◆◆◆RE_01C01 detail◆◆◆

Code name	RE_01C01
Locus	AT4G23750
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment
sequence	>RE_01C01_1029bp ATGGAAGCGGAGAAGAAAATGGTTCTACCGAGAATCAAATTCACAGAGCACAAAACCAACACGACAACAATCGTATCGGAGTTAACCAACACTCACCAAA CCAGGATTCTTCGTATCTCAGTCACTGACCCAGACGCTACTGATTCCTCCAGTGACGACGAAGAAGAAGAACATCAACGCTTTGTCTCTAAACGCCGTCG TGTTAAGAAGTTTGTCAACGAAGTCTATCTCGATTCCGGTGCTGTTGTTACTGGTAGTTGTGGTCAAATGGAGTCGAAGAAGAGACAAAAGAGAGCGGTT AAATCGGAGTCTACTGTTTCTCCGGTTGTTTCAGCGACGACGACTACGACGGGAGAGAAGAAGTTCCGAGGAGTGAGACAGCGTCCATGGGGAAAATGGG CGGCGGAGATAAGAGATCCGTTGAAACGTGTACGGCTCTGGTTAGGTACTTACAACACGGCGGAAGAAGCTGCTATGGTTTACGATAACGCCGCTATTCA GCTTCGTGGTCCCGACGCTCTGACTAATTTCTCAGTCACTCCGACAACAGCGACGGAGAAGAAAGCCCCACCACCGTCTCCGGTGAAGAAGAAGAAGAAG AAAAACAACAAAAGCAAAAAATCCGTTACTGCATCTTCCTCCATCAGCAGAAGCAGCAGCAACGATTGTCTCTGCTCTCCGGTGTCTGTTCTCCGATCTC CTTTCGCCGTCGACGAATTCTCCGGCATTTCTTCATCACCAGTCGCGGCCGTTGTAGTCAAGGAAGAGCCATCCATGACAACGGTATCTGAAACTTTCTC TGATTTCTCGGCGCCCTTGTTCTCAGATGATGACGTGTTCGATTTCCGGAGCTCAGTGGTTCCCGACTATCTCGGCGGCGATTTATTTGGGGAAGATCTA TTCACGGCGGATATGTGTACGGATATGAACTTCGGATTCGATTTCGGATCCGGATTATCCAGCTGGCACATGGAGGACCATTTTCAAGATATCGGGGATC TATTCGGGTCGGATCCTCTTTTAGCTGTT >RE_01C01_translated MEAEKKMVLPRIKFTEHKTNTTTIVSELTNTHQTRILRISVTDPDATDSSSDDEEEEHQRFVSKRRRVKKFVNEVYLDSGAVVTGSCGQMESKKRQKRAV KSESTVSPVVSATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVTPTTATEKKAPPPSPVKKKKK KNNKSKKSVTASSSISRSSSNDCLCSPVSVLRSPFAVDEFSGISSSPVAAVVVKEEPSMTTVSETFSDFSAPLFSDDDVFDFRSSVVPDYLGGDLFGEDL FTADMCTDMNFGFDFGSGLSSWHMEDHFQDIGDLFGSDPLLAV
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1028/1029 (99.9%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT4G23 ATGGAAGCGGAGAAGAAAATGGTTCTACCGAGAATCAAATTCACAGAGCACAAAACCAACACGACAACAATCGTATCGGAGTTAACCAACACTCACCAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01C ATGGAAGCGGAGAAGAAAATGGTTCTACCGAGAATCAAATTCACAGAGCACAAAACCAACACGACAACAATCGTATCGGAGTTAACCAACACTCACCAAA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT4G23 CCAGGATTCTTCGTATCTCAGTCACTGACCCAGACGCTACTGATTCCTCCAGTGACGACGAAGAAGAAGAACATCAACGCTTTGTCTCTAAACGCCGTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01C CCAGGATTCTTCGTATCTCAGTCACTGACCCAGACGCTACTGATTCCTCCAGTGACGACGAAGAAGAAGAACATCAACGCTTTGTCTCTAAACGCCGTCG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT4G23 TGTTAAGAAGTTTGTCAACGAAGTCTATCTCGATTCCGGTGCTGTTGTTACTGGTAGTTGTGGTCAAATGGAGTCGAAGAAGAGACAAAAGAGAGCGGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01C TGTTAAGAAGTTTGTCAACGAAGTCTATCTCGATTCCGGTGCTGTTGTTACTGGTAGTTGTGGTCAAATGGAGTCGAAGAAGAGACAAAAGAGAGCGGTT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT4G23 AAATCGGAGTCTACTGTTTCTCCGGTTGTTTCAGCGACGACGACTACGACGGGAGAGAAGAAGTTCCGAGGAGTGAGACAGCGTCCATGGGGAAAATGGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01C AAATCGGAGTCTACTGTTTCTCCGGTTGTTTCAGCGACGACGACTACGACGGGAGAGAAGAAGTTCCGAGGAGTGAGACAGCGTCCATGGGGAAAATGGG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT4G23 CGGCGGAGATAAGAGATCCGTTGAAACGTGTACGGCTCTGGTTAGGTACTTACAACACGGCGGAAGAAGCTGCTATGGTTTACGATAACGCCGCTATTCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01C CGGCGGAGATAAGAGATCCGTTGAAACGTGTACGGCTCTGGTTAGGTACTTACAACACGGCGGAAGAAGCTGCTATGGTTTACGATAACGCCGCTATTCA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT4G23 GCTTCGTGGTCCCGACGCTCTGACTAATTTCTCAGTCACTCCGACAACAGCGACGGAGAAGAAAGCCCCACCACCGTCTCCGGTGAAGAAGAAGAAGAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01C GCTTCGTGGTCCCGACGCTCTGACTAATTTCTCAGTCACTCCGACAACAGCGACGGAGAAGAAAGCCCCACCACCGTCTCCGGTGAAGAAGAAGAAGAAG 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT4G23 AAAAACAACAAAAGCAAAAAATCCGTTACTGCTTCTTCCTCCATCAGCAGAAGCAGCAGCAACGATTGTCTCTGCTCTCCGGTGTCTGTTCTCCGATCTC :::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01C AAAAACAACAAAAGCAAAAAATCCGTTACTGCATCTTCCTCCATCAGCAGAAGCAGCAGCAACGATTGTCTCTGCTCTCCGGTGTCTGTTCTCCGATCTC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT4G23 CTTTCGCCGTCGACGAATTCTCCGGCATTTCTTCATCACCAGTCGCGGCCGTTGTAGTCAAGGAAGAGCCATCCATGACAACGGTATCTGAAACTTTCTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01C CTTTCGCCGTCGACGAATTCTCCGGCATTTCTTCATCACCAGTCGCGGCCGTTGTAGTCAAGGAAGAGCCATCCATGACAACGGTATCTGAAACTTTCTC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT4G23 TGATTTCTCGGCGCCCTTGTTCTCAGATGATGACGTGTTCGATTTCCGGAGCTCAGTGGTTCCCGACTATCTCGGCGGCGATTTATTTGGGGAAGATCTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01C TGATTTCTCGGCGCCCTTGTTCTCAGATGATGACGTGTTCGATTTCCGGAGCTCAGTGGTTCCCGACTATCTCGGCGGCGATTTATTTGGGGAAGATCTA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT4G23 TTCACGGCGGATATGTGTACGGATATGAACTTCGGATTCGATTTCGGATCCGGATTATCCAGCTGGCACATGGAGGACCATTTTCAAGATATCGGGGATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01C TTCACGGCGGATATGTGTACGGATATGAACTTCGGATTCGATTTCGGATCCGGATTATCCAGCTGGCACATGGAGGACCATTTTCAAGATATCGGGGATC 910 920 930 940 950 960 970 980 990 1000 1010 1020 AT4G23 TATTCGGGTCGGATCCTCTTTTAGCTGTT ::::::::::::::::::::::::::::: RE_01C TATTCGGGTCGGATCCTCTTTTAGCTGTT 1010 1020 10 20 30 40 50 60 70 80 90 100 AT4G23 MEAEKKMVLPRIKFTEHKTNTTTIVSELTNTHQTRILRISVTDPDATDSSSDDEEEEHQRFVSKRRRVKKFVNEVYLDSGAVVTGSCGQMESKKRQKRAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01C MEAEKKMVLPRIKFTEHKTNTTTIVSELTNTHQTRILRISVTDPDATDSSSDDEEEEHQRFVSKRRRVKKFVNEVYLDSGAVVTGSCGQMESKKRQKRAV 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT4G23 KSESTVSPVVSATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVTPTTATEKKAPPPSPVKKKKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01C KSESTVSPVVSATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVTPTTATEKKAPPPSPVKKKKK 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT4G23 KNNKSKKSVTASSSISRSSSNDCLCSPVSVLRSPFAVDEFSGISSSPVAAVVVKEEPSMTTVSETFSDFSAPLFSDDDVFDFRSSVVPDYLGGDLFGEDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_01C KNNKSKKSVTASSSISRSSSNDCLCSPVSVLRSPFAVDEFSGISSSPVAAVVVKEEPSMTTVSETFSDFSAPLFSDDDVFDFRSSVVPDYLGGDLFGEDL 210 220 230 240 250 260 270 280 290 300 310 320 330 340 AT4G23 FTADMCTDMNFGFDFGSGLSSWHMEDHFQDIGDLFGSDPLLAV ::::::::::::::::::::::::::::::::::::::::::: RE_01C FTADMCTDMNFGFDFGSGLSSWHMEDHFQDIGDLFGSDPLLAV 310 320 330 340

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