| Code name | RE_01C11 | |||
|---|---|---|---|---|
| Locus | AT2G33310 | |||
| Forward primer | ||||
| Reverse primer | ||||
| Alignment with TAIR7CDS | アミノ酸配列100%一致 | |||
| comment | ||||
| sequence |
>RE_01C11_741bp ATGATTACTGAACTTGAGATGGGGAAAGGTGAGAGTGAGCTTGAGCTTGGTCTAGGGCTGAGTCTTGGCGGTGGAACGGCGGCCAAGATTGGTAAATCAG GTGGTGGTGGCGCGTGGGGAGAGCGTGGAAGGCTTTTGACGGCTAAGGATTTTCCTTCTGTTGGTTCTAAACGTGCTGCTGATTCTGCTTCTCATGCTGG TTCATCTCCTCCTCGTTCAAGCAGTCAAGTTGTTGGATGGCCTCCTATAGGGTCACACAGGATGAACAGTTTGGTTAATAACCAAGCTACAAAGTCAGCA AGAGAAGAAGAAGAAGCTGGTAAGAAGAAAGTGAAAGATGATGAACCTAAAGATGTGACAAAGAAAGTGAATGGGAAAGTACAAGTTGGATTTATTAAGG TGAACATGGATGGAGTTGCTATAGGAAGAAAAGTGGATTTGAATGCTCATTCTTCTTACGAGAATTTGGCGCAAACATTGGAAGATATGTTCTTTCGCAC TAATCCGGGTACTGTCGGGTTAACCAGTCAGTTCACTAAACCGTTGAGGCTTTTAGATGGATCGTCTGAGTTTGTACTTACTTATGAAGATAAGGAAGGA GATTGGATGCTTGTTGGTGATGTTCCATGGAGAATGTTCATCAACTCGGTGAAAAGGCTACGTGTGATGAAAACCTCTGAAGCTAATGGACTCGCTGCAC GAAATCAAGAACCAAACGAGAGACAGCGAAAGCAGCCGGTT >RE_01C11_translated MITELEMGKGESELELGLGLSLGGGTAAKIGKSGGGGAWGERGRLLTAKDFPSVGSKRAADSASHAGSSPPRSSSQVVGWPPIGSHRMNSLVNNQATKSA REEEEAGKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFVLTYEDKEG DWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEPNERQRKQPV |
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| Alignment |
◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 738/741 (99.6%)（アミノ酸配列で246/247 (99.6%)）一致しました。
10 20 30 40 50 60 70 80 90 100
AT2G33 ATGATTACTGAACTTGAGATGGGGAAAGGTGAGAGTGAGCTTGAGCTTGGTCTAGGGCTGAGTCTTGGCGGTGGAACGGCGGCCAAGATTGGTAAATCAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_01C ATGATTACTGAACTTGAGATGGGGAAAGGTGAGAGTGAGCTTGAGCTTGGTCTAGGGCTGAGTCTTGGCGGTGGAACGGCGGCCAAGATTGGTAAATCAG
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT2G33 GTGGTGGTGGCGCGTGGGGAGAGCGTGGAAGGCTTTTGACGGCTAAGGATTTTCCTTCTGTTGGTTCTAAACGTGCTGCTGATTCTGCTTCTCATGCTGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_01C GTGGTGGTGGCGCGTGGGGAGAGCGTGGAAGGCTTTTGACGGCTAAGGATTTTCCTTCTGTTGGTTCTAAACGTGCTGCTGATTCTGCTTCTCATGCTGG
110 120 130 140 150 160 170 180 190 200
210 220 230 240 250 260 270 280 290
AT2G33 TTCATCTCCTCCTCGTTCA---AGTCAAGTTGTTGGATGGCCTCCTATAGGGTCACACAGGATGAACAGTTTGGTTAATAACCAAGCTACAAAGTCAGCA
::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_01C TTCATCTCCTCCTCGTTCAAGCAGTCAAGTTGTTGGATGGCCTCCTATAGGGTCACACAGGATGAACAGTTTGGTTAATAACCAAGCTACAAAGTCAGCA
210 220 230 240 250 260 270 280 290 300
300 310 320 330 340 350 360 370 380 390
AT2G33 AGAGAAGAAGAAGAAGCTGGTAAGAAGAAAGTGAAAGATGATGAACCTAAAGATGTGACAAAGAAAGTGAATGGGAAAGTACAAGTTGGATTTATTAAGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_01C AGAGAAGAAGAAGAAGCTGGTAAGAAGAAAGTGAAAGATGATGAACCTAAAGATGTGACAAAGAAAGTGAATGGGAAAGTACAAGTTGGATTTATTAAGG
310 320 330 340 350 360 370 380 390 400
400 410 420 430 440 450 460 470 480 490
AT2G33 TGAACATGGATGGAGTTGCTATAGGAAGAAAAGTGGATTTGAATGCTCATTCTTCTTACGAGAATTTGGCGCAAACATTGGAAGATATGTTCTTTCGCAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_01C TGAACATGGATGGAGTTGCTATAGGAAGAAAAGTGGATTTGAATGCTCATTCTTCTTACGAGAATTTGGCGCAAACATTGGAAGATATGTTCTTTCGCAC
410 420 430 440 450 460 470 480 490 500
500 510 520 530 540 550 560 570 580 590
AT2G33 TAATCCGGGTACTGTCGGGTTAACCAGTCAGTTCACTAAACCGTTGAGGCTTTTAGATGGATCGTCTGAGTTTGTACTTACTTATGAAGATAAGGAAGGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_01C TAATCCGGGTACTGTCGGGTTAACCAGTCAGTTCACTAAACCGTTGAGGCTTTTAGATGGATCGTCTGAGTTTGTACTTACTTATGAAGATAAGGAAGGA
510 520 530 540 550 560 570 580 590 600
600 610 620 630 640 650 660 670 680 690
AT2G33 GATTGGATGCTTGTTGGTGATGTTCCATGGAGAATGTTCATCAACTCGGTGAAAAGGCTACGTGTGATGAAAACCTCTGAAGCTAATGGACTCGCTGCAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_01C GATTGGATGCTTGTTGGTGATGTTCCATGGAGAATGTTCATCAACTCGGTGAAAAGGCTACGTGTGATGAAAACCTCTGAAGCTAATGGACTCGCTGCAC
610 620 630 640 650 660 670 680 690 700
700 710 720 730
AT2G33 GAAATCAAGAACCAAACGAGAGACAGCGAAAGCAGCCGGTT
:::::::::::::::::::::::::::::::::::::::::
RE_01C GAAATCAAGAACCAAACGAGAGACAGCGAAAGCAGCCGGTT
710 720 730 740
10 20 30 40 50 60 70 80 90
AT2G33 MITELEMGKGESELELGLGLSLGGGTAAKIGKSGGGGAWGERGRLLTAKDFPSVGSKRAADSASHAGSSPPR-SSQVVGWPPIGSHRMNSLVNNQATKSA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::
RE_01C MITELEMGKGESELELGLGLSLGGGTAAKIGKSGGGGAWGERGRLLTAKDFPSVGSKRAADSASHAGSSPPRSSSQVVGWPPIGSHRMNSLVNNQATKSA
10 20 30 40 50 60 70 80 90 100
100 110 120 130 140 150 160 170 180 190
AT2G33 REEEEAGKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFVLTYEDKEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_01C REEEEAGKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFVLTYEDKEG
110 120 130 140 150 160 170 180 190 200
200 210 220 230 240
AT2G33 DWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEPNERQRKQPV
:::::::::::::::::::::::::::::::::::::::::::::::
RE_01C DWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEPNERQRKQPV
210 220 230 240
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