◆◆◆IE_07A05 detail◆◆◆

Code nameIE_07A05
LocusAT5G58850
TemplateIT_07A05 (ABRC_009)
Donor VectorpDONR207
Forward primerIPF_07A05 (ggggacaagtttgtacaaaaaagcaggcttcATGGAAGACCGACGCCTTGTCCATGGA)
Reverse primerIPR_07A05 (ggggaccactttgtacaagaaagctgggttGACCAACGGGAAGCAGATGTTGCTACCTTG)
Alignment with template seq.1st配列解析が行えなかったサンプルです。2ndアミノ酸配列100%一致
Alignment with TAIR7CDS-アミノ酸配列100%一致
comment1st:(Sequence解析まで行ったが、読み直す必要がある)
sequence
>IE_07A05_1290bp
ATGGAAGACCGACGCCTTGTCCATGGAGCTGCGCCGCCGTTGACAGCCGTGGAGAGATTCTTATACGGTCAAAAGAATGATGCCTTGTGTTCCAAGAAAC
AAGAGAGTTCTAGAGACCAACCGATCGTGAAGACAAAAATATCGATTGAGACTAGAAGCGACAACAAAGAGAACACAACGTTTGGGCCGACGAGGGAGAA
ACACTTGGTCCTTAATGGCGGCAACAGAAACCCTACTGGAGAAGTGGTCGCTAGAAGTGCAGCCAGAGATTATCAAAACAGTACGAAGAAACGATCATCC
AAGAACCTCATCAAAGGGCAATGGACGGCGGAAGAAGACAGGAAGTTGATAAGGTTGGTGAGGCAACATGGGGAGAGGAAATGGGCAATGATATCGGAGA
AACTTGAGGGAAGAGCAGGCAAACAATGTCGTGAGAGATGGCATAATCATCTCCGTCCTGATATTAAGAAAGATGGATGGAGTGAAGAAGAAGAGAGGGT
TCTTGTGGAATCACACATGAGAATCGGGAACAAATGGGCAGAGATCGCTAAACTCATACCAGGACGGACTGAGAATTCTATCAAGAACCATTGGAATGCG
ACCAAGAGACGTCAAAATTCAAAACGCAAACACAAACGCGAATCAAACGCTGATAACAATGATAGAGATGCCTCTCCATCAGCTAAAAGACCATGCATTC
TCCAAGACTACATCAAAAGTATCGAGAGAAATAACATTAACAAGGACAATGACGAGAAGAAGAATGAGAACACCATCAGTGTTATTTCTACACCTAATCT
TGATCAGATCTATTCTGATGGTGATTCCGCGTCGTCCATCCTTGGCGGTCCATATGACGAAGAGCTAGATTACTTTCAAAATATCTTTGCAAACCATCCG
ATTTCTCTTGAGAATTTAGGTTTGAGCCAAACTTCGGATGAGGTAACTCAGTCTTCATCATCTGGGTTCATGATCAAGAACCCTAACCCTAACTTGCACG
ACAGTGTTGGAATTCATCATCAAGAGGCAACGATCACAGCTCCGGCGAATACACCCCACCTTGCGTCTGATATCTACTTATCTTATTTATTGAACGGTAC
GACGTCTTCATACTCCGACACTCATTTTCCGTCTTCCTCATCTTCCACGTCATCCACCACCGTAGAGCATGGAGGCCACAACGAGTTTCTTGAGCCTCAA
GCTAACTCTACAAGTGAAAGAAGAGAAATGGATCTGATAGAGATGCTCTCTGGTTCTATTCAAGGTAGCAACATCTGCTTCCCGTTGGTC

>IE_07A05_translated
MEDRRLVHGAAPPLTAVERFLYGQKNDALCSKKQESSRDQPIVKTKISIETRSDNKENTTFGPTREKHLVLNGGNRNPTGEVVARSAARDYQNSTKKRSS
KNLIKGQWTAEEDRKLIRLVRQHGERKWAMISEKLEGRAGKQCRERWHNHLRPDIKKDGWSEEEERVLVESHMRIGNKWAEIAKLIPGRTENSIKNHWNA
TKRRQNSKRKHKRESNADNNDRDASPSAKRPCILQDYIKSIERNNINKDNDEKKNENTISVISTPNLDQIYSDGDSASSILGGPYDEELDYFQNIFANHP
ISLENLGLSQTSDEVTQSSSSGFMIKNPNPNLHDSVGIHHQEATITAPANTPHLASDIYLSYLLNGTTSSYSDTHFPSSSSSTSSTTVEHGGHNEFLEPQ
ANSTSERREMDLIEMLSGSIQGSNICFPLV
Alignment CDS(TAIRver.9)_without_stop_codonとのalignment

100%一致しました。

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