◆◆◆RE_0135 detail◆◆◆

Code name	RE_0135
Locus	AT5G47230
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment	0229_アミノ酸配列70%以上一致
sequence	>RE_0135_900bp ATGGCGACTCCTAACGAAGTATCTGCACTTTGGTTCATCGAGAAACATCTACTCGACGAGGCTTCTCCTGTGGCTACAGATCCATGGATGAAGCACGAAT CATCATCAGCAACAGAATCTAGCTCTGACTCTTCTTCTATCATCTTCGGATCATCGTCCTCTTCTTTCGCCCCAATTGATTTCTCTGAATCCGTATGCAA ACCTGAAATCATCGATCTCGATACTCCCAGATCTATGGAATTTCTATCGATTCCATTTGAATTTGACTCAGAAGTTTCTGTTTCTGATTTCGATTTTAAA CCTTCTAATCAAAATCAAAATCAGTTTGAACCGGAGCTTAAATCTCAAATTCGTAAACCGCCATTGAAGATTTCGCTTCCAGCTAAAACAGAGTGGATTC AATTCGCAGCTGAAAACACCAAACCGGAAGTTACTAAACCGGTTTCGGAAGAAGAGAAGAAGCATTACAGAGGAGTAAGACAAGGACCGTGGGGGAAATT CGCGGCGGAGATTCGTGACCCGAATAAACGCGGATCTCGCGTTTGGCTTGGGACGTTTGATACAGCGATTGAAGCGGCTAGAGCTTATGACGAAGCAGCG TTTAGACTACGAGGATCGAAAGCGATTTTGAATTTCCCTCTTGAAGTTGGGAAGTGGAAACCACGCGCCGATGAAGGTGAGAAGAAACGGAAGAGAGACG ATGATGAGAAAGTGACTGTGGTTGAGAAAGTGTTGAAGACGGAACAGAGCGTTGACGTTAACGGTGGAGAGACGTTTCCGTTTGTAACGTCGAATTTAAC GGAATTATGTGACTGGGATTTAACGGGGTTTCTTAACTTTCCGCTTCTGTCGCCGTTATCTCCTCATCCACCGTTTGGTTATTCCCAGTTGACCGTTGTT >RE_0135_translated MATPNEVSALWFIEKHLLDEASPVATDPWMKHESSSATESSSDSSSIIFGSSSSSFAPIDFSESVCKPEIIDLDTPRSMEFLSIPFEFDSEVSVSDFDFK PSNQNQNQFEPELKSQIRKPPLKISLPAKTEWIQFAAENTKPEVTKPVSEEEKKHYRGVRQGPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAA FRLRGSKAILNFPLEVGKWKPRADEGEKKRKRDDDEKVTVVEKVLKTEQSVDVNGGETFPFVTSNLTELCDWDLTGFLNFPLLSPLSPHPPFGYSQLTVV
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 899/900 (99.9%)（アミノ酸配列で299/300 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT5G47 ATGGCGACTCCTAACGAAGTATCTGCACTTTGGTTCATCGAGAAACATCTACTCGACGAGGCTTCTCCTGTGGCTACAGATCCATGGATGAAGCACGAAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_013 ATGGCGACTCCTAACGAAGTATCTGCACTTTGGTTCATCGAGAAACATCTACTCGACGAGGCTTCTCCTGTGGCTACAGATCCATGGATGAAGCACGAAT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G47 CATCATCAGCAACAGAATCTAGCTCTGACTCTTCTTCTATCATCTTCGGATCATCGTCCTCTTCTTTCGCCCCAATTGATTTCTCTGAATCCGTATGCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_013 CATCATCAGCAACAGAATCTAGCTCTGACTCTTCTTCTATCATCTTCGGATCATCGTCCTCTTCTTTCGCCCCAATTGATTTCTCTGAATCCGTATGCAA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G47 ACCTGAAATCATCGATCTCGATACTCCCAGATCTATGGAATTTCTATCGATTCCATTTGAATTTGACTCAGAAGTTTCTGTTTCTGATTTCGATTTTAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_013 ACCTGAAATCATCGATCTCGATACTCCCAGATCTATGGAATTTCTATCGATTCCATTTGAATTTGACTCAGAAGTTTCTGTTTCTGATTTCGATTTTAAA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT5G47 CCTTCTAATCAAAATCAAAATCAGTTTGAACCGGAGCTTAAATCTCAAATTCGTAAACCGCCATTGAAGATTTCGCTTCCAGCTAAAACAGAGTGGATTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_013 CCTTCTAATCAAAATCAAAATCAGTTTGAACCGGAGCTTAAATCTCAAATTCGTAAACCGCCATTGAAGATTTCGCTTCCAGCTAAAACAGAGTGGATTC 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT5G47 AATTCGCAGCTGAAAACACCAAACCGGAAGTTACTAAACCGGTTTCGGAAGAAGAGAAGAAGCATTACAGAGGAGTAAGACAAAGACCGTGGGGGAAATT ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::: RE_013 AATTCGCAGCTGAAAACACCAAACCGGAAGTTACTAAACCGGTTTCGGAAGAAGAGAAGAAGCATTACAGAGGAGTAAGACAAGGACCGTGGGGGAAATT 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT5G47 CGCGGCGGAGATTCGTGACCCGAATAAACGCGGATCTCGCGTTTGGCTTGGGACGTTTGATACAGCGATTGAAGCGGCTAGAGCTTATGACGAAGCAGCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_013 CGCGGCGGAGATTCGTGACCCGAATAAACGCGGATCTCGCGTTTGGCTTGGGACGTTTGATACAGCGATTGAAGCGGCTAGAGCTTATGACGAAGCAGCG 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT5G47 TTTAGACTACGAGGATCGAAAGCGATTTTGAATTTCCCTCTTGAAGTTGGGAAGTGGAAACCACGCGCCGATGAAGGTGAGAAGAAACGGAAGAGAGACG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_013 TTTAGACTACGAGGATCGAAAGCGATTTTGAATTTCCCTCTTGAAGTTGGGAAGTGGAAACCACGCGCCGATGAAGGTGAGAAGAAACGGAAGAGAGACG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT5G47 ATGATGAGAAAGTGACTGTGGTTGAGAAAGTGTTGAAGACGGAACAGAGCGTTGACGTTAACGGTGGAGAGACGTTTCCGTTTGTAACGTCGAATTTAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_013 ATGATGAGAAAGTGACTGTGGTTGAGAAAGTGTTGAAGACGGAACAGAGCGTTGACGTTAACGGTGGAGAGACGTTTCCGTTTGTAACGTCGAATTTAAC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT5G47 GGAATTATGTGACTGGGATTTAACGGGGTTTCTTAACTTTCCGCTTCTGTCGCCGTTATCTCCTCATCCACCGTTTGGTTATTCCCAGTTGACCGTTGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_013 GGAATTATGTGACTGGGATTTAACGGGGTTTCTTAACTTTCCGCTTCTGTCGCCGTTATCTCCTCATCCACCGTTTGGTTATTCCCAGTTGACCGTTGTT 810 820 830 840 850 860 870 880 890 900 10 20 30 40 50 60 70 80 90 100 AT5G47 MATPNEVSALWFIEKHLLDEASPVATDPWMKHESSSATESSSDSSSIIFGSSSSSFAPIDFSESVCKPEIIDLDTPRSMEFLSIPFEFDSEVSVSDFDFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_013 MATPNEVSALWFIEKHLLDEASPVATDPWMKHESSSATESSSDSSSIIFGSSSSSFAPIDFSESVCKPEIIDLDTPRSMEFLSIPFEFDSEVSVSDFDFK 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G47 PSNQNQNQFEPELKSQIRKPPLKISLPAKTEWIQFAAENTKPEVTKPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: RE_013 PSNQNQNQFEPELKSQIRKPPLKISLPAKTEWIQFAAENTKPEVTKPVSEEEKKHYRGVRQGPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G47 FRLRGSKAILNFPLEVGKWKPRADEGEKKRKRDDDEKVTVVEKVLKTEQSVDVNGGETFPFVTSNLTELCDWDLTGFLNFPLLSPLSPHPPFGYSQLTVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_013 FRLRGSKAILNFPLEVGKWKPRADEGEKKRKRDDDEKVTVVEKVLKTEQSVDVNGGETFPFVTSNLTELCDWDLTGFLNFPLLSPLSPHPPFGYSQLTVV 210 220 230 240 250 260 270 280 290 300

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