◆◆◆RE_01B04 detail◆◆◆

Code name	RE_01B04
Locus	AT2G44940
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment
sequence	>RE_01B04_885bp ATGGCAAGACAAATCAACATAGAGAGTAGTGTTTCTCAAGTTACCTTTATCTCCTCCGCCATCCCCGCCGTATCTTCCTCCTCCTCCATCACCGCTTCCG CCTCATTGTCCTCTTCACCTACTACATCTTCCTCTTCTTCGTCATCAACAAATTCTAACTTCATTGAGGAAGACAACTCTAAAAGAAAAGCATCTCGAAG ATCATTGTCATCGTTAGTCTCCGTTGAAGACGATGATGATCAAAACGGTGGAGGTGGGAAACGGCGAAAGACCAACGGTGGAGATAAACATCCGACGTAT AGAGGAGTGAGGATGAGGAGTTGGGGAAAATGGGTGTCGGAGATTAGAGAGCCGAGAAAGAAATCAAGAATCTGGCTCGGGACTTATCCAACGGCTGAGA TGGCAGCTCGAGCTCATGACGTAGCGGCTTTGGCCATTAAAGGTACAACGGCTTACCTCAATTTTCCCAAGTTAGCCGGCGAGCTTCCTCGTCCAGTCAC AAATTCTCCTAAAGACATTCAAGCCGCCGCCTCTTTAGCGGCCGTTAACTGGCAAGATTCGGTCAACGATGTGAGTAATTCTGAAGTGGCTGAAATAGTT GAAGCCGAGCCGAGTCGAGCCGTGGTGGCTCAGTTGTTTTCTTCGGACACAAGCACGACGACGACGACTCAGAGTCAAGAGTATTCGGAAGCTTCGTGTG CTTCGACTTCGGCGTGTACGGACAAAGACAGTGAGGAAGAGAAGCTGTTTGATTTGCCGGATTTGTTTACCGATGAGAATGAGATGATGATACGAAACGA TGCGTTTTGCTACTACTCGTCCACGTGGCAGCTTTGTGGAGCCGATGCTGGGTTTCGGCTTGAAGAGCCGTTTTTTCTATCTGAA >RE_01B04_translated MARQINIESSVSQVTFISSAIPAVSSSSSITASASLSSSPTTSSSSSSSTNSNFIEEDNSKRKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGDKHPTY RGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAGELPRPVTNSPKDIQAAASLAAVNWQDSVNDVSNSEVAEIV EAEPSRAVVAQLFSSDTSTTTTTQSQEYSEASCASTSACTDKDSEEEKLFDLPDLFTDENEMMIRNDAFCYYSSTWQLCGADAGFRLEEPFFLSE
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 884/885 (99.9%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT2G44 ATGGCAAGACAAATCAACATAGAGAGTAGTGTTTCTCAAGTTACCTTTATCTCCTCCGCCATCCCCGCCGTATCTTCCTCCTCCTCCATCACCGCTTCCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01B ATGGCAAGACAAATCAACATAGAGAGTAGTGTTTCTCAAGTTACCTTTATCTCCTCCGCCATCCCCGCCGTATCTTCCTCCTCCTCCATCACCGCTTCCG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G44 CCTCATTGTCCTCTTCACCTACTACATCTTCCTCTTCTTCGTCATCAACAAATTCTAACTTCATTGAGGAAGACAACTCTAAAAGAAAAGCATCTCGAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01B CCTCATTGTCCTCTTCACCTACTACATCTTCCTCTTCTTCGTCATCAACAAATTCTAACTTCATTGAGGAAGACAACTCTAAAAGAAAAGCATCTCGAAG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G44 ATCATTGTCATCGTTAGTCTCCGTTGAAGACGATGATGATCAAAACGGTGGAGGTGGGAAACGGCGAAAGACCAACGGTGGAGATAAACATCCGACGTAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01B ATCATTGTCATCGTTAGTCTCCGTTGAAGACGATGATGATCAAAACGGTGGAGGTGGGAAACGGCGAAAGACCAACGGTGGAGATAAACATCCGACGTAT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT2G44 AGAGGAGTGAGGATGAGGAGTTGGGGAAAATGGGTGTCGGAGATTAGAGAGCCGAGAAAGAAATCAAGAATCTGGCTCGGGACTTATCCAACGGCTGAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01B AGAGGAGTGAGGATGAGGAGTTGGGGAAAATGGGTGTCGGAGATTAGAGAGCCGAGAAAGAAATCAAGAATCTGGCTCGGGACTTATCCAACGGCTGAGA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT2G44 TGGCAGCTCGAGCTCATGACGTAGCGGCTTTAGCCATTAAAGGTACAACGGCTTACCTCAATTTTCCCAAGTTAGCCGGCGAGCTTCCTCGTCCAGTCAC ::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01B TGGCAGCTCGAGCTCATGACGTAGCGGCTTTGGCCATTAAAGGTACAACGGCTTACCTCAATTTTCCCAAGTTAGCCGGCGAGCTTCCTCGTCCAGTCAC 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT2G44 AAATTCTCCTAAAGACATTCAAGCCGCCGCCTCTTTAGCGGCCGTTAACTGGCAAGATTCGGTCAACGATGTGAGTAATTCTGAAGTGGCTGAAATAGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01B AAATTCTCCTAAAGACATTCAAGCCGCCGCCTCTTTAGCGGCCGTTAACTGGCAAGATTCGGTCAACGATGTGAGTAATTCTGAAGTGGCTGAAATAGTT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT2G44 GAAGCCGAGCCGAGTCGAGCCGTGGTGGCTCAGTTGTTTTCTTCGGACACAAGCACGACGACGACGACTCAGAGTCAAGAGTATTCGGAAGCTTCGTGTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01B GAAGCCGAGCCGAGTCGAGCCGTGGTGGCTCAGTTGTTTTCTTCGGACACAAGCACGACGACGACGACTCAGAGTCAAGAGTATTCGGAAGCTTCGTGTG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT2G44 CTTCGACTTCGGCGTGTACGGACAAAGACAGTGAGGAAGAGAAGCTGTTTGATTTGCCGGATTTGTTTACCGATGAGAATGAGATGATGATACGAAACGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01B CTTCGACTTCGGCGTGTACGGACAAAGACAGTGAGGAAGAGAAGCTGTTTGATTTGCCGGATTTGTTTACCGATGAGAATGAGATGATGATACGAAACGA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 AT2G44 TGCGTTTTGCTACTACTCGTCCACGTGGCAGCTTTGTGGAGCCGATGCTGGGTTTCGGCTTGAAGAGCCGTTTTTTCTATCTGAA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01B TGCGTTTTGCTACTACTCGTCCACGTGGCAGCTTTGTGGAGCCGATGCTGGGTTTCGGCTTGAAGAGCCGTTTTTTCTATCTGAA 810 820 830 840 850 860 870 880 10 20 30 40 50 60 70 80 90 100 AT2G44 MARQINIESSVSQVTFISSAIPAVSSSSSITASASLSSSPTTSSSSSSSTNSNFIEEDNSKRKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGDKHPTY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01B MARQINIESSVSQVTFISSAIPAVSSSSSITASASLSSSPTTSSSSSSSTNSNFIEEDNSKRKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGDKHPTY 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G44 RGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAGELPRPVTNSPKDIQAAASLAAVNWQDSVNDVSNSEVAEIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01B RGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAGELPRPVTNSPKDIQAAASLAAVNWQDSVNDVSNSEVAEIV 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 AT2G44 EAEPSRAVVAQLFSSDTSTTTTTQSQEYSEASCASTSACTDKDSEEEKLFDLPDLFTDENEMMIRNDAFCYYSSTWQLCGADAGFRLEEPFFLSE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01B EAEPSRAVVAQLFSSDTSTTTTTQSQEYSEASCASTSACTDKDSEEEKLFDLPDLFTDENEMMIRNDAFCYYSSTWQLCGADAGFRLEEPFFLSE 210 220 230 240 250 260 270 280 290

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