◆◆◆RE_0226 detail◆◆◆

Code name	RE_0226
Locus	AT2G24260
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment	0115_アミノ酸配列70%以上一致/0422_アミノ酸配列70%以上一致
sequence	>RE_0226_1050bp ATGATGAACTCTTCTCTTCTAACTCCTTCTTCTTCATCTTCTTCCCATATCCAAACTCCATCAACAACTTTCGACCACGAAGACTTCCTCGATCAAATCT TTTCCTCGGCCCCGTGGCCCTCCGTCGTCGATGATGCTCATCCTCTTCCCTCCGATGGCTTCCACGGCCACGATGTCGACTCAAGGAATCAGCCGATCAT GATGATGCCTTTGAATGATGGCTCCTCCGTCCACGCTCTTTATAATGGCTTCTCCGTCGCCGGATCTCTTCCTAACTTTCAAATCCCTCAGGGATCGGGA GGAGGATTGATTAACCAACAAGGACAAACGCAAACGCAAACGCAACCTCAGGCGAGCGCGTCTACAGCTACTGGTGGTACGGTGGCGGCTCCGCCGCAGA GTAGGACTAAAATCCGAGCTAGGAGAGGTCAAGCAACTGATCCTCATAGTATCGCCGAAAGGTTACGAAGAGAGAGAATTGCGGAAAGAATGAAAGCTCT TCAAGAACTCGTTCCTAACGGCAATAAGACAGACAAGGCATCGATGCTCGATGAGATCATAGATTATGTCAAGTTTTTACAACTCCAAGTCAAGGTACTG AGCATGAGCAGATTGGGAGGTGCTGCTTCCGTTTCTTCTCAAATCTCCGAGGCTGGTGGATCCCACGGGAACGCATCCTCCGCCATGGTCGGCGGTAGCC AGACGGCCGGAAACTCCAACGACAGCGTTACAATGACGGAACATCAAGTGGCCAAACTAATGGAAGAAGACATGGGCTCGGCCATGCAATATCTTCAAGG GAAAGGTCTTTGTCTCATGCCAATCTCTTTAGCCACCGCCATCTCAACCGCCACGTGTCACTCCCGTAACCCTTTGATCCCTGGAGCTGTTGCCGACGTC GGAGGTCCTTCCCCTCCCAATCTTTCTGGCATGACCATACAGTCGACGAGTACAAAAATGGGTAGCGGTAATGGGAAATTAAACGGTAACGGCGTGACCG AGAGGTCGTCTTCTATCGCCGTTAAAGAGGCCGTATCCGTTTCGAAAGCG >RE_0226_translated MMNSSLLTPSSSSSSHIQTPSTTFDHEDFLDQIFSSAPWPSVVDDAHPLPSDGFHGHDVDSRNQPIMMMPLNDGSSVHALYNGFSVAGSLPNFQIPQGSG GGLINQQGQTQTQTQPQASASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL SMSRLGGAASVSSQISEAGGSHGNASSAMVGGSQTAGNSNDSVTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNPLIPGAVADV GGPSPPNLSGMTIQSTSTKMGSGNGKLNGNGVTERSSSIAVKEAVSVSKA
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1049/1050 (99.9%)（アミノ酸配列で349/350 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT2G24 ATGATGAACTCTTCTCTTCTAACTCCTTCTTCTTCATCTTCTTCCCATATCCAAACTCCATCAACAACTTTCGACCACGAAGACTTCCTCGATCAAATCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 ATGATGAACTCTTCTCTTCTAACTCCTTCTTCTTCATCTTCTTCCCATATCCAAACTCCATCAACAACTTTCGACCACGAAGACTTCCTCGATCAAATCT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G24 TTTCCTCGGCCCCGTGGCCCTCCGTCGTCGATGATGCTCATCCTCTTCCCTCCGATGGCTTCCACGGCCACGATGTCGACTCAAGGAATCAGCCGATCAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 TTTCCTCGGCCCCGTGGCCCTCCGTCGTCGATGATGCTCATCCTCTTCCCTCCGATGGCTTCCACGGCCACGATGTCGACTCAAGGAATCAGCCGATCAT 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G24 GATGATGCCTTTGAATGATGGCTCCTCCGTCCACGCTCTTTATAATGGCTTCTCCGTCGCCGGATCTCTTCCTAACTTTCAAATCCCTCAGGGATCGGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 GATGATGCCTTTGAATGATGGCTCCTCCGTCCACGCTCTTTATAATGGCTTCTCCGTCGCCGGATCTCTTCCTAACTTTCAAATCCCTCAGGGATCGGGA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT2G24 GGAGGATTGATGAACCAACAAGGACAAACGCAAACGCAAACGCAACCTCAGGCGAGCGCGTCTACAGCTACTGGTGGTACGGTGGCGGCTCCGCCGCAGA ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 GGAGGATTGATTAACCAACAAGGACAAACGCAAACGCAAACGCAACCTCAGGCGAGCGCGTCTACAGCTACTGGTGGTACGGTGGCGGCTCCGCCGCAGA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT2G24 GTAGGACTAAAATCCGAGCTAGGAGAGGTCAAGCAACTGATCCTCATAGTATCGCCGAAAGGTTACGAAGAGAGAGAATTGCGGAAAGAATGAAAGCTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 GTAGGACTAAAATCCGAGCTAGGAGAGGTCAAGCAACTGATCCTCATAGTATCGCCGAAAGGTTACGAAGAGAGAGAATTGCGGAAAGAATGAAAGCTCT 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT2G24 TCAAGAACTCGTTCCTAACGGCAATAAGACAGACAAGGCATCGATGCTCGATGAGATCATAGATTATGTCAAGTTTTTACAACTCCAAGTCAAGGTACTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 TCAAGAACTCGTTCCTAACGGCAATAAGACAGACAAGGCATCGATGCTCGATGAGATCATAGATTATGTCAAGTTTTTACAACTCCAAGTCAAGGTACTG 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT2G24 AGCATGAGCAGATTGGGAGGTGCTGCTTCCGTTTCTTCTCAAATCTCCGAGGCTGGTGGATCCCACGGGAACGCATCCTCCGCCATGGTCGGCGGTAGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 AGCATGAGCAGATTGGGAGGTGCTGCTTCCGTTTCTTCTCAAATCTCCGAGGCTGGTGGATCCCACGGGAACGCATCCTCCGCCATGGTCGGCGGTAGCC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT2G24 AGACGGCCGGAAACTCCAACGACAGCGTTACAATGACGGAACATCAAGTGGCCAAACTAATGGAAGAAGACATGGGCTCGGCCATGCAATATCTTCAAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 AGACGGCCGGAAACTCCAACGACAGCGTTACAATGACGGAACATCAAGTGGCCAAACTAATGGAAGAAGACATGGGCTCGGCCATGCAATATCTTCAAGG 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT2G24 GAAAGGTCTTTGTCTCATGCCAATCTCTTTAGCCACCGCCATCTCAACCGCCACGTGTCACTCCCGTAACCCTTTGATCCCTGGAGCTGTTGCCGACGTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 GAAAGGTCTTTGTCTCATGCCAATCTCTTTAGCCACCGCCATCTCAACCGCCACGTGTCACTCCCGTAACCCTTTGATCCCTGGAGCTGTTGCCGACGTC 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT2G24 GGAGGTCCTTCCCCTCCCAATCTTTCTGGCATGACCATACAGTCGACGAGTACAAAAATGGGTAGCGGTAATGGGAAATTAAACGGTAACGGCGTGACCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 GGAGGTCCTTCCCCTCCCAATCTTTCTGGCATGACCATACAGTCGACGAGTACAAAAATGGGTAGCGGTAATGGGAAATTAAACGGTAACGGCGTGACCG 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 AT2G24 AGAGGTCGTCTTCTATCGCCGTTAAAGAGGCCGTATCCGTTTCGAAAGCG :::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 AGAGGTCGTCTTCTATCGCCGTTAAAGAGGCCGTATCCGTTTCGAAAGCG 1010 1020 1030 1040 1050 10 20 30 40 50 60 70 80 90 100 AT2G24 MMNSSLLTPSSSSSSHIQTPSTTFDHEDFLDQIFSSAPWPSVVDDAHPLPSDGFHGHDVDSRNQPIMMMPLNDGSSVHALYNGFSVAGSLPNFQIPQGSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 MMNSSLLTPSSSSSSHIQTPSTTFDHEDFLDQIFSSAPWPSVVDDAHPLPSDGFHGHDVDSRNQPIMMMPLNDGSSVHALYNGFSVAGSLPNFQIPQGSG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G24 GGLMNQQGQTQTQTQPQASASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 GGLINQQGQTQTQTQPQASASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G24 SMSRLGGAASVSSQISEAGGSHGNASSAMVGGSQTAGNSNDSVTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNPLIPGAVADV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 SMSRLGGAASVSSQISEAGGSHGNASSAMVGGSQTAGNSNDSVTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNPLIPGAVADV 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 AT2G24 GGPSPPNLSGMTIQSTSTKMGSGNGKLNGNGVTERSSSIAVKEAVSVSKA :::::::::::::::::::::::::::::::::::::::::::::::::: RE_022 GGPSPPNLSGMTIQSTSTKMGSGNGKLNGNGVTERSSSIAVKEAVSVSKA 310 320 330 340 350

このページのTOPに戻る