◆◆◆RE_0205 detail◆◆◆

Code name	RE_0205
Locus	AT1G26260
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment	0311_アミノ酸配列70%以上一致
sequence	>RE_0205_1170bp ATGAGTGACAAAGACGAGTTTGCCGCAAAGAAGAAGGATTTGGTCAATACGCCAGTGGATTTGTATCCTCCGGAGAATCCAATGTTGGGTCCTTCTCCGA TGATGGATTCATTCAGAGAAACTCTTTGGCATGATGGTGGTTTCAATGTCCACACAGATGCAGACACTTCCTTTAGAGGTAATAATAATATTGATATACC TCTTGAAATGGGTTGGAATATGGCTCAGTTCCCTGCAGATTCAGGATTCATTGAGCGTGCTGCAAAGTTTTCTTTTTTTGGATGTGGTGAAATGATGATG AACCAACAACAATCATCTCTTGGAGTTCCAGATTCAACTGGCTTGTTTCTTCAAGATACACAGATTCCTAGTGGATCCAAACTAGATAATGGTCCTCTTA CTGATGCATCTAAGTTAGTGAAAGAGAGATCGATTAATAATGTATCAGAGGATTCTCAATCTAGTGGAGGTAATGGTCATGATGATGCTAAGTGTGGGCA AACATCTTCCAAGGGGTTTAGTAGTAAGAAGAGGAAAAGAATTGGGAAGGATTGTGAAGAAGAAGAAGATAAAAAGCAAAAGGATGAGCAAAGTCCAACT TCAAATGCGAACAAGACAAACAGTGAGAAGCAACCTTCTGATTCTTTAAAGGATGGGTATATTCACATGAGGGCACGAAGAGGCCAGGCTACTAATAGTC ACAGTCTTGCTGAAAGAGTAAGAAGAGAAAAAATCAGTGAAAGGATGAAGTTCTTGCAAGATCTTGTGCCAGGTTGCGACAAGGTGACTGGTAAGGCAGT TATGCTCGATGAAATCATTAACTATGTGCAATCACTTCAATGCCAAATCGAGTTTTTATCGATGAAACTTTCGGCTGTGAATCCTGTGCTCGATTTTAAC CTCGAAAGCCTCCTTGCAAAAGATGCTCTTCAATCATCTGCACCGACATTTCCCCACAACATGTCGATGCTTTATCCTCCTGTATCGTATCTCTCTCAAA CAGGATTCATGCAACCGAACATTTCCTCAATGTCGCTATTGAGTGGAGGATTAAAACGGCAGGAAACACATGGATATGAAAGTGATCACCACAATCTTGT CCACATGAAACATGAAACCGGCACTGCGCCTGATCATGAAGATACAACAGCTGACATGAAGGTGGAGCCG >RE_0205_translated MSDKDEFAAKKKDLVNTPVDLYPPENPMLGPSPMMDSFRETLWHDGGFNVHTDADTSFRGNNNIDIPLEMGWNMAQFPADSGFIERAAKFSFFGCGEMMM NQQQSSLGVPDSTGLFLQDTQIPSGSKLDNGPLTDASKLVKERSINNVSEDSQSSGGNGHDDAKCGQTSSKGFSSKKRKRIGKDCEEEEDKKQKDEQSPT SNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFN LESLLAKDALQSSAPTFPHNMSMLYPPVSYLSQTGFMQPNISSMSLLSGGLKRQETHGYESDHHNLVHMKHETGTAPDHEDTTADMKVEP
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1168/1170 (99.8%)（アミノ酸配列で389/390 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G26 ATGAGTGACAAAGACGAGTTTGCCGCAAAGAAGAAGGATTTGGTCAATACGCCAGTGGATTTGTATCCTCCGGAGAATCCAATGTTGGGTCCTTCTCCGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_020 ATGAGTGACAAAGACGAGTTTGCCGCAAAGAAGAAGGATTTGGTCAATACGCCAGTGGATTTGTATCCTCCGGAGAATCCAATGTTGGGTCCTTCTCCGA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G26 TGATGGATTCATTCAGAGAAACTCTTTGGCATGATGGTGGTTTCAATGTCCACACAGATGCAGACACTTCCTTTAGAGGTAATAATAATATTGATATACC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_020 TGATGGATTCATTCAGAGAAACTCTTTGGCATGATGGTGGTTTCAATGTCCACACAGATGCAGACACTTCCTTTAGAGGTAATAATAATATTGATATACC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G26 TCTTGAAATGGGTTGGAATATGGCTCAGTTCCCTGCAGATTCAGGATTCATTGAGCGTGCTGCAAAGTTTTCTTTTTTTGGATGTGGTGAAATGATGATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_020 TCTTGAAATGGGTTGGAATATGGCTCAGTTCCCTGCAGATTCAGGATTCATTGAGCGTGCTGCAAAGTTTTCTTTTTTTGGATGTGGTGAAATGATGATG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G26 AACCAACAACAATCATCTCTTGGAGTTCCAGATTCAACTGGCTTGTTTCTTCAAGATACACAGATTCCTAGTGGATCCAAACTAGATAATGGTCCTCTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_020 AACCAACAACAATCATCTCTTGGAGTTCCAGATTCAACTGGCTTGTTTCTTCAAGATACACAGATTCCTAGTGGATCCAAACTAGATAATGGTCCTCTTA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G26 CTGATGCATCTAAGTTAGTGAAAGAGAGATCGATTAATAATGTATCAGAGGATTCTCAATCTAGTGGAGGTAATGGTCATGATGATGCTAAGTGTGGGCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_020 CTGATGCATCTAAGTTAGTGAAAGAGAGATCGATTAATAATGTATCAGAGGATTCTCAATCTAGTGGAGGTAATGGTCATGATGATGCTAAGTGTGGGCA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G26 AACATCTTCCAAGGGGTTTAGTAGTAAGAAGAGGAAAAGAATTGGGAAGGATTGTGAAGAAGAAGAAGATAAAAAGCAAAAGGATGAGCAAAGTCCAACT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_020 AACATCTTCCAAGGGGTTTAGTAGTAAGAAGAGGAAAAGAATTGGGAAGGATTGTGAAGAAGAAGAAGATAAAAAGCAAAAGGATGAGCAAAGTCCAACT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G26 TCAAATGCGAACAAGACAAACAGTGAGAAGCAACCTTCTGATTCTTTAAAGGATGGGTATATTCACATGAGGGCACGAAGAGGCCAGGCTACTAATAGTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_020 TCAAATGCGAACAAGACAAACAGTGAGAAGCAACCTTCTGATTCTTTAAAGGATGGGTATATTCACATGAGGGCACGAAGAGGCCAGGCTACTAATAGTC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G26 ACAGTCTTGCTGAAAGAGTAAGAAGAGAAAAAATCAGTGAAAGGATGAAGTTCTTGCAAGATCTTGTGCCAGGTTGCGACAAGGTGACTGGTAAGGCAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_020 ACAGTCTTGCTGAAAGAGTAAGAAGAGAAAAAATCAGTGAAAGGATGAAGTTCTTGCAAGATCTTGTGCCAGGTTGCGACAAGGTGACTGGTAAGGCAGT 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G26 TATGCTCGATGAAATCATTAACTATGTGCAATCACTTCAATGCCAAATCGAGTTTTTATCGATGAAACTTTCGGCTGTGAATCCTGTGCTCGATTTTAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_020 TATGCTCGATGAAATCATTAACTATGTGCAATCACTTCAATGCCAAATCGAGTTTTTATCGATGAAACTTTCGGCTGTGAATCCTGTGCTCGATTTTAAC 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT1G26 CTCGAAAGCCTCCTTGCAAAAGATGCTCTTCAATCATCTGCACCGACATTTCCCCACAACATGTCGATGCTTTATCCTCCTGTATCGTATCTCTCTCAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_020 CTCGAAAGCCTCCTTGCAAAAGATGCTCTTCAATCATCTGCACCGACATTTCCCCACAACATGTCGATGCTTTATCCTCCTGTATCGTATCTCTCTCAAA 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT1G26 CAGGATTCATGCAACCGAACATTTCCTCAATGTCGCTATTGAGTGGAGGATTAAAACGGCAGGAAACACATGGATATGAAAGTGATCACCACAATCTTGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_020 CAGGATTCATGCAACCGAACATTTCCTCAATGTCGCTATTGAGTGGAGGATTAAAACGGCAGGAAACACATGGATATGAAAGTGATCACCACAATCTTGT 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 AT1G26 CCACATGAACCATGAAACCGGCACTGCACCTGATCATGAAGATACAACAGCTGACATGAAGGTGGAGCCG ::::::::: ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: RE_020 CCACATGAAACATGAAACCGGCACTGCGCCTGATCATGAAGATACAACAGCTGACATGAAGGTGGAGCCG 1110 1120 1130 1140 1150 1160 1170 10 20 30 40 50 60 70 80 90 100 AT1G26 MSDKDEFAAKKKDLVNTPVDLYPPENPMLGPSPMMDSFRETLWHDGGFNVHTDADTSFRGNNNIDIPLEMGWNMAQFPADSGFIERAAKFSFFGCGEMMM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_020 MSDKDEFAAKKKDLVNTPVDLYPPENPMLGPSPMMDSFRETLWHDGGFNVHTDADTSFRGNNNIDIPLEMGWNMAQFPADSGFIERAAKFSFFGCGEMMM 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G26 NQQQSSLGVPDSTGLFLQDTQIPSGSKLDNGPLTDASKLVKERSINNVSEDSQSSGGNGHDDAKCGQTSSKGFSSKKRKRIGKDCEEEEDKKQKDEQSPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_020 NQQQSSLGVPDSTGLFLQDTQIPSGSKLDNGPLTDASKLVKERSINNVSEDSQSSGGNGHDDAKCGQTSSKGFSSKKRKRIGKDCEEEEDKKQKDEQSPT 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G26 SNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_020 SNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFN 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 AT1G26 LESLLAKDALQSSAPTFPHNMSMLYPPVSYLSQTGFMQPNISSMSLLSGGLKRQETHGYESDHHNLVHMNHETGTAPDHEDTTADMKVEP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: RE_020 LESLLAKDALQSSAPTFPHNMSMLYPPVSYLSQTGFMQPNISSMSLLSGGLKRQETHGYESDHHNLVHMKHETGTAPDHEDTTADMKVEP 310 320 330 340 350 360 370 380 390

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