◆◆◆RE_0047 detail◆◆◆

Code name	RE_0047
Locus	AT1G53910
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment	0422_アミノ酸配列70%以上一致
sequence	>RE_0047_1074bp ATGTGTGGAGGAGCTATAATATCCGATTTCATTCCACCGCCGAGGTCTCGCCGTGTTACTAGCGAGTTTATTTGGCCGGATCTGAAGAAGAATTTGAAAG GATCGAAGAAAAGCTCGAAGAATCGTTCGAATTTCTTCGATTTTGACGCTGAGTTCGAAGCTGATTTCCAAGGTTTCAAAGATGATTCGTCTATCGATTG CGATGATGATTTCGACGTCGGTGATGTTTTCGCCGATGTGAAACCATTCGTTTTCACTTCGACTCCAAAACCCGCCGTCTCCGCCGCTGCGGAAGGTTCA GTTTTTGGTAAGAAAGTTACTGGCTTGGATGGGGACGCTGAGAAATCTGCAAATAGGAAGAGGAAGAATCAGTACCGAGGGATTAGGCAACGTCCTTGGG GAAAATGGGCTGCTGAGATACGTGATCCAAGGGAAGGTGCTAGAATCTGGCTTGGAACGTTCAAGACAGCTGAGGAAGCTGCTAGAGCTTACGATGCTGC AGCGCGGAGAATCCGTGGATCTAAAGCTAAGGTGAATTTCCCTGAAGAAAACATGAAGGCTAATTCTCAGAAACGCTCTGTGAAGGCTAATCTTCAGAAA CCAGTGGCTAAACCTAACCCTAACCCAAGTCCAGCTTTGGTTCAGAACTCGAACATCTCCTTTGAAAATATGTGTTTCATGGAGGAGAAACACCAAGTGA GCAACAACAACAACAACCAGTTTGGGATGACAAACTCCGTTGATGCTGGATGTAATGGGTATCAGTATTTCAGCTCTGACCAGGGTAGTAATTCTTTCGA TTGTTCGGAGTTTGGTTGGAGCGATCAAGCTCCGATAACTCCCGACATCTCTTCTGCGGTTATCAACAACAACAACTCAGCTCTGTTCTTTGAGGAAGCC AATCCAGCTAAGAAGCTCAAGTCTATGGATTTCGAGACACCTTACGACAACACTGAATGGGACGCTTCACTGGATTTCCTCAACGAAGATGCTGTAACGA CTCAGGACAATGGTGCAAACCCTATGGACCTATGGAGTATTGATGAAATTCATTCCATGATTGGAGGAGTCTTC >RE_0047_translated MCGGAIISDFIPPPRSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFKDDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVSAAAEGS VFGKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEENMKANSQKRSVKANLQK PVAKPNPNPSPALVQNSNISFENMCFMEEKHQVSNNNNNQFGMTNSVDAGCNGYQYFSSDQGSNSFDCSEFGWSDQAPITPDISSAVINNNNSALFFEEA NPAKKLKSMDFETPYDNTEWDASLDFLNEDAVTTQDNGANPMDLWSIDEIHSMIGGVF
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1073/1074 (99.9%)（アミノ酸配列で357/358 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G53 ATGTGTGGAGGAGCTATAATATCCGATTTCATTCCACCGCCGAGGTCTCGCCGTGTTACTAGCGAGTTTATTTGGCCGGATCTGAAGAAGAATTTGAAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_004 ATGTGTGGAGGAGCTATAATATCCGATTTCATTCCACCGCCGAGGTCTCGCCGTGTTACTAGCGAGTTTATTTGGCCGGATCTGAAGAAGAATTTGAAAG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G53 GATCGAAGAAAAGCTCGAAGAATCGTTCGAATTTCTTCGATTTTGACGCTGAGTTCGAAGCTGATTTCCAAGGTTTCAAAGATGATTCGTCTATCGATTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_004 GATCGAAGAAAAGCTCGAAGAATCGTTCGAATTTCTTCGATTTTGACGCTGAGTTCGAAGCTGATTTCCAAGGTTTCAAAGATGATTCGTCTATCGATTG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G53 CGATGATGATTTCGACGTCGGTGATGTTTTCGCCGATGTGAAACCATTCGTTTTCACTTCGACTCCAAAACCCGCCGTCTCCGCCGCTGCGGAAGGTTCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_004 CGATGATGATTTCGACGTCGGTGATGTTTTCGCCGATGTGAAACCATTCGTTTTCACTTCGACTCCAAAACCCGCCGTCTCCGCCGCTGCGGAAGGTTCA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G53 GTTTTTGGTAAGAAAGTTACTGGCTTGGATGGGGACGCTGAGAAATCTGCAAATAGGAAGAGGAAGAATCAGTACCGAGGGATTAGGCAACGTCCTTGGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_004 GTTTTTGGTAAGAAAGTTACTGGCTTGGATGGGGACGCTGAGAAATCTGCAAATAGGAAGAGGAAGAATCAGTACCGAGGGATTAGGCAACGTCCTTGGG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G53 GAAAATGGGCTGCTGAGATACGTGATCCAAGGGAAGGTGCTAGAATCTGGCTTGGAACGTTCAAGACAGCTGAGGAAGCTGCTAGAGCTTACGATGCTGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_004 GAAAATGGGCTGCTGAGATACGTGATCCAAGGGAAGGTGCTAGAATCTGGCTTGGAACGTTCAAGACAGCTGAGGAAGCTGCTAGAGCTTACGATGCTGC 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G53 AGCGCGGAGAATCCGTGGATCTAAAGCTAAGGTGAATTTCCCTGAAGAAAACATGAAGGCTAATTCTCAGAAACGCTCTGTGAAGGCTAATCTTCAGAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_004 AGCGCGGAGAATCCGTGGATCTAAAGCTAAGGTGAATTTCCCTGAAGAAAACATGAAGGCTAATTCTCAGAAACGCTCTGTGAAGGCTAATCTTCAGAAA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G53 CCAGTGGCTAAACCTAACCCTAACCCAAGTCCAGCTTTGGTTCAGAACTCGAACATCTCCTTTGAAAATATGTGTTTCATGGAGGAGAAACACCAAGTGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_004 CCAGTGGCTAAACCTAACCCTAACCCAAGTCCAGCTTTGGTTCAGAACTCGAACATCTCCTTTGAAAATATGTGTTTCATGGAGGAGAAACACCAAGTGA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G53 GCAACAACAACAACAACCAGTTTGGGATGACAAACTCCGTTGATGCTGGATGTAATGGGTATCAGTATTTCAGCTCTGACCAGGGTAGTAATTCTTTCGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_004 GCAACAACAACAACAACCAGTTTGGGATGACAAACTCCGTTGATGCTGGATGTAATGGGTATCAGTATTTCAGCTCTGACCAGGGTAGTAATTCTTTCGA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G53 TTGTTCGGAGTTTGGTTGGAGCGATCAAGCTCCGATAACTCCCGACATCTCTTCTGCGGTTATCAACAACAACAACTCAGCTCTGTTCTTTGAGGAAGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_004 TTGTTCGGAGTTTGGTTGGAGCGATCAAGCTCCGATAACTCCCGACATCTCTTCTGCGGTTATCAACAACAACAACTCAGCTCTGTTCTTTGAGGAAGCC 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT1G53 AATCCAGCTAAGAAGCTCAAGTCTATGGATTTCGAGACACCTTACAACAACACTGAATGGGACGCTTCACTGGATTTCCTCAACGAAGATGCTGTAACGA ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_004 AATCCAGCTAAGAAGCTCAAGTCTATGGATTTCGAGACACCTTACGACAACACTGAATGGGACGCTTCACTGGATTTCCTCAACGAAGATGCTGTAACGA 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 AT1G53 CTCAGGACAATGGTGCAAACCCTATGGACCTATGGAGTATTGATGAAATTCATTCCATGATTGGAGGAGTCTTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_004 CTCAGGACAATGGTGCAAACCCTATGGACCTATGGAGTATTGATGAAATTCATTCCATGATTGGAGGAGTCTTC 1010 1020 1030 1040 1050 1060 1070 10 20 30 40 50 60 70 80 90 100 AT1G53 MCGGAIISDFIPPPRSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFKDDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVSAAAEGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_004 MCGGAIISDFIPPPRSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFKDDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVSAAAEGS 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G53 VFGKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEENMKANSQKRSVKANLQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_004 VFGKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEENMKANSQKRSVKANLQK 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G53 PVAKPNPNPSPALVQNSNISFENMCFMEEKHQVSNNNNNQFGMTNSVDAGCNGYQYFSSDQGSNSFDCSEFGWSDQAPITPDISSAVINNNNSALFFEEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_004 PVAKPNPNPSPALVQNSNISFENMCFMEEKHQVSNNNNNQFGMTNSVDAGCNGYQYFSSDQGSNSFDCSEFGWSDQAPITPDISSAVINNNNSALFFEEA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 AT1G53 NPAKKLKSMDFETPYNNTEWDASLDFLNEDAVTTQDNGANPMDLWSIDEIHSMIGGVF :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: RE_004 NPAKKLKSMDFETPYDNTEWDASLDFLNEDAVTTQDNGANPMDLWSIDEIHSMIGGVF 310 320 330 340 350

このページのTOPに戻る