| Code name | IE_07F06 | |||
|---|---|---|---|---|
| Locus | AT1G03840 | |||
| Template | IT_07F06 (ABRC_224) | |||
| Donor Vector | pDONR207 | |||
| Forward primer | IPF_07F06 (ggggacaagtttgtacaaaaaagcaggcttcATGACAACTGAAGATCAGACAATTTCA) | |||
| Reverse primer | IPR_07F06 (ggggaccactttgtacaagaaagctgggttAATCCATCCATTGATAGAGGAAGAATGGCA) | |||
| Alignment with template seq. | 1st | 配列解析が行えなかったサンプルです。 | 2nd | アミノ酸配列100%一致 |
| Alignment with TAIR7CDS | - | アミノ酸配列100%一致 | ||
| comment | 1st:(Sequence解析まで行ったが、フレームがずれる) | |||
| sequence |
>IE_07F06_1518bp ATGACAACTGAAGATCAGACAATTTCAAGTAGTGGAGGATATGTCCAAAGCTCATCAACAACTGATCATGTTGATCATCATCATCATGATCAACATGAAT CCCTCAATCCTCCTCTTGTCAAGAAGAAGAGAAACCTCCCTGGAAATCCTGATCCAGAAGCTGAGGTCATAGCTCTATCTCCAAAGACACTTATGGCCAC AAATCGTTTCCTCTGCGAGATATGTGGAAAAGGGTTTCAAAGAGACCAGAATCTACAGCTTCACCGTCGAGGACACAACCTCCCATGGAAGCTAAAGCAG AGGACGAGCAAAGAAGTAAGGAAACGAGTGTATGTATGTCCAGAAAAGAGTTGCGTCCACCACCATCCGACGAGGGCACTTGGTGATCTTACCGGCATTA AGAAACATTTTTGTCGGAAACATGGCGAGAAAAAGTGGAAGTGTGAGAAATGCGCCAAGAGATATGCAGTCCAATCTGACTGGAAGGCTCATTCCAAGAC TTGTGGGACTAGAGAATATAGATGCGACTGTGGTACAATTTTCTCCAGGAGAGACAGCTTCATTACACATAGAGCGTTCTGTGACGCTTTAGCAGAAGAA ACCGCTAGGCTAAACGCAGCCTCGCATCTCAAAAGCTTTGCCGCAACCGCTGGTAGTAATCTAAACTATCATTATCTCATGGGGACACTTATCCCATCAC CATCACTACCACAACCACCGTCGTTTCCGTTCGGACCACCGCAACCGCAACATCATCACCACCACCAATTCCCAATCACAACCAACAACTTCGATCATCA AGACGTCATGAAACCAGCGTCTACGCTCTCTTTATGGTCGGGAGGAAATATTAATCATCATCAGCAAGTGACCATCGAGGACCGTATGGCGCCGCAGCCG CATTCACCGCAAGAGGATTACAATTGGGTTTTCGGAAACGCGAATAATCACGGCGAGTTAATAACGACGAGCGATTCACTCATTACTCATGACAATAATA TTAATATCGTCCAGAGTAAGGAAAACGCTAACGGGGCAACTTCTCTTTCCGTGCCTTCTCTTTTTAGCAGCGTTGACCAAATTACCCAAGACGCAAACGC TGCTTCTGTGGCTGTTGCAAATATGTCGGCGACTGCGTTACTCCAAAAAGCTGCTCAGATGGGAGCGACTTCTTCTACGTCACCAACGACGACGATTACT ACCGACCAATCAGCGTATCTTCAGAGTTTTGCATCGAAGAGTAATCAGATTGTAGAAGATGGTGGCAGCGACAGGTTCTTTGCTTCGTTTGGATCGAACA GTGTCGAGTTAATGAGTAATAATAATAACGGTCTTCACGAGATCGGGAACCCTAGAAACGGCGTTACGGTCGTTTCGGGGATGGGTGAATTACAGAATTA CCCTTGGAAGCGTAGAAGAGTTGATATTGGGAATGCGGGAGGAGGAGGGCAAACTCGGGATTTTCTTGGGGTTGGTGTACAAACAATATGCCATTCTTCC TCTATCAATGGATGGATT >IE_07F06_translated MTTEDQTISSSGGYVQSSSTTDHVDHHHHDQHESLNPPLVKKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQ RTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEE TARLNAASHLKSFAATAGSNLNYHYLMGTLIPSPSLPQPPSFPFGPPQPQHHHHHQFPITTNNFDHQDVMKPASTLSLWSGGNINHHQQVTIEDRMAPQP HSPQEDYNWVFGNANNHGELITTSDSLITHDNNINIVQSKENANGATSLSVPSLFSSVDQITQDANAASVAVANMSATALLQKAAQMGATSSTSPTTTIT TDQSAYLQSFASKSNQIVEDGGSDRFFASFGSNSVELMSNNNNGLHEIGNPRNGVTVVSGMGELQNYPWKRRRVDIGNAGGGGQTRDFLGVGVQTICHSS SINGWI |
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| Alignment |
◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 100%一致しました。 |
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