◆◆◆IE_08C06(IE_09D01) detail◆◆◆

Code nameIE_08C06(IE_09D01)
LocusAT3G61120
TemplateIT_08C06 (CR413)
Donor VectorpDONR207
Forward primerIPF_08C06 (ggggacaagtttgtacaaaaaagcaggcttcATGGGAAGAGGCAAAGTGGAAGTGAAG)
Reverse primerIPR_08C06 (ggggaccactttgtacaagaaagctgggttTTGGACAAAGTTGGTCTCAGCATCACTTCT)
Alignment with template seq.1stアミノ酸配列6.80%一致2ndアミノ酸配列100%一致
Alignment with TAIR7CDSアミノ酸配列6.80%一致アミノ酸配列100%一致
comment1st:(Sequence解析まで行ったが、フレームがずれる)→2nd(09D01):100%
sequence
>IE_08C06_732bp
ATGGGAAGAGGCAAAGTGGAAGTGAAGAGAATTGAGAACAAGATCACTAGACAAGTAACCTTCTCCAAAAGAAAAAGTGGTTTGCTCAAGAAAGCCTACG
AACTCTCTGTTCTTTGTGATGCAGAGGTTTCTCTCATAATCTTCTCCACCGGTGGCAAGCTCTACGAGTTCAGCAATGTCGGAGTTGGCAGAACCATTGA
GAGGTACTATCGCTGTAAAGACAATCTTTTGGACAATGATACGCTTGAAGATACTCAGGGCTTGCGTCAAGAGGTGACAAAGCTCAAATGCAAATACGAA
TCTCTTCTTCGCACTCATAGGAATTTGGTTGGGGAAGATCTTGAAGGGATGAGTATAAAGGAATTGCAGACGCTGGAGAGACAGCTTGAAGGAGCTCTTT
CCGCAACCCGAAAACAAAAGACGCAGGTTATGATGGAACAAATGGAAGAGCTTCGGAGAAAGGAGAGGGAGCTCGGAGATATAAACAATAAGCTAAAGCT
TGAGACAGAAGATCATGATTTTAAAGGCTTTCAAGACCTACTGCTTAACCCGGTGCTCACCGCCGGTTGTTCCACTGATTTTTCCTTGCAATCAACTCAT
CAAAATTATATATCGGATTGCAACCTTGGATATTTTTTACAGATTGGGTTTCAACAACACTATGAGCAAGGTGAAGGATCTTCGGTGACAAAGAGTAATG
CAAGAAGTGATGCTGAGACCAACTTTGTCCAA

>IE_08C06_translated
MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNVGVGRTIERYYRCKDNLLDNDTLEDTQGLRQEVTKLKCKYE
SLLRTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKLKLETEDHDFKGFQDLLLNPVLTAGCSTDFSLQSTH
QNYISDCNLGYFLQIGFQQHYEQGEGSSVTKSNARSDAETNFVQ
Alignment CDS(TAIRver.9)_without_stop_codonとのalignment

100%一致しました。

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