Code name | IE_07B07 | |||
---|---|---|---|---|
Locus | AT4G23980 | |||
Template | IT_07B07 (ABRC_057) | |||
Donor Vector | pDONR207 | |||
Forward primer | IPF_07B07 (ggggacaagtttgtacaaaaaagcaggcttcATGGCAAATCGCGGAGGTGAATATCTG) | |||
Reverse primer | IPR_07B07 (ggggaccactttgtacaagaaagctgggttGTTGGAATGATTATCTGTTTTGGAAGTTGT) | |||
Alignment with template seq. | 1st | 配列解析が行えなかったサンプルです。 | 2nd | アミノ酸配列100%一致 |
Alignment with TAIR7CDS | - | アミノ酸配列100%一致 | ||
comment | 1st:(Sequence解析まで行ったが、読み直す必要がある) | |||
sequence |
>IE_07B07_1914bp ATGGCAAATCGCGGAGGTGAATATCTGTACGATGAGTTATGGAAATTATGCGCGGGACCTCTTGTTGATGTTCCTCAAGCTCAAGAAAGAGTTTATTATT TTCCTCAAGGTCACATGGAACAACTCGAAGCGTCAACGCAACAAGTCGACTTAAATACGATGAAGCCTCTTTTTGTTCTTCCTCCTAAGATTCTCTGCAA TGTTATGAACGTTAGTCTTCAGGCGGAGAAAGATACGGATGAGGTCTATGCTCAGATTACTTTGATCCCTGTTGGAACTGAAGTTGATGAACCTATGAGT CCTGATCCCTCTCCTCCTGAGTTGCAAAGGCCGAAAGTTCACTCTTTCAGCAAGGTTTTGACAGCGTCTGATACAAGCACCCATGGTGGCTTTTCTGTTC TAAGGAAACATGCCACGGAATGTCTTCCTCCGCTGGATATGACTCAGCAAACCCCGACCCAGGAGTTAGTAGCCGAAGATGTGCACGGTTATCAGTGGAA ATTCAAGCATATTTTTAGAGGCCAACCACGGAGGCATCTATTGACGACAGGGTGGAGCACCTTTGTTACATCAAAGAGATTGGTTGCTGGGGACACCTTT GTATTCCTGAGAGGGGAGAACGGAGAGTTGCGAGTTGGAGTCAGACGTGCTAATCTTCAACAGAGCAGTATGCCTTCATCCGTTATATCAAGTCATAGTA TGCATCTGGGAGTGCTTGCTACTGCACGCCATGCTACTCAAACGAAAACTATGTTCATTGTATACTATAAACCAAGGACAAGCCAATTCATCATTAGCTT GAACAAATATCTAGAAGCCATGAGCAATAAGTTCTCTGTAGGGATGAGATTTAAGATGCGTTTTGAGGGAGAGGATTCCCCTGAAAGAAGATATTCTGGC ACGGTTATTGGTGTGAAAGACTGCTCCCCTCACTGGAAAGACTCAAAATGGCGATGCTTAGAAGTTCATTGGGATGAGCCTGCATCGATTTCAAGACCCA ATAAGGTTTCACCATGGGAAATTGAACCGTTTGTAAATTCAGAAAACGTTCCCAAATCAGTTATGCTGAAGAACAAAAGGCCCCGTCAAGTTAGTGAAGT ATCTGCACTTGATGTAGGCATAACAGCTTCAAACCTTTGGAGCTCTGTTTTGACGCAACCCCATGAGTTTGCACAATCGTGCATCACCTCACAGTGGAGT TCTCCTCAGCAATGTCATCGTGATGCAAATGAGGATGCTAAGAAATCTGACTGGCTAAATAACTCTTACTCTGTGTCAAATGTAGCAAAAGACTCAACAC TGAACGACCAAATGGTTTCCCCAGTCGAGCAGAAGAAGCCTGAGACAACCGCTAATTATAGATTATTTGGAATTGATCTGATGAGTTCCTCCCTAGCGGT TCCTGAGGAGAAAACTGCACCCATGCGACCAATCAACATATCCAAACCGACTATGGACAGCCACTCAGACCCAAAATCAGAGATTTCAAAAGTATCAGAA GAGAAAAAGCAGGAACCTGCGGAGGGATCACCAAAAGAGGTCCAAAGCAAGCAAAGCAGTTCTACAAGAAGCCGTACCAAGGTGCAGATGCAAGGCGTAC CTGTGGGCAGGGCTGTGGATTTAAATGCGCTAAAGGGGTACAACGAGCTCATAGATGACATTGAGAAGCTGTTTGACATAAAAGGGGAACTGCGGAGTCG CAATCAATGGGAAATAGTGTTCACAGACGATGAGGGAGATATGATGCTTGTCGGTGATGACCCATGGCCTGAGTTCTGCAACATGGTGAAGAGAATATTC ATATGGTCGAAAGAGGAAGTGAAGAAAATGACGCCTGGGAACCAACTCCGGATGCTGTTAAGGGAAGTTGAAACAACACTAACAACAACTTCCAAAACAG ATAATCATTCCAAC >IE_07B07_translated MANRGGEYLYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMS PDPSPPELQRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTF VFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQTKTMFIVYYKPRTSQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSG TVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVMLKNKRPRQVSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQWS SPQQCHRDANEDAKKSDWLNNSYSVSNVAKDSTLNDQMVSPVEQKKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSHSDPKSEISKVSE EKKQEPAEGSPKEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIF IWSKEEVKKMTPGNQLRMLLREVETTLTTTSKTDNHSN |
|||
Alignment |
◆CDS(TAIRver.9)_without_stop_codonとのalignment◆ 100%一致しました。 |