◆◆◆RE_0083 detail◆◆◆

Code name	RE_0083
Locus	AT3G14230
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列98.70%一致
comment	0422_アミノ酸配列70%以上一致/0424_アミノ酸配列70%以上一致
sequence	>RE_0083_1125bp ATGTGTGGAGGAGCTATAATCTCCGATTTCATACCTCCGCCGAGGTCCCTCCGCGTCACTAACGAGTTTATCTGGCCGGATCTGAAAAACAAAGTGAAAG CTTCAAAGAAGAGATCGAATAAGCGATCCGATTTCTTCGATCTTGACGATGATTTCGAAGCTGATTTCCAAGGGTTTAAGGATGACTCGGCTTTTGACTG CGAAGACGATGATGATGTCTTCGTCAATGTTAAGCCTTTCGTCTTCACCGCAACTACTAAGCCCGTAGCTTCCGCTTTCGTCTCCACTGTAGGTTCAGCA TATGCCAAGAAAACTGTAGAGTCCGCTGAGCAAGCTGAGAAATCTTCTAAGAGGAAGAGGAAGAATCAATACCGAGGGATTAGGCAGCGTCCTTGGGGAA AATGGGCTGCGGAGATCCGTGATCCGAGAAAAGGCTCCCGAGAATGGCTTGGAACATTCGACACTGCTGAGGAAGCAGCAAGAGCTTATGATGCTGCAGC ACGCAGAATCCGTGACACGAAAGCTAAGGTGAATTTTCCCGAGGAGAAGAACCCTAGCGTCGTATCCCAGAAACGTCCTAGTGCTAAGACTAATAATCTT CAGAAATCAGTGGCTAAACCAAACAAAAGCGTAACTTTGGTTCAGCAGCCAACACATCTGAGTCAGCAGTACTGCAACAACTCCTTTGACAACTCTTTTG GTGATATGAGTTTCATGGAAGAGAAGCCTCAGATGTACAACAATCAGTTTGGGTTAACAAACTCGTTCGATGCTGGAGGTAACAATGGATACCAGTATTT CAGTTCCGATCAGGGCAGTAACTCCTTCGACTGTTCTGAGTTCGGGTGGAGTGATCACGGCCCTAAAACACCCGAGATCTCTTCAATGCTTGTCAATAAC AACGAAGCATCATTTGTTGAAGAAACCAATGCAGCCAAGAAGCTCAAACCAAACTCTGATGAGTCAGACGATCTGATGGCATACCTTGACAACGCCTTGT GGGACACCCCACTAGAAGTGGAAGCCATGCTTGGCGCAGATGCTGGTGCTGTGACTCAGGAAGAGGAAAACCCAGTGGAGCTATGGAGCTTAGATGAGAT CAATTTCATGCTGGAAGGAGACTTT >RE_0083_translated MCGGAIISDFIPPPRSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFKDDSAFDCEDDDDVFVNVKPFVFTATTKPVASAFVSTVGSA YAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRDTKAKVNFPEEKNPSVVSQKRPSAKTNNL QKSVAKPNKSVTLVQQPTHLSQQYCNNSFDNSFGDMSFMEEKPQMYNNQFGLTNSFDAGGNNGYQYFSSDQGSNSFDCSEFGWSDHGPKTPEISSMLVNN NEASFVEETNAAKKLKPNSDESDDLMAYLDNALWDTPLEVEAMLGADAGAVTQEEENPVELWSLDEINFMLEGDF
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1124/1137 (98.9%)（アミノ酸配列で374/379 (98.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT3G14 ATGTGTGGAGGAGCTATAATCTCCGATTTCATACCTCCGCCGAGGTCCCTCCGCGTCACTAACGAGTTTATCTGGCCGGATCTGAAAAACAAAGTGAAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_008 ATGTGTGGAGGAGCTATAATCTCCGATTTCATACCTCCGCCGAGGTCCCTCCGCGTCACTAACGAGTTTATCTGGCCGGATCTGAAAAACAAAGTGAAAG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G14 CTTCAAAGAAGAGATCGAATAAGCGATCCGATTTCTTCGATCTTGACGATGATTTCGAAGCTGATTTCCAAGGGTTTAAGGATGACTCGGCTTTTGACTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_008 CTTCAAAGAAGAGATCGAATAAGCGATCCGATTTCTTCGATCTTGACGATGATTTCGAAGCTGATTTCCAAGGGTTTAAGGATGACTCGGCTTTTGACTG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G14 CGAAGACGATGATGATGTCTTCGTCAATGTTAAGCCTTTCGTCTTCACCGCAACTACTAAGCCCGTAGCTTCCGCTTTCGTCTCCACTGGTATATATTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_008 CGAAGACGATGATGATGTCTTCGTCAATGTTAAGCCTTTCGTCTTCACCGCAACTACTAAGCCCGTAGCTTCCGCTTTCGTCTCCACT------------ 210 220 230 240 250 260 270 280 310 320 330 340 350 360 370 380 390 400 AT3G14 GTAGGTTCAGCATATGCCAAGAAAACTGTAGAGTCCGCTGAGCAAGCTGAGAAATCTTCTAAGAGGAAGAGGAAGAATCAATACCGAGGGATTAGGCAGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_008 GTAGGTTCAGCATATGCCAAGAAAACTGTAGAGTCCGCTGAGCAAGCTGAGAAATCTTCTAAGAGGAAGAGGAAGAATCAATACCGAGGGATTAGGCAGC 290 300 310 320 330 340 350 360 370 380 410 420 430 440 450 460 470 480 490 500 AT3G14 GTCCTTGGGGAAAATGGGCTGCGGAGATCCGTGATCCGAGAAAAGGCTCCCGAGAATGGCTTGGAACATTCGACACTGCTGAGGAAGCAGCAAGAGCTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_008 GTCCTTGGGGAAAATGGGCTGCGGAGATCCGTGATCCGAGAAAAGGCTCCCGAGAATGGCTTGGAACATTCGACACTGCTGAGGAAGCAGCAAGAGCTTA 390 400 410 420 430 440 450 460 470 480 510 520 530 540 550 560 570 580 590 600 AT3G14 TGATGCTGCAGCACGCAGAATCCGTGGCACGAAAGCTAAGGTGAATTTTCCCGAGGAGAAGAACCCTAGCGTCGTATCCCAGAAACGTCCTAGTGCTAAG :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_008 TGATGCTGCAGCACGCAGAATCCGTGACACGAAAGCTAAGGTGAATTTTCCCGAGGAGAAGAACCCTAGCGTCGTATCCCAGAAACGTCCTAGTGCTAAG 490 500 510 520 530 540 550 560 570 580 610 620 630 640 650 660 670 680 690 700 AT3G14 ACTAATAATCTTCAGAAATCAGTGGCTAAACCAAACAAAAGCGTAACTTTGGTTCAGCAGCCAACACATCTGAGTCAGCAGTACTGCAACAACTCCTTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_008 ACTAATAATCTTCAGAAATCAGTGGCTAAACCAAACAAAAGCGTAACTTTGGTTCAGCAGCCAACACATCTGAGTCAGCAGTACTGCAACAACTCCTTTG 590 600 610 620 630 640 650 660 670 680 710 720 730 740 750 760 770 780 790 800 AT3G14 ACAACTCTTTTGGTGATATGAGTTTCATGGAAGAGAAGCCTCAGATGTACAACAATCAGTTTGGGTTAACAAACTCGTTCGATGCTGGAGGTAACAATGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_008 ACAACTCTTTTGGTGATATGAGTTTCATGGAAGAGAAGCCTCAGATGTACAACAATCAGTTTGGGTTAACAAACTCGTTCGATGCTGGAGGTAACAATGG 690 700 710 720 730 740 750 760 770 780 810 820 830 840 850 860 870 880 890 900 AT3G14 ATACCAGTATTTCAGTTCCGATCAGGGCAGTAACTCCTTCGACTGTTCTGAGTTCGGGTGGAGTGATCACGGCCCTAAAACACCCGAGATCTCTTCAATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_008 ATACCAGTATTTCAGTTCCGATCAGGGCAGTAACTCCTTCGACTGTTCTGAGTTCGGGTGGAGTGATCACGGCCCTAAAACACCCGAGATCTCTTCAATG 790 800 810 820 830 840 850 860 870 880 910 920 930 940 950 960 970 980 990 1000 AT3G14 CTTGTCAATAACAACGAAGCATCATTTGTTGAAGAAACCAATGCAGCCAAGAAGCTCAAACCAAACTCTGATGAGTCAGACGATCTGATGGCATACCTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_008 CTTGTCAATAACAACGAAGCATCATTTGTTGAAGAAACCAATGCAGCCAAGAAGCTCAAACCAAACTCTGATGAGTCAGACGATCTGATGGCATACCTTG 890 900 910 920 930 940 950 960 970 980 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT3G14 ACAACGCCTTGTGGGACACCCCACTAGAAGTGGAAGCCATGCTTGGCGCAGATGCTGGTGCTGTGACTCAGGAAGAGGAAAACCCAGTGGAGCTATGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_008 ACAACGCCTTGTGGGACACCCCACTAGAAGTGGAAGCCATGCTTGGCGCAGATGCTGGTGCTGTGACTCAGGAAGAGGAAAACCCAGTGGAGCTATGGAG 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1110 1120 1130 AT3G14 CTTAGATGAGATCAATTTCATGCTGGAAGGAGACTTT ::::::::::::::::::::::::::::::::::::: RE_008 CTTAGATGAGATCAATTTCATGCTGGAAGGAGACTTT 1090 1100 1110 1120 10 20 30 40 50 60 70 80 90 100 AT3G14 MCGGAIISDFIPPPRSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFKDDSAFDCEDDDDVFVNVKPFVFTATTKPVASAFVSTGIYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_008 MCGGAIISDFIPPPRSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFKDDSAFDCEDDDDVFVNVKPFVFTATTKPVASAFVST---- 10 20 30 40 50 60 70 80 90 110 120 130 140 150 160 170 180 190 200 AT3G14 VGSAYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPEEKNPSVVSQKRPSAK ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::: RE_008 VGSAYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRDTKAKVNFPEEKNPSVVSQKRPSAK 100 110 120 130 140 150 160 170 180 190 210 220 230 240 250 260 270 280 290 300 AT3G14 TNNLQKSVAKPNKSVTLVQQPTHLSQQYCNNSFDNSFGDMSFMEEKPQMYNNQFGLTNSFDAGGNNGYQYFSSDQGSNSFDCSEFGWSDHGPKTPEISSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_008 TNNLQKSVAKPNKSVTLVQQPTHLSQQYCNNSFDNSFGDMSFMEEKPQMYNNQFGLTNSFDAGGNNGYQYFSSDQGSNSFDCSEFGWSDHGPKTPEISSM 200 210 220 230 240 250 260 270 280 290 310 320 330 340 350 360 370 AT3G14 LVNNNEASFVEETNAAKKLKPNSDESDDLMAYLDNALWDTPLEVEAMLGADAGAVTQEEENPVELWSLDEINFMLEGDF ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_008 LVNNNEASFVEETNAAKKLKPNSDESDDLMAYLDNALWDTPLEVEAMLGADAGAVTQEEENPVELWSLDEINFMLEGDF 300 310 320 330 340 350 360 370

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