◆◆◆RE_0225 detail◆◆◆

Code name	RE_0225
Locus	AT2G22770
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列98.10%一致
comment	0420_アミノ酸配列70%以上一致
sequence	>RE_0225_942bp ATGGATTTGATGATCGACACTGACGAGTATCTGATCGATGACTGGGAATCCGATTTCCCGATATGCGGGGAAACTAACACCAACCCCGGTTCCGAGTCTG GATCTGGAACCGGGTTTGAGTTGCTAGCAGAAAGACCAACGAAGCAAATGAAAACCAACAACAACATGAATTCAACATCTTCTTCTCCGTCGTCTTCTTC TTCTTCTGGTTCTCGCACGTCACAAGTGATCTCATTTGGGTCTCCAGACACGAAAACCAACCCGGTCGAGACATCTTTGAACTTCTCCAACCAAGTAAGC ATGGATCAGAAAGTGGGGTCGAAAAGAAAAGATTGTGTTAACAATGGAGGAAGAAGAGAACCACATCTATTGAAAGAACATGTTTTGGCTGAACGAAAAC GTCGACAAAAGCTCAACGAGCGTTTGATTGCTCTCTCTGCTCTTCTTCCTGGCCTCAAAAAGACGGACAAGGCAACAGTTCTTGAAGATGCCATCAAACA TTTGAAACAACTTCAAGAGCGGGTAAAGAAGCTGGAGGAGGAGCGAGTGGTGACCAAGAAAATGGATCAATCAATTATATTGGTGAAGAGATCTCAAGTG TATTTAGATGATGATTCTTCATCTTATTCTTCTACTTGCTCTGCTGCGTCTCCTCTGTCTTCTTCTTCGGACGAAGTTTCGATCTTCAAACAAACAATGC CTATGATCGAAGCCCGAGTTTCAGACAGAGATTTGTTGATTAGAGTCCATTGTGAGAAGAACAAAGGGTGTATGATTAAGATCTTAAGTTCCTTGGAGAA GTTTCGTCTTGAAGTAGTCAATAGCTTCACTTTACCATTTGGAAATTCAACTCTCGTTATAACCATTCTCACTAAGATGGACAACAAATTTTCTCGACCA GTTGAAGAAGTGGTGAAGAACATAAGAGTTGCGTTAGCTGAA >RE_0225_translated MDLMIDTDEYLIDDWESDFPICGETNTNPGSESGSGTGFELLAERPTKQMKTNNNMNSTSSSPSSSSSSGSRTSQVISFGSPDTKTNPVETSLNFSNQVS MDQKVGSKRKDCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERVVTKKMDQSIILVKRSQV YLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPMIEARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFGNSTLVITILTKMDNKFSRP VEEVVKNIRVALAE
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 942/960 (98.1%)（アミノ酸配列で314/320 (98.1%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT2G22 ATGGATGATTCAAGCTTTATGGATTTGATGATCGACACTGACGAGTATCTGATCGATGACTGGGAATCCGATTTCCCGATATGCGGGGAAACTAACACCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 ------------------ATGGATTTGATGATCGACACTGACGAGTATCTGATCGATGACTGGGAATCCGATTTCCCGATATGCGGGGAAACTAACACCA 10 20 30 40 50 60 70 80 110 120 130 140 150 160 170 180 190 200 AT2G22 ACCCCGGTTCCGAGTCTGGATCTGGAACCGGGTTTGAGTTGCTAGCAGAAAGACCAACGAAGCAAATGAAAACCAACAACAACATGAATTCAACATCTTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 ACCCCGGTTCCGAGTCTGGATCTGGAACCGGGTTTGAGTTGCTAGCAGAAAGACCAACGAAGCAAATGAAAACCAACAACAACATGAATTCAACATCTTC 90 100 110 120 130 140 150 160 170 180 210 220 230 240 250 260 270 280 290 300 AT2G22 TTCTCCGTCGTCTTCTTCTTCTTCTGGTTCTCGCACGTCACAAGTGATCTCATTTGGGTCTCCAGACACGAAAACCAACCCGGTCGAGACATCTTTGAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 TTCTCCGTCGTCTTCTTCTTCTTCTGGTTCTCGCACGTCACAAGTGATCTCATTTGGGTCTCCAGACACGAAAACCAACCCGGTCGAGACATCTTTGAAC 190 200 210 220 230 240 250 260 270 280 310 320 330 340 350 360 370 380 390 400 AT2G22 TTCTCCAACCAAGTAAGCATGGATCAGAAAGTGGGGTCGAAAAGAAAAGATTGTGTTAACAATGGAGGAAGAAGAGAACCACATCTATTGAAAGAACATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 TTCTCCAACCAAGTAAGCATGGATCAGAAAGTGGGGTCGAAAAGAAAAGATTGTGTTAACAATGGAGGAAGAAGAGAACCACATCTATTGAAAGAACATG 290 300 310 320 330 340 350 360 370 380 410 420 430 440 450 460 470 480 490 500 AT2G22 TTTTGGCTGAACGAAAACGTCGACAAAAGCTCAACGAGCGTTTGATTGCTCTCTCTGCTCTTCTTCCTGGCCTCAAAAAGACGGACAAGGCAACAGTTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 TTTTGGCTGAACGAAAACGTCGACAAAAGCTCAACGAGCGTTTGATTGCTCTCTCTGCTCTTCTTCCTGGCCTCAAAAAGACGGACAAGGCAACAGTTCT 390 400 410 420 430 440 450 460 470 480 510 520 530 540 550 560 570 580 590 600 AT2G22 TGAAGATGCCATCAAACATTTGAAACAACTTCAAGAGCGGGTAAAGAAGCTGGAGGAGGAGCGAGTGGTGACCAAGAAAATGGATCAATCAATTATATTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 TGAAGATGCCATCAAACATTTGAAACAACTTCAAGAGCGGGTAAAGAAGCTGGAGGAGGAGCGAGTGGTGACCAAGAAAATGGATCAATCAATTATATTG 490 500 510 520 530 540 550 560 570 580 610 620 630 640 650 660 670 680 690 700 AT2G22 GTGAAGAGATCTCAAGTGTATTTAGATGATGATTCTTCATCTTATTCTTCTACTTGCTCTGCTGCGTCTCCTCTGTCTTCTTCTTCGGACGAAGTTTCGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 GTGAAGAGATCTCAAGTGTATTTAGATGATGATTCTTCATCTTATTCTTCTACTTGCTCTGCTGCGTCTCCTCTGTCTTCTTCTTCGGACGAAGTTTCGA 590 600 610 620 630 640 650 660 670 680 710 720 730 740 750 760 770 780 790 800 AT2G22 TCTTCAAACAAACAATGCCTATGATCGAAGCCCGAGTTTCAGACAGAGATTTGTTGATTAGAGTCCATTGTGAGAAGAACAAAGGGTGTATGATTAAGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 TCTTCAAACAAACAATGCCTATGATCGAAGCCCGAGTTTCAGACAGAGATTTGTTGATTAGAGTCCATTGTGAGAAGAACAAAGGGTGTATGATTAAGAT 690 700 710 720 730 740 750 760 770 780 810 820 830 840 850 860 870 880 890 900 AT2G22 CTTAAGTTCCTTGGAGAAGTTTCGTCTTGAAGTAGTCAATAGCTTCACTTTACCATTTGGAAATTCAACTCTCGTTATAACCATTCTCACTAAGATGGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 CTTAAGTTCCTTGGAGAAGTTTCGTCTTGAAGTAGTCAATAGCTTCACTTTACCATTTGGAAATTCAACTCTCGTTATAACCATTCTCACTAAGATGGAC 790 800 810 820 830 840 850 860 870 880 910 920 930 940 950 960 AT2G22 AACAAATTTTCTCGACCAGTTGAAGAAGTGGTGAAGAACATAAGAGTTGCGTTAGCTGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 AACAAATTTTCTCGACCAGTTGAAGAAGTGGTGAAGAACATAAGAGTTGCGTTAGCTGAA 890 900 910 920 930 940 10 20 30 40 50 60 70 80 90 100 AT2G22 MDDSSFMDLMIDTDEYLIDDWESDFPICGETNTNPGSESGSGTGFELLAERPTKQMKTNNNMNSTSSSPSSSSSSGSRTSQVISFGSPDTKTNPVETSLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 ------MDLMIDTDEYLIDDWESDFPICGETNTNPGSESGSGTGFELLAERPTKQMKTNNNMNSTSSSPSSSSSSGSRTSQVISFGSPDTKTNPVETSLN 10 20 30 40 50 60 70 80 90 110 120 130 140 150 160 170 180 190 200 AT2G22 FSNQVSMDQKVGSKRKDCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERVVTKKMDQSIIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 FSNQVSMDQKVGSKRKDCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERVVTKKMDQSIIL 100 110 120 130 140 150 160 170 180 190 210 220 230 240 250 260 270 280 290 300 AT2G22 VKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPMIEARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFGNSTLVITILTKMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 VKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPMIEARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFGNSTLVITILTKMD 200 210 220 230 240 250 260 270 280 290 310 320 AT2G22 NKFSRPVEEVVKNIRVALAE :::::::::::::::::::: RE_022 NKFSRPVEEVVKNIRVALAE 300 310

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