◆◆◆RE_0222 detail◆◆◆

Code name	RE_0222
Locus	AT2G18300
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.40%一致
comment	0115_アミノ酸配列70%以上一致
sequence	>RE_0222_1011bp ATGTTGGAAGGTCTTGTCTCTCAAGAAAGCTTGTCCTTAAACTCTATGGACATGTCTGTACTTGAAAGGCTTAAATGGGTACAACAGCAACAACAGCAAC TGCAACAAGTTGTGTCCCATAGCAGTAATAATTCACCTGAACTTCTTCAGATACTTCAGTTCCATGGAAGCAACAATGATGAGTTGTTGGAGAGTAGTTT CAGCCAATTTCAAATGCTTGGATCTGGTTTTGGACCAAACTATAACATGGGTTTTGGTCCTCCACATGAATCCATTTCAAGAACAAGTAGCTGCCATATG GAACCTGTGGATACAATGGAGGTTTTGTTGAAGACCGGTGAAGAAACCAGAGCCGTTGCCTTGAAGAACAAGAGAAAACCAGAGGTTAAGACAAGGGAAG AGCAAAAGACAGAGAAGAAGATCAAAGTAGAGGCTGAGACAGAGTCAAGCATGAAAGGAAAATCAAACATGGGAAACACTGAAGCATCTTCAGACACTTC AAAGGAGACATCGAAAGGAGCTTCAGAGAATCAGAAATTAGATTATATCCACGTGAGAGCTCGTCGAGGCCAAGCCACTGACAGACACAGCTTAGCAGAA AGGGCGAGAAGAGAAAAGATCAGCAAGAAAATGAAATATCTGCAAGATATTGTGCCTGGATGCAATAAGGTCACAGGAAAAGCTGGTATGCTTGATGAGA TCATCAATTATGTTCAATGTCTCCAAAGACAAGTCGAGTTCCTGTCGATGAAACTTGCTGTCTTGAACCCGGAACTAGAGCTTGCCGTGGAAGATGTATC CGTAAAACAGTTTCAGGCTTACTTTACAAATGTAGTTGCTTCAAAGCAATCAATAATGGTTGATGTGCCATTGTTTCCGTTAGACCAGCAAGGATCTCTA GATTTGTCTGCGATAAACCCGAACCAAACGACATCTATCGAAGCTCCATCTGGAAGCTGGGAAACTCAATCACAGAGTCTCTACAACACATCTAGCCTCG GTTTTCATTAC >RE_0222_translated MLEGLVSQESLSLNSMDMSVLERLKWVQQQQQQLQQVVSHSSNNSPELLQILQFHGSNNDELLESSFSQFQMLGSGFGPNYNMGFGPPHESISRTSSCHM EPVDTMEVLLKTGEETRAVALKNKRKPEVKTREEQKTEKKIKVEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSLAE RARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELELAVEDVSVKQFQAYFTNVVASKQSIMVDVPLFPLDQQGSL DLSAINPNQTTSIEAPSGSWETQSQSLYNTSSLGFHY
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1005/1011 (99.4%)（アミノ酸配列で335/337 (99.4%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT2G18 ATGTTGGAAGGTCTTGTCTCTCAAGAAAGCTTGTCCTTAAACTCTATGGACATGTCTGTACTTGAAAGGCTTAAATGGGTACAACAGCAACAACAGCAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 ATGTTGGAAGGTCTTGTCTCTCAAGAAAGCTTGTCCTTAAACTCTATGGACATGTCTGTACTTGAAAGGCTTAAATGGGTACAACAGCAACAACAGCAAC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G18 TGCAACAAGTTGTGTCCCATAGCAGTAATAATTCACCTGAACTTCTTCAGATACTTCAGTTCCATGGAAGCAACAATGATGAGTTGTTGGAGAGTAGTTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 TGCAACAAGTTGTGTCCCATAGCAGTAATAATTCACCTGAACTTCTTCAGATACTTCAGTTCCATGGAAGCAACAATGATGAGTTGTTGGAGAGTAGTTT 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G18 CAGCCAATTTCAAATGCTTGGATCTGGTTTTGGACCAAACTATAACATGGGTTTTGGTCCTCCACATGAATCCATTTCAAGAACAAGTAGCTGCCATATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 CAGCCAATTTCAAATGCTTGGATCTGGTTTTGGACCAAACTATAACATGGGTTTTGGTCCTCCACATGAATCCATTTCAAGAACAAGTAGCTGCCATATG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT2G18 GAACCTGTGGATACAATGGAGGTTTTGTTGAAGACCGGTGAAGAAACCAGAGCCGTTGCCTTGAAGAACAAGAGAAAACCAGAGGTTAAGACAAGGGAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 GAACCTGTGGATACAATGGAGGTTTTGTTGAAGACCGGTGAAGAAACCAGAGCCGTTGCCTTGAAGAACAAGAGAAAACCAGAGGTTAAGACAAGGGAAG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT2G18 AGCAAAAGACAGAGAAGAAGATCAAAGTAGAGGCTGAGACAGAGTCAAGCATGAAAGGAAAATCAAACATGGGAAACACTGAAGCATCTTCAGACACTTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 AGCAAAAGACAGAGAAGAAGATCAAAGTAGAGGCTGAGACAGAGTCAAGCATGAAAGGAAAATCAAACATGGGAAACACTGAAGCATCTTCAGACACTTC 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT2G18 AAAGGAGACATCGAAAGGAGCTTCAGAGAATCAGAAATTAGATTATATCCACGTGAGAGCTCGTCGAGGCCAAGCCACTGACAGACACAGCTTAGCAGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 AAAGGAGACATCGAAAGGAGCTTCAGAGAATCAGAAATTAGATTATATCCACGTGAGAGCTCGTCGAGGCCAAGCCACTGACAGACACAGCTTAGCAGAA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT2G18 AGGGCGAGAAGAGAAAAGATCAGCAAGAAAATGAAATATCTGCAAGATATTGTGCCTGGATGCAATAAGGTCACAGGAAAAGCTGGTATGCTTGATGAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 AGGGCGAGAAGAGAAAAGATCAGCAAGAAAATGAAATATCTGCAAGATATTGTGCCTGGATGCAATAAGGTCACAGGAAAAGCTGGTATGCTTGATGAGA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT2G18 TCATCAATTATGTTCAATGTCTCCAAAGACAAGTCGAGTTCCTGTCGATGAAACTTGCTGTCTTGAACCCGGAACTAGAGCTTGCCGTGGAAGATGTATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 TCATCAATTATGTTCAATGTCTCCAAAGACAAGTCGAGTTCCTGTCGATGAAACTTGCTGTCTTGAACCCGGAACTAGAGCTTGCCGTGGAAGATGTATC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 AT2G18 CGTAAAA------CAGGCTTACTTTACAAATGTAGTTGCTTCAAAGCAATCAATAATGGTTGATGTGCCATTGTTTCCGTTAGACCAGCAAGGATCTCTA ::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 CGTAAAACAGTTTCAGGCTTACTTTACAAATGTAGTTGCTTCAAAGCAATCAATAATGGTTGATGTGCCATTGTTTCCGTTAGACCAGCAAGGATCTCTA 810 820 830 840 850 860 870 880 890 900 900 910 920 930 940 950 960 970 980 990 AT2G18 GATTTGTCTGCGATAAACCCGAACCAAACGACATCTATCGAAGCTCCATCTGGAAGCTGGGAAACTCAATCACAGAGTCTCTACAACACATCTAGCCTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 GATTTGTCTGCGATAAACCCGAACCAAACGACATCTATCGAAGCTCCATCTGGAAGCTGGGAAACTCAATCACAGAGTCTCTACAACACATCTAGCCTCG 910 920 930 940 950 960 970 980 990 1000 1000 AT2G18 GTTTTCATTAC ::::::::::: RE_022 GTTTTCATTAC 1010 10 20 30 40 50 60 70 80 90 100 AT2G18 MLEGLVSQESLSLNSMDMSVLERLKWVQQQQQQLQQVVSHSSNNSPELLQILQFHGSNNDELLESSFSQFQMLGSGFGPNYNMGFGPPHESISRTSSCHM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 MLEGLVSQESLSLNSMDMSVLERLKWVQQQQQQLQQVVSHSSNNSPELLQILQFHGSNNDELLESSFSQFQMLGSGFGPNYNMGFGPPHESISRTSSCHM 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G18 EPVDTMEVLLKTGEETRAVALKNKRKPEVKTREEQKTEKKIKVEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSLAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 EPVDTMEVLLKTGEETRAVALKNKRKPEVKTREEQKTEKKIKVEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSLAE 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 AT2G18 RARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELELAVEDVSVK--QAYFTNVVASKQSIMVDVPLFPLDQQGSL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::: RE_022 RARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELELAVEDVSVKQFQAYFTNVVASKQSIMVDVPLFPLDQQGSL 210 220 230 240 250 260 270 280 290 300 300 310 320 330 AT2G18 DLSAINPNQTTSIEAPSGSWETQSQSLYNTSSLGFHY ::::::::::::::::::::::::::::::::::::: RE_022 DLSAINPNQTTSIEAPSGSWETQSQSLYNTSSLGFHY 310 320 330

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