◆◆◆RE_0190 detail◆◆◆

Code name	RE_0190
Locus	AT5G65670
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列95.00%一致
comment	0420_アミノ酸配列70%以上一致
sequence	>RE_0190_969bp ATGTCCCCGGAAGAGGAGCTACAGAGCAATGTATCGGTGGCTAGTTCTTCACCTACTAGCAATTGCATCTCCAGGAACACTCTAGGAGGACTTAAAGAGC ATAACTACTTGGGTCTCTCTGATTGTTCTTCTGTTGGAAGCTCTACTCTCTCTCCCCTTGCTGAAGATGACAAAGCTACTATCAGCCTCAAGGCTACGGA GCTGACACTTGGTCTTCCTGGATCACAATCTCCTGCGAGAGACACAGAGCTTAACCTTTTGAGCCCAGCAAAGCTAGATGAGAAGCCATTCTTTCCTTTG CTTCCTTCTAAAGATGAGATATGCTCCTCCTCGCAAAAGAACAATGCATCGGGAAACAAAAGAGGCTTTTCTGACACAATGGATCAGTTTGCTGAAGCTA AAAGTTCAGTGTATACTGAGAAAAACTGGATGTTCCCTGAAGCAGCAGCCACCCAGTCTGTAACAAAGAAAGATGTGCCACAAAACATACCCAAAGGACA GTCTAGCACTACAAACAATAGCTCTAGTCCACCTGCAGCCAAGGCACAAATTGTCAGTTGGCCTCCAGTGAGATCCTACAGGAAGAACACATTGGCCACT ACTTGTAAGAACAGTGACGAAGTTGATGGGAGGCCAGGTTCTGGGGCTCTCTTCGTGAAGGTCAGTATGGATGGTGCTCCTTATCTGAGGAAAGTTGACC TGAGGAGCTACACTAACTACGGGGAGCTTTCTTCAGCCTTGGAGAAAATGTTCACCACTTTCACTCTTGGTCAATGTGGATCTAATGGAGCTGCTGGGAA GGATATGCTTAGTGAGACCAAGCTCAAGGATCTTTTGAATGGAAAAGACTATGTGCTCACTTATGAGGATAATGATGGTGACTGGATGCTTGTTGGAGAT GTTCCGTGGGAGATGTTTATTGATGTCTGCAAGAAGCTGAAGATAATGAAAGGGTGTGATGCTATTGGG >RE_0190_translated MSPEEELQSNVSVASSSPTSNCISRNTLGGLKEHNYLGLSDCSSVGSSTLSPLAEDDKATISLKATELTLGLPGSQSPARDTELNLLSPAKLDEKPFFPL LPSKDEICSSSQKNNASGNKRGFSDTMDQFAEAKSSVYTEKNWMFPEAAATQSVTKKDVPQNIPKGQSSTTNNSSSPPAAKAQIVSWPPVRSYRKNTLAT TCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDNDGDWMLVGD VPWEMFIDVCKKLKIMKGCDAIG
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 967/1014 (95.4%)（アミノ酸配列で321/338 (95.0%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT5G65 ATGTCCCCGGAAGAGGAGCTACAGAGCAATGTATCGGTGGCTAGTTCTTCACCTACTAGCAATTGCATCTCCAGGAACACTCTAGGAGGACTTAAAGAGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_019 ATGTCCCCGGAAGAGGAGCTACAGAGCAATGTATCGGTGGCTAGTTCTTCACCTACTAGCAATTGCATCTCCAGGAACACTCTAGGAGGACTTAAAGAGC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G65 ATAACTACTTGGGTCTCTCTGATTGTTCTTCTGTTGGAAGCTCTACTCTCTCTCCCCTTGCTGAAGATGACAAAGCTACTATCAGCCTCAAGGCTACGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_019 ATAACTACTTGGGTCTCTCTGATTGTTCTTCTGTTGGAAGCTCTACTCTCTCTCCCCTTGCTGAAGATGACAAAGCTACTATCAGCCTCAAGGCTACGGA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G65 GCTGACACTTGGTCTTCCTGGATCACAATCTCCTGCGAGAGACACAGAGCTTAACCTTTTGAGCCCAGCAAAGCTAGATGAGAAGCCATTCTTTCCTTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_019 GCTGACACTTGGTCTTCCTGGATCACAATCTCCTGCGAGAGACACAGAGCTTAACCTTTTGAGCCCAGCAAAGCTAGATGAGAAGCCATTCTTTCCTTTG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT5G65 CTTCCTTCTAAAGATGAGATATGCTCCTCCTCGCAAAAGAACAATGCATCGGGAAACAAAAGAGGCTTTTCTGACACAATGGATCAGTTTGCTGAAGCTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_019 CTTCCTTCTAAAGATGAGATATGCTCCTCCTCGCAAAAGAACAATGCATCGGGAAACAAAAGAGGCTTTTCTGACACAATGGATCAGTTTGCTGAAGCTA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT5G65 AAAGTTCAGTGTATACTGAGAAAAACTGGATGTTCCCTGAAGCAGCAGCCACCCAGTCTGTAACAAAGAAAGATGTGCCACAAAACATACCCAAAGGACA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_019 AAAGTTCAGTGTATACTGAGAAAAACTGGATGTTCCCTGAAGCAGCAGCCACCCAGTCTGTAACAAAGAAAGATGTGCCACAAAACATACCCAAAGGACA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT5G65 GTCTAGCACTACAAACAATAGCTCTAGTCCACCTGCAGCCAAGGCACAAATTGTCGGTTGGCCTCCAGTGAGATCCTACAGGAAGAACACATTGGCCACT ::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: RE_019 GTCTAGCACTACAAACAATAGCTCTAGTCCACCTGCAGCCAAGGCACAAATTGTCAGTTGGCCTCCAGTGAGATCCTACAGGAAGAACACATTGGCCACT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT5G65 ACTTGTAAGAACAGTGACGAAGTTGATGGGAGGCCAGGTTCTGGGGCTCTCTTCGTGAAGGTCAGTATGGATGGTGCTCCTTATCTGAGGAAAGTTGACC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_019 ACTTGTAAGAACAGTGACGAAGTTGATGGGAGGCCAGGTTCTGGGGCTCTCTTCGTGAAGGTCAGTATGGATGGTGCTCCTTATCTGAGGAAAGTTGACC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT5G65 TGAGGAGCTACACTAACTACGGGGAGCTTTCTTCAGCCTTGGAGAAAATGTTCACCACTTTCACTCTTGGTCAATGTGGATCTAATGGAGCTGCTGGGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_019 TGAGGAGCTACACTAACTACGGGGAGCTTTCTTCAGCCTTGGAGAAAATGTTCACCACTTTCACTCTTGGTCAATGTGGATCTAATGGAGCTGCTGGGAA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT5G65 GGATATGCTTAGTGAGACCAAGCTCAAGGATCTTTTGAATGGAAAAGACTATGTGCTCACTTATGAGGATAAGGATGGTGACTGGATGCTTGTTGGAGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::: RE_019 GGATATGCTTAGTGAGACCAAGCTCAAGGATCTTTTGAATGGAAAAGACTATGTGCTCACTTATGAGGATAATGATGGTGACTGGATGCTTGTTGGAGAT 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT5G65 GTTCCGTGGGAGATGTTTATTGATGTCTGCAAGAAGCTGAAGATAATGAAAGGGTGTGATGCTATTGGGTTAGCTGCAGCTCCGAGAGCAATGGAGAAAT ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_019 GTTCCGTGGGAGATGTTTATTGATGTCTGCAAGAAGCTGAAGATAATGAAAGGGTGTGATGCTATTGGG------------------------------- 910 920 930 940 950 960 1010 AT5G65 CGAAGATGAGAGCT RE_019 -------------- 10 20 30 40 50 60 70 80 90 100 AT5G65 MSPEEELQSNVSVASSSPTSNCISRNTLGGLKEHNYLGLSDCSSVGSSTLSPLAEDDKATISLKATELTLGLPGSQSPARDTELNLLSPAKLDEKPFFPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_019 MSPEEELQSNVSVASSSPTSNCISRNTLGGLKEHNYLGLSDCSSVGSSTLSPLAEDDKATISLKATELTLGLPGSQSPARDTELNLLSPAKLDEKPFFPL 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G65 LPSKDEICSSSQKNNASGNKRGFSDTMDQFAEAKSSVYTEKNWMFPEAAATQSVTKKDVPQNIPKGQSSTTNNSSSPPAAKAQIVGWPPVRSYRKNTLAT ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::: RE_019 LPSKDEICSSSQKNNASGNKRGFSDTMDQFAEAKSSVYTEKNWMFPEAAATQSVTKKDVPQNIPKGQSSTTNNSSSPPAAKAQIVSWPPVRSYRKNTLAT 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G65 TCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: RE_019 TCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDNDGDWMLVGD 210 220 230 240 250 260 270 280 290 300 310 320 330 AT5G65 VPWEMFIDVCKKLKIMKGCDAIGLAAAPRAMEKSKMRA ::::::::::::::::::::::: RE_019 VPWEMFIDVCKKLKIMKGCDAIG--------------- 310 320

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