| Code name | RE_01B02 | |||
|---|---|---|---|---|
| Locus | AT2G35700 | |||
| Forward primer | ||||
| Reverse primer | ||||
| Alignment with TAIR7CDS | アミノ酸配列100%一致 | |||
| comment | ||||
| sequence |
>RE_01B02_582bp ATGGAACGTGACGACTGCCGGAGATTTCAGGACTCGCCGGCGCAGACGACGGAGAGAAGAGTGAAATATAAACCAAAGAAGAAGAGAGCCAAAGATGATG ATGATGAGAAAGTTGTTTCGAAGCATCCAAATTTTCGAGGTGTCAGAATGAGACAATGGGGAAAATGGGTGTCCGAAATCAGAGAGCCAAAAAAGAAATC AAGAATCTGGCTCGGTACTTTCTCCACGGCGGAGATGGCGGCGCGTGCTCACGACGTGGCAGCTTTAGCCATCAAAGGCGGTTCTGCACATCTCAACTTC CCGGAGCTCGCTTATCACCTCCCTAGACCAGCTAGTGCCGACCCTAAAGACATCCAAGCTGCCGCCGCCGCAGCTGCAGCCGCTGTGGCCATTGACATGG ATGTAGAGACGTCTTCGCCGTCGCCATCTCCCACAGTTACGGAAACGTCATCTCCGGCTATGATAGCACTCTCCGACGACGCGTTCTCCGATCTTCCTGA TCTCTTGCTCAACGTGAACCATAACATCGATGGCTTCTGGGACTCTTTTCCCTATGAAGAACCCTTCCTCTCTCAAAGTTAC >RE_01B02_translated MERDDCRRFQDSPAQTTERRVKYKPKKKRAKDDDDEKVVSKHPNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNF PELAYHLPRPASADPKDIQAAAAAAAAAVAIDMDVETSSPSPSPTVTETSSPAMIALSDDAFSDLPDLLLNVNHNIDGFWDSFPYEEPFLSQSY |
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| Alignment |
◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 581/582 (99.8%)（アミノ酸配列で100%）一致しました。
10 20 30 40 50 60 70 80 90 100
AT2G35 ATGGAACGTGACGACTGCCGGAGATTTCAGGACTCGCCGGCGCAGACGACGGAGAGAAGAGTGAAATATAAACCAAAGAAGAAAAGAGCCAAAGATGATG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::
RE_01B ATGGAACGTGACGACTGCCGGAGATTTCAGGACTCGCCGGCGCAGACGACGGAGAGAAGAGTGAAATATAAACCAAAGAAGAAGAGAGCCAAAGATGATG
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT2G35 ATGATGAGAAAGTTGTTTCGAAGCATCCAAATTTTCGAGGTGTCAGAATGAGACAATGGGGAAAATGGGTGTCCGAAATCAGAGAGCCAAAAAAGAAATC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_01B ATGATGAGAAAGTTGTTTCGAAGCATCCAAATTTTCGAGGTGTCAGAATGAGACAATGGGGAAAATGGGTGTCCGAAATCAGAGAGCCAAAAAAGAAATC
110 120 130 140 150 160 170 180 190 200
210 220 230 240 250 260 270 280 290 300
AT2G35 AAGAATCTGGCTCGGTACTTTCTCCACGGCGGAGATGGCGGCGCGTGCTCACGACGTGGCAGCTTTAGCCATCAAAGGCGGTTCTGCACATCTCAACTTC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_01B AAGAATCTGGCTCGGTACTTTCTCCACGGCGGAGATGGCGGCGCGTGCTCACGACGTGGCAGCTTTAGCCATCAAAGGCGGTTCTGCACATCTCAACTTC
210 220 230 240 250 260 270 280 290 300
310 320 330 340 350 360 370 380 390 400
AT2G35 CCGGAGCTCGCTTATCACCTCCCTAGACCAGCTAGTGCCGACCCTAAAGACATCCAAGCTGCCGCCGCCGCAGCTGCAGCCGCTGTGGCCATTGACATGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_01B CCGGAGCTCGCTTATCACCTCCCTAGACCAGCTAGTGCCGACCCTAAAGACATCCAAGCTGCCGCCGCCGCAGCTGCAGCCGCTGTGGCCATTGACATGG
310 320 330 340 350 360 370 380 390 400
410 420 430 440 450 460 470 480 490 500
AT2G35 ATGTAGAGACGTCTTCGCCGTCGCCATCTCCCACAGTTACGGAAACGTCATCTCCGGCTATGATAGCACTCTCCGACGACGCGTTCTCCGATCTTCCTGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_01B ATGTAGAGACGTCTTCGCCGTCGCCATCTCCCACAGTTACGGAAACGTCATCTCCGGCTATGATAGCACTCTCCGACGACGCGTTCTCCGATCTTCCTGA
410 420 430 440 450 460 470 480 490 500
510 520 530 540 550 560 570 580
AT2G35 TCTCTTGCTCAACGTGAACCATAACATCGATGGCTTCTGGGACTCTTTTCCCTATGAAGAACCCTTCCTCTCTCAAAGTTAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_01B TCTCTTGCTCAACGTGAACCATAACATCGATGGCTTCTGGGACTCTTTTCCCTATGAAGAACCCTTCCTCTCTCAAAGTTAC
510 520 530 540 550 560 570 580
10 20 30 40 50 60 70 80 90 100
AT2G35 MERDDCRRFQDSPAQTTERRVKYKPKKKRAKDDDDEKVVSKHPNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_01B MERDDCRRFQDSPAQTTERRVKYKPKKKRAKDDDDEKVVSKHPNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNF
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190
AT2G35 PELAYHLPRPASADPKDIQAAAAAAAAAVAIDMDVETSSPSPSPTVTETSSPAMIALSDDAFSDLPDLLLNVNHNIDGFWDSFPYEEPFLSQSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_01B PELAYHLPRPASADPKDIQAAAAAAAAAVAIDMDVETSSPSPSPTVTETSSPAMIALSDDAFSDLPDLLLNVNHNIDGFWDSFPYEEPFLSQSY
110 120 130 140 150 160 170 180 190
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