVKKKSKKRS KETKADSEAEDDGVEKKSKEKSKETKVDSEAHDGVKRKKKKSKKESGGDVIENTESSKVSDKKKGKRKRDDTDLGAEENIDKEVKRKNNKKKPSVDSDVE DINLDSTNDGKKKRKKKKQSEDSETEENGLNSTKDAKKRRKKKKKKKQSEVSEAEEKSDKSDEDLTTPSTSSKRVKFSDQVEFFPSDDDEGTEDDDEEEV KVVRGKRFTKEEDEMVKNAVLEYIDNHALGDEGIKMVMECKAYPQLKGCWKEITSALPWRTYNSVYHRAHTIFEAGSQGIWTKEDIELVMEFQKTHGNDW KTLADAMGKHRKHVKDAWRRGRLAGKKKGHWMREEYQNLFDLVNKDLRMKAFKEKHSKHGMLKDNIPWMAISDVLETRDHVTCCQKWYEQLISPMVAKGM WANVDDYRLLEELLKLDAACIDDVDWDNLLENRDGEACRKRWNQMIIHIGVPKSKTFAEQVEILSDRYCPDIAEDREDFDNRPYDPED |
|||
Alignment |
◆CDS(TAIRver.9)_without_stop_codonとのalignment◆ 100%一致しました。 |