◆◆◆RE_0213 detail◆◆◆

Code name	RE_0213
Locus	AT1G51140
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment	0422_アミノ酸配列70%以上一致
sequence	>RE_0213_1137bp ATGGAATCAGAATTCCAGCAACATCACTTCCTTCTCCACGATCATCAACACCAGAGACCAAGAAACTCAGGATTGATTCGTTACCAATCAGCACCAAGTT CGTACTTTTCGAGTTTCGGTGAATCAATCGAAGAGTTTTTAGATCGACCCACAAGTCCTGAAACTGAGCGAATCTTATCTGGCTTTTTACAAACCACCGA CACAAGCGACAACGTTGATAGTTTCCTTCACCATACTTTTAACAGTGATGGAACTGAGAAGAAACCTCCGGAAGTTAAAACAGAGGACGAAGATGCTGAA ATTCCGGTGACTGCGACGGCGACGGCGATGGAGGTTGTTGTTTCCGGTGATGGTGAAATCTCAGTGAATCCTGAAGTATCGATTGGGTATGTGGCTTCGG TTTCGAGGAATAAGAGACCAAGAGAGAAAGATGATCGGACTCCGGTGAATAATCTAGCTCGTCATAATAGTTCACCGGCCGGATTATTTTCATCCATTGA TGTTGAAACAGCTTATGCAGCTGTAATGAAAAGTATGGGAGGTTTTGGAGGAAGTAATGTGATGAGTACAAGCAATACTGAAGCTTCGTCTCTTACTCCT AGAAGCAAGTTACTTCCTCCTACTTCTAGAGCGATGAGTCCGATCTCTGAGGTTGATGTTAAACCCGGTTTCTCGTCTAGATTGCCTCCTCGGACGCTTT CCGGTGGGTTTAATCGTTCTTTTGGGAATGAAGGGTCTGCTTCTTCCAAGCTTACAGCTCTTGCTAGGACCCAATCTGGAGGTCTAGATCAATACAAAAC CAAGGATGAGGATTCAGCAAGTAGACGTCCTCCTTTGGCACATCACATGAGTTTGCCCAAGTCTTTATCAGATATTGAACAGTTACTGTCAGATTCTATC CCATGTAAGATCAGAGCCAAGCGGGGTTGTGCAACTCATCCTCGAAGCATAGCCGAGAGGGTGAGAAGAACCAAGATCAGTGAAAGAATGAGGAAGCTGC AAGACCTTGTTCCAAACATGGGCACGCAAACAAACACAGCAGACATGTTGGATCTTGCGGTTCAATACATCAAGGACCTGCAAGAACAAGTGAAGGCGCT CGAAGAGAGTCGGGCAAGATGTAGATGCTCTAGTGCG >RE_0213_translated MESEFQQHHFLLHDHQHQRPRNSGLIRYQSAPSSYFSSFGESIEEFLDRPTSPETERILSGFLQTTDTSDNVDSFLHHTFNSDGTEKKPPEVKTEDEDAE IPVTATATAMEVVVSGDGEISVNPEVSIGYVASVSRNKRPREKDDRTPVNNLARHNSSPAGLFSSIDVETAYAAVMKSMGGFGGSNVMSTSNTEASSLTP RSKLLPPTSRAMSPISEVDVKPGFSSRLPPRTLSGGFNRSFGNEGSASSKLTALARTQSGGLDQYKTKDEDSASRRPPLAHHMSLPKSLSDIEQLLSDSI PCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMGTQTNTADMLDLAVQYIKDLQEQVKALEESRARCRCSSA
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1136/1137 (99.9%)（アミノ酸配列で378/379 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G51 ATGGAATCAGAATTCCAGCAACATCACTTCCTTCTCCACGATCATCAACACCAGAGACCAAGAAACTCAGGATTGATTCGTTACCAATCAGCACCAAGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 ATGGAATCAGAATTCCAGCAACATCACTTCCTTCTCCACGATCATCAACACCAGAGACCAAGAAACTCAGGATTGATTCGTTACCAATCAGCACCAAGTT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G51 CGTACTTTTCGAGTTTCGGTGAATCAATCGAAGAGTTTTTAGATCGACCCACAAGTCCTGAAACTGAGCGAATCTTATCTGGCTTTTTACAAACCACCGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 CGTACTTTTCGAGTTTCGGTGAATCAATCGAAGAGTTTTTAGATCGACCCACAAGTCCTGAAACTGAGCGAATCTTATCTGGCTTTTTACAAACCACCGA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G51 CACAAGCGACAACGTTGATAGTTTCCTTCACCATACTTTTAACAGTGATGGAACTGAGAAGAAACCTCCGGAAGTTAAAACAGAGGACGAAGATGCTGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 CACAAGCGACAACGTTGATAGTTTCCTTCACCATACTTTTAACAGTGATGGAACTGAGAAGAAACCTCCGGAAGTTAAAACAGAGGACGAAGATGCTGAA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G51 ATTCCGGTGACTGCGACGGCGACGGCGATGGAGGTTGTTGTTTCCGGTGATGGTGAAATCTCAGTGAATCCTGAAGTATCGATTGGGTATGTGGCTTCGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 ATTCCGGTGACTGCGACGGCGACGGCGATGGAGGTTGTTGTTTCCGGTGATGGTGAAATCTCAGTGAATCCTGAAGTATCGATTGGGTATGTGGCTTCGG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G51 TTTCGAGGAATAAGAGACCAAGAGAGAAAGATGATCGGACTCCGGTGAATAATCTAGCTCGTCATAATAGTTCACCGGCCGGATTATTTTCATCCATTGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 TTTCGAGGAATAAGAGACCAAGAGAGAAAGATGATCGGACTCCGGTGAATAATCTAGCTCGTCATAATAGTTCACCGGCCGGATTATTTTCATCCATTGA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G51 TGTTGAAACAGCTTATGCAGCTGTAATGAAAAGTATGGGAGGTTTTGGAGGAAGTAATGTGATGAGTACAAGCAATACTGAAGCTTCGTCTCTTACTCCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 TGTTGAAACAGCTTATGCAGCTGTAATGAAAAGTATGGGAGGTTTTGGAGGAAGTAATGTGATGAGTACAAGCAATACTGAAGCTTCGTCTCTTACTCCT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G51 AGAAGCAAGTTACTTCCTCCTACTTCTAGAGCGATGAGTCCGATCTCTGAGGTTGATGTTAAACCCGGTTTCTCGTCTAGATTGCCTCCTCGGACGCTTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 AGAAGCAAGTTACTTCCTCCTACTTCTAGAGCGATGAGTCCGATCTCTGAGGTTGATGTTAAACCCGGTTTCTCGTCTAGATTGCCTCCTCGGACGCTTT 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G51 CCGGTGGGTTTAATCGTTCTTTTGGGAATGAAGGGTCTGCTTCTTCCAAGCTTACAGCTCTTGCTAGGACCCAATCTGGAGGTCTAGATCAATACAAAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 CCGGTGGGTTTAATCGTTCTTTTGGGAATGAAGGGTCTGCTTCTTCCAAGCTTACAGCTCTTGCTAGGACCCAATCTGGAGGTCTAGATCAATACAAAAC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G51 CAAGGATGAGGATTCAGCAAGTAGACGTCCTCCTTTGGCACATCACATGAGTTTGCCCAAGTCTTTATCAGATATTGAACAGTTACTGTCAGATTCTATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 CAAGGATGAGGATTCAGCAAGTAGACGTCCTCCTTTGGCACATCACATGAGTTTGCCCAAGTCTTTATCAGATATTGAACAGTTACTGTCAGATTCTATC 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT1G51 CCATGTAAGATCAGAGCCAAGCGGGGTTGTGCAACTCATCCTCGAAGCATAGCCGAGAGGGTGAGAAGAACCAAGATCAGTGAAAGAATGAGGAAGCTGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 CCATGTAAGATCAGAGCCAAGCGGGGTTGTGCAACTCATCCTCGAAGCATAGCCGAGAGGGTGAGAAGAACCAAGATCAGTGAAAGAATGAGGAAGCTGC 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT1G51 AAGACCTTGTTCCAAACATGGACACGCAAACAAACACAGCAGACATGTTGGATCTTGCGGTTCAATACATCAAGGACCTGCAAGAACAAGTGAAGGCGCT ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 AAGACCTTGTTCCAAACATGGGCACGCAAACAAACACAGCAGACATGTTGGATCTTGCGGTTCAATACATCAAGGACCTGCAAGAACAAGTGAAGGCGCT 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 AT1G51 CGAAGAGAGTCGGGCAAGATGTAGATGCTCTAGTGCG ::::::::::::::::::::::::::::::::::::: RE_021 CGAAGAGAGTCGGGCAAGATGTAGATGCTCTAGTGCG 1110 1120 1130 10 20 30 40 50 60 70 80 90 100 AT1G51 MESEFQQHHFLLHDHQHQRPRNSGLIRYQSAPSSYFSSFGESIEEFLDRPTSPETERILSGFLQTTDTSDNVDSFLHHTFNSDGTEKKPPEVKTEDEDAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 MESEFQQHHFLLHDHQHQRPRNSGLIRYQSAPSSYFSSFGESIEEFLDRPTSPETERILSGFLQTTDTSDNVDSFLHHTFNSDGTEKKPPEVKTEDEDAE 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G51 IPVTATATAMEVVVSGDGEISVNPEVSIGYVASVSRNKRPREKDDRTPVNNLARHNSSPAGLFSSIDVETAYAAVMKSMGGFGGSNVMSTSNTEASSLTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 IPVTATATAMEVVVSGDGEISVNPEVSIGYVASVSRNKRPREKDDRTPVNNLARHNSSPAGLFSSIDVETAYAAVMKSMGGFGGSNVMSTSNTEASSLTP 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G51 RSKLLPPTSRAMSPISEVDVKPGFSSRLPPRTLSGGFNRSFGNEGSASSKLTALARTQSGGLDQYKTKDEDSASRRPPLAHHMSLPKSLSDIEQLLSDSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 RSKLLPPTSRAMSPISEVDVKPGFSSRLPPRTLSGGFNRSFGNEGSASSKLTALARTQSGGLDQYKTKDEDSASRRPPLAHHMSLPKSLSDIEQLLSDSI 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 AT1G51 PCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRARCRCSSA :::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: RE_021 PCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMGTQTNTADMLDLAVQYIKDLQEQVKALEESRARCRCSSA 310 320 330 340 350 360 370

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