| Code name | RE_0194 | |||
|---|---|---|---|---|
| Locus | AT1G05710 | |||
| Forward primer | ||||
| Reverse primer | ||||
| Alignment with TAIR7CDS | アミノ酸配列99.30%一致 | |||
| comment | 0115_アミノ酸配列70%以上一致 | |||
| sequence |
>RE_0194_447bp ATGGAATTCTCTAGAGACGCTGGAATGATGATGGAGAATAAGCGGAATGTCTGCTCTCTCGGAGAAAGCAGTATCAAACGCCACAAGTCTGATCTCTCTT TCAGTTCCAAGGAGAGGAAGGACAAGGTTGGAGAACGTATTTCAGCTCTTCAACAAATAGTTTCCCCTTATGGAAAGACCGACACTGCATCAGTTCTTCT AGACGCGATGCATTACATAGAGTTTCTTCACGAACAAGTGAAGGTGCTAAGTGCTCCGTATCTGCAAACGGTACCTGATGCTACGCAGGAGGAGCTGGAG CAGTACAGCCTGAGAAACAGAGGATTATGTCTTGTTCCAATGGAGAATACAGTTGGAGTTGCTCAAAGCAACGGCGCTGATATATGGGCGCCCGTGAAGA CTCCTCTATCACCAGCTTTCAGTGTCACATCTCAATCACCCTTTAAA >RE_0194_translated MEFSRDAGMMMENKRNVCSLGESSIKRHKSDLSFSSKERKDKVGERISALQQIVSPYGKTDTASVLLDAMHYIEFLHEQVKVLSAPYLQTVPDATQEELE QYSLRNRGLCLVPMENTVGVAQSNGADIWAPVKTPLSPAFSVTSQSPFK |
|||
| Alignment |
◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 446/447 (99.8%)（アミノ酸配列で148/149 (99.3%)）一致しました。
10 20 30 40 50 60 70 80 90 100
AT1G05 ATGGAATTCTCTAGAGACGCTGGAATGATGATGGAGAATAAGCGGAATGTCTGCTCTCTCGGAGAAAGCAGTATCAAACGCCACAAGTCTGATCTCTCTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_019 ATGGAATTCTCTAGAGACGCTGGAATGATGATGGAGAATAAGCGGAATGTCTGCTCTCTCGGAGAAAGCAGTATCAAACGCCACAAGTCTGATCTCTCTT
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT1G05 TCAGTTCCAAGGAGAGGAAGGACAAGGTTGGAGAACGTATTTCAGCTCTTCAACAAATAGTTTCCCCTTATGGAAAGACCGACACTGCATCAGTTCTTCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_019 TCAGTTCCAAGGAGAGGAAGGACAAGGTTGGAGAACGTATTTCAGCTCTTCAACAAATAGTTTCCCCTTATGGAAAGACCGACACTGCATCAGTTCTTCT
110 120 130 140 150 160 170 180 190 200
210 220 230 240 250 260 270 280 290 300
AT1G05 AGACGCGATGCATTACATAGAGTTTCTTCACGAACAAGTGAAGGTGCTAAGTGCTCCGTATCTGCAAACGGTACCTGATGCTACGCAGGAGGAGCTGGAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_019 AGACGCGATGCATTACATAGAGTTTCTTCACGAACAAGTGAAGGTGCTAAGTGCTCCGTATCTGCAAACGGTACCTGATGCTACGCAGGAGGAGCTGGAG
210 220 230 240 250 260 270 280 290 300
310 320 330 340 350 360 370 380 390 400
AT1G05 CAGTACAGCCTGAGAAACAGAGGATTATGTCTTGTTCCAATGGAGAATACAGTTGGAGTTGCTCAAAGCAACGGCGCTGATATATGGGCGCCCGTGAAGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_019 CAGTACAGCCTGAGAAACAGAGGATTATGTCTTGTTCCAATGGAGAATACAGTTGGAGTTGCTCAAAGCAACGGCGCTGATATATGGGCGCCCGTGAAGA
310 320 330 340 350 360 370 380 390 400
410 420 430 440
AT1G05 CTCCTCTATCACCAGCTTTCAGTGTCACATCTCAATCACCCTTTAGA
::::::::::::::::::::::::::::::::::::::::::::: :
RE_019 CTCCTCTATCACCAGCTTTCAGTGTCACATCTCAATCACCCTTTAAA
410 420 430 440
10 20 30 40 50 60 70 80 90 100
AT1G05 MEFSRDAGMMMENKRNVCSLGESSIKRHKSDLSFSSKERKDKVGERISALQQIVSPYGKTDTASVLLDAMHYIEFLHEQVKVLSAPYLQTVPDATQEELE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_019 MEFSRDAGMMMENKRNVCSLGESSIKRHKSDLSFSSKERKDKVGERISALQQIVSPYGKTDTASVLLDAMHYIEFLHEQVKVLSAPYLQTVPDATQEELE
10 20 30 40 50 60 70 80 90 100
110 120 130 140
AT1G05 QYSLRNRGLCLVPMENTVGVAQSNGADIWAPVKTPLSPAFSVTSQSPFR
::::::::::::::::::::::::::::::::::::::::::::::::.
RE_019 QYSLRNRGLCLVPMENTVGVAQSNGADIWAPVKTPLSPAFSVTSQSPFK
110 120 130 140
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