◆◆◆RE_0091 detail◆◆◆

Code name	RE_0091
Locus	AT3G25730
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.40%一致
comment	0420_アミノ酸配列70%以上一致
sequence	>RE_0091_999bp ATGGATGCCATGAGTAGCGTAGACGAGAGCTCTACAACTACAGATTCCATTCTGGCGAGAAAGTCATCGTCTCCGGCGAGTTTACTATATAGAATGGGAA GCGGAACAAGCGTGGTACTTGATTCAGAGAACGGTGTCGAAGTCGAAGTCGAAGCCGAATCAAGAAAGCTTCCTTCTTCAAGATTCAAAGGTGTTGTTCC TCAACCAAATGGAAGATGGGGAGCTCAGATTTACGAGAAACATCAACGCGTGTGGCTTGGTACTTTCAACGAGGAAGACGAAGCAGCTCGTGCTTACGAC GTCGCGGCTCACCGTTTCCGTGGCCGCGATGCCGTTACTAATTTCAAAGACACGACGTTCGAAGAAGAGGTTGAGTTCTTAAACGCGCATTCGAAATCAG AGATCGTAGATATGTTGAGAAAACACACTTACAAAGAAGAGTTAGACCAAAGGAAACGTAACCGTGACGGTAACGGAAAAGAGACGACGGCGTTTGCTTT GGCTTCGATGGTGGTTATGACGGGGTTTAAAACGGCGGAGTTACTGTTTGAGAAAACGGTAACGCCAAGTGACGTCGGGAAACTAAACCGTTTAGTTATA CCAAAACACCAAGCGGAGAAACATTTTCCGTTACCGTTAGGTAATAATAACGTCTCCGTTAAAGGTATGCTGTTGAATTTCGAAGACGTTAACGGGAAAG TGTGGAGGTTCCGTTACTCTTATTGGAATAGTAGTCAAAGTTATGTGTTGACCAAAGGTTGGAGTAGATTCGTTAAAGAGAAGAGACTTTGTGCTGGTGA TTTGATCAGTTTTAAAAGATCCAACGATCAAGATCAAAAATTCTTTATCGGGTGGAAATCGAAATCCGGGTTGGATCTAGAGACGGGTCGGGTTATGAGA TTGTTTGGGGTTGATATTTCTTTAAACGCCGTCGTTGTAGTGAAGGAAACAATGGAGGTGTTAATGTCGTCGTTAAGGTGTAAGAAGCAACGAGTTTTG >RE_0091_translated MDAMSSVDESSTTTDSILARKSSSPASLLYRMGSGTSVVLDSENGVEVEVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYD VAAHRFRGRDAVTNFKDTTFEEEVEFLNAHSKSEIVDMLRKHTYKEELDQRKRNRDGNGKETTAFALASMVVMTGFKTAELLFEKTVTPSDVGKLNRLVI PKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWKSKSGLDLETGRVMR LFGVDISLNAVVVVKETMEVLMSSLRCKKQRVL
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 997/999 (99.8%)（アミノ酸配列で331/333 (99.4%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT3G25 ATGGATGCCATGAGTAGCGTAGACGAGAGCTCTACAACTACAGATTCCATTCCGGCGAGAAAGTCATCGTCTCCGGCGAGTTTACTATATAGAATGGGAA :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::: RE_009 ATGGATGCCATGAGTAGCGTAGACGAGAGCTCTACAACTACAGATTCCATTCTGGCGAGAAAGTCATCGTCTCCGGCGAGTTTACTATATAGAATGGGAA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G25 GCGGAACAAGCGTGGTACTTGATTCAGAGAACGGTGTCGAAGTCGAAGTCGAAGCCGAATCAAGAAAGCTTCCTTCTTCAAGATTCAAAGGTGTTGTTCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_009 GCGGAACAAGCGTGGTACTTGATTCAGAGAACGGTGTCGAAGTCGAAGTCGAAGCCGAATCAAGAAAGCTTCCTTCTTCAAGATTCAAAGGTGTTGTTCC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G25 TCAACCAAATGGAAGATGGGGAGCTCAGATTTACGAGAAACATCAACGCGTGTGGCTTGGTACTTTCAACGAGGAAGACGAAGCAGCTCGTGCTTACGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_009 TCAACCAAATGGAAGATGGGGAGCTCAGATTTACGAGAAACATCAACGCGTGTGGCTTGGTACTTTCAACGAGGAAGACGAAGCAGCTCGTGCTTACGAC 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT3G25 GTCGCGGCTCACCGTTTCCGTGGCCGCGATGCCGTTACTAATTTCAAAGACACGACGTTCGAAGAAGAGGTTGAGTTCTTAAACGCGCATTCGAAATCAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_009 GTCGCGGCTCACCGTTTCCGTGGCCGCGATGCCGTTACTAATTTCAAAGACACGACGTTCGAAGAAGAGGTTGAGTTCTTAAACGCGCATTCGAAATCAG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT3G25 AGATCGTAGATATGTTGAGAAAACACACTTACAAAGAAGAGTTAGACCAAAGGAAACGTAACCGTGACGGTAACGGAAAAGAGACGACGGCGTTTGCTTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_009 AGATCGTAGATATGTTGAGAAAACACACTTACAAAGAAGAGTTAGACCAAAGGAAACGTAACCGTGACGGTAACGGAAAAGAGACGACGGCGTTTGCTTT 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT3G25 GGCTTCGATGGTGGTTATGACGGGGTTTAAAACGGCGGAGTTACTGTTTGAGAAAACGGTAACGCCAAGTGACGTCGGGAAACTAAACCGTTTAGTTATA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_009 GGCTTCGATGGTGGTTATGACGGGGTTTAAAACGGCGGAGTTACTGTTTGAGAAAACGGTAACGCCAAGTGACGTCGGGAAACTAAACCGTTTAGTTATA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT3G25 CCAAAACACCAAGCGGAGAAACATTTTCCGTTACCGTTAGGTAATAATAACGTCTCCGTTAAAGGTATGCTGTTGAATTTCGAAGACGTTAACGGGAAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_009 CCAAAACACCAAGCGGAGAAACATTTTCCGTTACCGTTAGGTAATAATAACGTCTCCGTTAAAGGTATGCTGTTGAATTTCGAAGACGTTAACGGGAAAG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT3G25 TGTGGAGGTTCCGTTACTCTTATTGGAATAGTAGTCAAAGTTATGTGTTGACCAAAGGTTGGAGTAGATTCGTTAAAGAGAAGAGACTTTGTGCTGGTGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_009 TGTGGAGGTTCCGTTACTCTTATTGGAATAGTAGTCAAAGTTATGTGTTGACCAAAGGTTGGAGTAGATTCGTTAAAGAGAAGAGACTTTGTGCTGGTGA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT3G25 TTTGATCAGTTTTAAAAGATCCAACGATCAAGATCAAAAATTCTTTATCGGGTGGAAATCGAAATCCGGGTTGGATCTAGAGACGGGTCGGGTTATGAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_009 TTTGATCAGTTTTAAAAGATCCAACGATCAAGATCAAAAATTCTTTATCGGGTGGAAATCGAAATCCGGGTTGGATCTAGAGACGGGTCGGGTTATGAGA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 AT3G25 TTGTTTGGGGTTGATATTTCTTTAAACGCCGTCGTTGTAGTGAAGGAAACAACGGAGGTGTTAATGTCGTCGTTAAGGTGTAAGAAGCAACGAGTTTTG :::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::: RE_009 TTGTTTGGGGTTGATATTTCTTTAAACGCCGTCGTTGTAGTGAAGGAAACAATGGAGGTGTTAATGTCGTCGTTAAGGTGTAAGAAGCAACGAGTTTTG 910 920 930 940 950 960 970 980 990 10 20 30 40 50 60 70 80 90 100 AT3G25 MDAMSSVDESSTTTDSIPARKSSSPASLLYRMGSGTSVVLDSENGVEVEVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYD ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_009 MDAMSSVDESSTTTDSILARKSSSPASLLYRMGSGTSVVLDSENGVEVEVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYD 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G25 VAAHRFRGRDAVTNFKDTTFEEEVEFLNAHSKSEIVDMLRKHTYKEELDQRKRNRDGNGKETTAFALASMVVMTGFKTAELLFEKTVTPSDVGKLNRLVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_009 VAAHRFRGRDAVTNFKDTTFEEEVEFLNAHSKSEIVDMLRKHTYKEELDQRKRNRDGNGKETTAFALASMVVMTGFKTAELLFEKTVTPSDVGKLNRLVI 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G25 PKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWKSKSGLDLETGRVMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_009 PKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWKSKSGLDLETGRVMR 210 220 230 240 250 260 270 280 290 300 310 320 330 AT3G25 LFGVDISLNAVVVVKETTEVLMSSLRCKKQRVL ::::::::::::::::: ::::::::::::::: RE_009 LFGVDISLNAVVVVKETMEVLMSSLRCKKQRVL 310 320 330

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