◆◆◆IE_07H04 detail◆◆◆

Code nameIE_07H04
LocusAT3G61910
TemplateIT_07H04 (CR601)
Donor VectorpDONR207
Forward primerIPF_07H04 (ggggacaagtttgtacaaaaaagcaggcttcATGAACATATCAGTAAACGGACAGTCA)
Reverse primerIPR_07H04 (ggggaccactttgtacaagaaagctgggttTCCACTACCGTTCAACAAGTGGCATGTCGT)
Alignment with template seq.1st配列解析が行えなかったサンプルです。2ndアミノ酸配列100%一致
Alignment with TAIR7CDS-アミノ酸配列100%一致
comment1st:(Sequence解析まで行ったが、読み直す必要がある)
sequence
>IE_07H04_1002bp
ATGAACATATCAGTAAACGGACAGTCACAAGTACCTCCTGGCTTTAGGTTTCACCCAACCGAGGAAGAGCTCTTGAAGTATTACCTCCGCAAGAAAATCT
CTAACATCAAGATCGATCTCGATGTTATTCCTGACATTGATCTCAACAAGCTCGAGCCTTGGGATATTCAAGAGATGTGTAAGATTGGAACGACGCCGCA
AAACGATTGGTACTTTTATAGCCATAAGGACAAGAAGTATCCCACCGGGACTAGAACCAACAGAGCCACCACGGTCGGATTTTGGAAAGCGACGGGACGT
GACAAGACCATATATACCAATGGTGATAGAATCGGGATGCGAAAGACGCTTGTCTTCTACAAAGGTCGAGCCCCTCATGGTCAGAAATCCGATTGGATCA
TGCACGAATATAGACTCGACGAGAGTGTATTAATCTCCTCGTGTGGCGATCATGACGTCAACGTAGAAACGTGTGATGTCATAGGAAGTGACGAAGGATG
GGTGGTGTGTCGTGTTTTCAAGAAAAATAACCTTTGCAAAAACATGATTAGTAGTAGCCCGGCGAGTTCGGTGAAAACGCCGTCGTTCAATGAGGAGACT
ATCGAGCAACTTCTCGAAGTTATGGGGCAATCTTGTAAAGGAGAGATAGTTTTAGACCCTTTCTTAAAACTCCCTAACCTCGAATGCCATAACAACACCA
CCATCACGAGTTATCAGTGGTTAATCGACGACCAAGTCAACAACTGCCACGTCAGCAAAGTTATGGATCCCAGCTTCATCACTAGCTGGGCCGCTTTGGA
TCGGCTCGTTGCCTCACAGTTAAATGGGCCCAACTCGTATTCAATACCAGCCGTTAATGAGACTTCACAATCACCGTATCATGGACTGAACCGGTCCGGT
TGTAATACCGGTTTAACACCAGATTACTATATACCGGAGATTGATTTATGGAACGAGGCAGATTTCGCGAGAACGACATGCCACTTGTTGAACGGTAGTG
GA

>IE_07H04_translated
MNISVNGQSQVPPGFRFHPTEEELLKYYLRKKISNIKIDLDVIPDIDLNKLEPWDIQEMCKIGTTPQNDWYFYSHKDKKYPTGTRTNRATTVGFWKATGR
DKTIYTNGDRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDESVLISSCGDHDVNVETCDVIGSDEGWVVCRVFKKNNLCKNMISSSPASSVKTPSFNEET
IEQLLEVMGQSCKGEIVLDPFLKLPNLECHNNTTITSYQWLIDDQVNNCHVSKVMDPSFITSWAALDRLVASQLNGPNSYSIPAVNETSQSPYHGLNRSG
CNTGLTPDYYIPEIDLWNEADFARTTCHLLNGSG
Alignment CDS(TAIRver.9)_without_stop_codonとのalignment

100%一致しました。

このページのTOPに戻る