◆◆◆RE_0215 detail◆◆◆

Code name	RE_0215
Locus	AT1G61660
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment	0420_アミノ酸配列100%一致
sequence	>RE_0215_1179bp ATGGCGGAGGAGTTTAAAGCTACGGCATCGATTTGTGGTGGCGGAGGTGGCGCGTGGTGGAACTCGCCAAGGAGCGTTATGTCTCCTTCGGATCATTTCT TGTCACCATGCTTCGGAGCGGCTATCACTTCCAATGATTTTAGCTCGCAAGAGAATCATCTCAAATCTAGGATGACTTGTACGGACAACAACAACATCGT TTTCGGGCAGCGAGAGGCGGATTCTGACAGTGGAGGAAGTACCGTGACGATGGACTCGACGTTGCAGATGATGGGTCTAGGGTTTTCCTCAAATTGTTCT TCAGATTGGAACCAAACCATTTTACAAGAAGACTTAAACTCAAGCTTCATAAGGAGCTCACAAGATCAAGATCATGGCCAAGGATTCTTATCCACAACTA CTTCACCTTATATACTTAATCCAGCTTGTTCTTCATCTCCATCAACTTCTTCGTCCTCAAGCTTGATACGAACCTTTTACGATCCCGAACCAAGTCCATA CAACTTTGTCTCCACCACAAGTGGTTCAATCAACGATCCTCAACTTTCTTGGGCTAATAAGACAAATCCTCATCATCAAGTAGCTTATGGACTAATTAAC AGCTTCTCTAACAACGCAAACTCTCGACCCTTTTGGAATTCTTCATCAACCACTAACTTAAACAACACGACGCCGAGCAATTTTGTAACCACTCCGCAGA TAATATCTACTCGTTTGGAGGACAAAACCAAGAATCTGAAGACAAGAGCTCAGAGTGAGTCTTTGAAGAGAGCAAAGGATAATGAATCTGCGGCGAAGAA ACCGAGAGTCACCACGCCTTCACCGTTGCCAACTTTCAAGGTGAGAAAAGAGAATCTAAGGGACCAGATAACTTCATTACAACAACTAGTTTCACCTTTC GGAAAGACAGATACTGCATCTGTTCTCCAAGAAGCTATAGAGTACATCAAGTTCCTTCACGACCAAGTCACTGTTCTAAGCACTCCATACATGAAACAAG GTGCCTCGAACCAACAACAACAGCAGATATCTGGTAAATCGAAGAGTCAAGATGAGAATGAGAATCACGAACTAAGAGGACATGGTCTATGTCTCGTCCC AATATCAAGCACGTTTCCGGTGGCTAACGAAACAACAGCCGATTTTTGGACACCAACGTTTGGGGGCAACAATTTCAGG >RE_0215_translated MAEEFKATASICGGGGGAWWNSPRSVMSPSDHFLSPCFGAAITSNDFSSQENHLKSRMTCTDNNNIVFGQREADSDSGGSTVTMDSTLQMMGLGFSSNCS SDWNQTILQEDLNSSFIRSSQDQDHGQGFLSTTTSPYILNPACSSSPSTSSSSSLIRTFYDPEPSPYNFVSTTSGSINDPQLSWANKTNPHHQVAYGLIN SFSNNANSRPFWNSSSTTNLNNTTPSNFVTTPQIISTRLEDKTKNLKTRAQSESLKRAKDNESAAKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVSPF GKTDTASVLQEAIEYIKFLHDQVTVLSTPYMKQGASNQQQQQISGKSKSQDENENHELRGHGLCLVPISSTFPVANETTADFWTPTFGGNNFR
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1178/1179 (99.9%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G61 ATGGCGGAGGAGTTTAAAGCTACGGCATCGATTTGTGGTGGCGGAGGTGGCGCGTGGTGGAACTCGCCAAGGAGCGTTATGTCTCCTTCGGATCATTTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 ATGGCGGAGGAGTTTAAAGCTACGGCATCGATTTGTGGTGGCGGAGGTGGCGCGTGGTGGAACTCGCCAAGGAGCGTTATGTCTCCTTCGGATCATTTCT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G61 TGTCACCATGCTTCGGAGCGGCTATCACTTCCAATGATTTTAGCTCGCAAGAGAATCATCTCAAATCTAGGATGACTTGTACGGACAACAACAACATCGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 TGTCACCATGCTTCGGAGCGGCTATCACTTCCAATGATTTTAGCTCGCAAGAGAATCATCTCAAATCTAGGATGACTTGTACGGACAACAACAACATCGT 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G61 TTTCGGGCAGCGAGAGGCGGATTCTGACAGTGGAGGAAGTACCGTGACGATGGACTCGACGTTGCAGATGATGGGTCTAGGGTTTTCCTCAAATTGTTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 TTTCGGGCAGCGAGAGGCGGATTCTGACAGTGGAGGAAGTACCGTGACGATGGACTCGACGTTGCAGATGATGGGTCTAGGGTTTTCCTCAAATTGTTCT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G61 TCAGATTGGAACCAAACCATTTTACAAGAAGACTTAAACTCAAGCTTCATAAGGAGCTCACAAGATCAAGATCATGGCCAAGGATTCTTATCCACAACTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 TCAGATTGGAACCAAACCATTTTACAAGAAGACTTAAACTCAAGCTTCATAAGGAGCTCACAAGATCAAGATCATGGCCAAGGATTCTTATCCACAACTA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G61 CTTCACCTTATATACTTAATCCAGCTTGTTCTTCATCTCCATCAACTTCTTCGTCCTCAAGCTTGATACGAACCTTTTACGATCCCGAACCAAGTCCATA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 CTTCACCTTATATACTTAATCCAGCTTGTTCTTCATCTCCATCAACTTCTTCGTCCTCAAGCTTGATACGAACCTTTTACGATCCCGAACCAAGTCCATA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G61 CAACTTTGTCTCCACCACAAGTGGTTCAATCAACGATCCTCAACTTTCTTGGGCTAATAAGACAAATCCTCATCATCAAGTAGCTTATGGACTAATTAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 CAACTTTGTCTCCACCACAAGTGGTTCAATCAACGATCCTCAACTTTCTTGGGCTAATAAGACAAATCCTCATCATCAAGTAGCTTATGGACTAATTAAC 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G61 AGCTTCTCTAACAACGCAAACTCTCGACCCTTTTGGAATTCTTCATCAACCACTAACTTAAACAACACGACGCCGAGCAATTTTGTAACCACTCCGCAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 AGCTTCTCTAACAACGCAAACTCTCGACCCTTTTGGAATTCTTCATCAACCACTAACTTAAACAACACGACGCCGAGCAATTTTGTAACCACTCCGCAGA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G61 TAATATCTACTCGTTTGGAGGACAAAACCAAGAATCTGAAGACAAGAGCTCAGAGTGAGTCTTTGAAGAGAGCAAAGGATAATGAATCTGCGGCGAAGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 TAATATCTACTCGTTTGGAGGACAAAACCAAGAATCTGAAGACAAGAGCTCAGAGTGAGTCTTTGAAGAGAGCAAAGGATAATGAATCTGCGGCGAAGAA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G61 ACCGAGAGTCACCACGCCTTCACCGTTGCCAACTTTCAAGGTGAGAAAAGAGAATCTAAGGGACCAGATAACTTCATTACAACAACTAGTTTCACCTTTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 ACCGAGAGTCACCACGCCTTCACCGTTGCCAACTTTCAAGGTGAGAAAAGAGAATCTAAGGGACCAGATAACTTCATTACAACAACTAGTTTCACCTTTC 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT1G61 GGAAAGACAGATACTGCATCTGTTCTCCAAGAAGCTATAGAGTACATCAAGTTCCTTCACGACCAAGTCACTGTTCTAAGCACTCCATACATGAAACAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 GGAAAGACAGATACTGCATCTGTTCTCCAAGAAGCTATAGAGTACATCAAGTTCCTTCACGACCAAGTCACTGTTCTAAGCACTCCATACATGAAACAAG 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT1G61 GTGCCTCGAACCAACAACAACAGCAGATATCTGGTAAATCGAAGAGTCAAGATGAAAATGAGAATCACGAACTAAGAGGACATGGTCTATGTCTCGTCCC ::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: RE_021 GTGCCTCGAACCAACAACAACAGCAGATATCTGGTAAATCGAAGAGTCAAGATGAGAATGAGAATCACGAACTAAGAGGACATGGTCTATGTCTCGTCCC 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 AT1G61 AATATCAAGCACGTTTCCGGTGGCTAACGAAACAACAGCCGATTTTTGGACACCAACGTTTGGGGGCAACAATTTCAGG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 AATATCAAGCACGTTTCCGGTGGCTAACGAAACAACAGCCGATTTTTGGACACCAACGTTTGGGGGCAACAATTTCAGG 1110 1120 1130 1140 1150 1160 1170 10 20 30 40 50 60 70 80 90 100 AT1G61 MAEEFKATASICGGGGGAWWNSPRSVMSPSDHFLSPCFGAAITSNDFSSQENHLKSRMTCTDNNNIVFGQREADSDSGGSTVTMDSTLQMMGLGFSSNCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 MAEEFKATASICGGGGGAWWNSPRSVMSPSDHFLSPCFGAAITSNDFSSQENHLKSRMTCTDNNNIVFGQREADSDSGGSTVTMDSTLQMMGLGFSSNCS 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G61 SDWNQTILQEDLNSSFIRSSQDQDHGQGFLSTTTSPYILNPACSSSPSTSSSSSLIRTFYDPEPSPYNFVSTTSGSINDPQLSWANKTNPHHQVAYGLIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 SDWNQTILQEDLNSSFIRSSQDQDHGQGFLSTTTSPYILNPACSSSPSTSSSSSLIRTFYDPEPSPYNFVSTTSGSINDPQLSWANKTNPHHQVAYGLIN 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G61 SFSNNANSRPFWNSSSTTNLNNTTPSNFVTTPQIISTRLEDKTKNLKTRAQSESLKRAKDNESAAKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVSPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 SFSNNANSRPFWNSSSTTNLNNTTPSNFVTTPQIISTRLEDKTKNLKTRAQSESLKRAKDNESAAKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVSPF 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 AT1G61 GKTDTASVLQEAIEYIKFLHDQVTVLSTPYMKQGASNQQQQQISGKSKSQDENENHELRGHGLCLVPISSTFPVANETTADFWTPTFGGNNFR ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_021 GKTDTASVLQEAIEYIKFLHDQVTVLSTPYMKQGASNQQQQQISGKSKSQDENENHELRGHGLCLVPISSTFPVANETTADFWTPTFGGNNFR 310 320 330 340 350 360 370 380 390

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