◆◆◆RE_0246 detail◆◆◆

Code name	RE_0246
Locus	AT3G23690
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.50%一致
comment	0428_アミノ酸配列70%以上一致
sequence	>RE_0246_1113bp ATGAACATGGACAAGGAAACAGAGCAAACCCTAAATTACTTACCTTTGGGTCAGAGCGATCCCTTTGGCAATGGCAATGAAGGAACAATTGGAGATTTCC TTGGAAGATACTGCAACAACCCTCAGGAGATTTCACCGTTAACTCTACAATCCCTCTCTCTGAATTCTCAGATCTCCGAGAATTTCCCAATCTCTGGTGG AATCAGATTCCCTCCATATCCAGGTCAATTTGGATCCGATCGTGAATTTGGGTCACAACCAACAACGCAGGAGAGTAACAAGAGCTCTTTGTTGGATCCA GATTCAGTTTCGGATCGAGTTCACACCACGAAATCTAACTCTAGAATGAGGAAGTCGATTCCTAGTGGTAATGGCAAGGAGTCTCCAGCTTCATCGTCTC TTACAGCTTCCAATTCAAAGGTTTCAGGAGAGAATGGTGGATCTAAAGGTGGGAAGAGAAGCAAGCAAGATGTAGCTGGGAGTAGTAAAAACGGAGTAGA GAAGTGCGATAGTAAAGGCGACAATAAGGACGATGCTAAGCCTCCTGAGGCGCCTAAAGATTATATTCATGTCAGAGCTAGAAGGGGTCAAGCAACTGAT AGCCATAGTCTTGCTGAAAGAGCAAGAAGAGAAAAGATTAGTGAGAGAATGACGTTGCTTCAGGATCTGGTTCCTGGTTGCAACCGGATTACAGGGAAAG CAGTCATGCTTGATGAAATTATAAATTATGTGCAGTCCTTGCAGAGACAAGTTGAGTTCTTGTCCATGAAGCTGGCTACCGTAAATCCAAGGATGGAGTT TAATGCTAATGCTTCTTTATCCACAGAGATGATTCAACCGGGGGAGTCGTTAACGCAGTCTCTTTACGCAATGGCTTGCTCAGAGCAAAGACTTCCATCA GCATACTATTCACTTGGCAAGAACATGCCAAGATTCTCAGACACACAATTCCCCTCAAACGATGGATTTGTTCACACTGAGACACCAGGATTCTGGGAAA ATAATGACCTGCAAAGCATTGTTCAGATGGGTTTTGGAGATATCCTCCAGCAACAGAGCAACAACAACAACAACAACTGTTCTGAGCCAACACTTCAGAT GAAGCTTGAACCA >RE_0246_translated MNMDKETEQTLNYLPLGQSDPFGNGNEGTIGDFLGRYCNNPQEISPLTLQSLSLNSQISENFPISGGIRFPPYPGQFGSDREFGSQPTTQESNKSSLLDP DSVSDRVHTTKSNSRMRKSIPSGNGKESPASSSLTASNSKVSGENGGSKGGKRSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAPKDYIHVRARRGQATD SHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNANASLSTEMIQPGESLTQSLYAMACSEQRLPS AYYSLGKNMPRFSDTQFPSNDGFVHTETPGFWENNDLQSIVQMGFGDILQQQSNNNNNNCSEPTLQMKLEP
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1110/1113 (99.7%)（アミノ酸配列で369/371 (99.5%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT3G23 ATGAACATGGACAAGGAAACAGAGCAAACCCTAAATTACTTACCTTTGGGTCAGAGCGATCCCTTTGGCAATGGCAATGAAGGAACAATTGGAGATTTCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_024 ATGAACATGGACAAGGAAACAGAGCAAACCCTAAATTACTTACCTTTGGGTCAGAGCGATCCCTTTGGCAATGGCAATGAAGGAACAATTGGAGATTTCC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G23 TTGGAAGATACTGCAACAACCCTCAGGAGATTTCACCGTTAACTCTACAATCCTTCTCTCTGAATTCTCAGATCTCCGAGAATTTCCCAATCTCTGGTGG ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::: RE_024 TTGGAAGATACTGCAACAACCCTCAGGAGATTTCACCGTTAACTCTACAATCCCTCTCTCTGAATTCTCAGATCTCCGAGAATTTCCCAATCTCTGGTGG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G23 AATCAGATTCCCTCCATATCCAGGTCAATTTGGATCCGATCGTGAATTTGGGTCACAACCAACAACGCAGGAGAGTAACAAGAGCTCTTTGTTGGATCCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_024 AATCAGATTCCCTCCATATCCAGGTCAATTTGGATCCGATCGTGAATTTGGGTCACAACCAACAACGCAGGAGAGTAACAAGAGCTCTTTGTTGGATCCA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT3G23 GATTCAGTTTCGGATCGAGTTCACACCACGAAATCTAACTCTAGAAAGAGGAAGTCGATTCCTAGTGGTAATGGCAAGGAGTCTCCAGCTTCATCGTCTC :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_024 GATTCAGTTTCGGATCGAGTTCACACCACGAAATCTAACTCTAGAATGAGGAAGTCGATTCCTAGTGGTAATGGCAAGGAGTCTCCAGCTTCATCGTCTC 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT3G23 TTACAGCTTCCAATTCAAAGGTTTCAGGAGAGAATGGTGGATCTAAAGGTGGGAAGAGAAGCAAGCAAGATGTAGCTGGGAGTAGTAAAAACGGAGTAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_024 TTACAGCTTCCAATTCAAAGGTTTCAGGAGAGAATGGTGGATCTAAAGGTGGGAAGAGAAGCAAGCAAGATGTAGCTGGGAGTAGTAAAAACGGAGTAGA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT3G23 GAAGTGCGATAGTAAAGGCGACAATAAGGACGATGCTAAGCCTCCTGAGGCGCCTAAAGATTATATTCATGTCAGAGCTAGAAGGGGTCAAGCAACTGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_024 GAAGTGCGATAGTAAAGGCGACAATAAGGACGATGCTAAGCCTCCTGAGGCGCCTAAAGATTATATTCATGTCAGAGCTAGAAGGGGTCAAGCAACTGAT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT3G23 AGCCATAGTCTTGCTGAAAGAGCAAGAAGAGAAAAGATTAGTGAGAGAATGACGTTGCTTCAGGATCTGGTTCCTGGTTGCAACCGGATTACAGGGAAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_024 AGCCATAGTCTTGCTGAAAGAGCAAGAAGAGAAAAGATTAGTGAGAGAATGACGTTGCTTCAGGATCTGGTTCCTGGTTGCAACCGGATTACAGGGAAAG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT3G23 CAGTCATGCTTGATGAAATTATAAATTATGTGCAGTCCTTGCAGAGACAAGTTGAGTTCTTGTCCATGAAGCTGGCTACCGTAAATCCAAGGATGGAGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_024 CAGTCATGCTTGATGAAATTATAAATTATGTGCAGTCCTTGCAGAGACAAGTTGAGTTCTTGTCCATGAAGCTGGCTACCGTAAATCCAAGGATGGAGTT 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT3G23 TAATGCTAATGCTTCTTTATCCACAGAGATGATTCAACCGGGGGAGTCGTTAACGCAGTCTCTTTACGCAATGGCTTGCTCAGAGCAAAGACTTCCATCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_024 TAATGCTAATGCTTCTTTATCCACAGAGATGATTCAACCGGGGGAGTCGTTAACGCAGTCTCTTTACGCAATGGCTTGCTCAGAGCAAAGACTTCCATCA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT3G23 GCATACTATTCACTTGGCAAGAACATGCCAAGATTCTCAGACACACAATTCCCCTCAAACGATGGATTTGTTCACACTGAGACACCAGGATTCTGGGAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_024 GCATACTATTCACTTGGCAAGAACATGCCAAGATTCTCAGACACACAATTCCCCTCAAACGATGGATTTGTTCACACTGAGACACCAGGATTCTGGGAAA 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT3G23 ATAATGACCTGCAAAGCATTGTTCAGATGGGTTTTGGAGATATCCTCCAGCAACAGAGCAACAACAACAACAACAACTGTTCTGAGCCAACGCTTCAGAT ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: RE_024 ATAATGACCTGCAAAGCATTGTTCAGATGGGTTTTGGAGATATCCTCCAGCAACAGAGCAACAACAACAACAACAACTGTTCTGAGCCAACACTTCAGAT 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 AT3G23 GAAGCTTGAACCA ::::::::::::: RE_024 GAAGCTTGAACCA 1110 10 20 30 40 50 60 70 80 90 100 AT3G23 MNMDKETEQTLNYLPLGQSDPFGNGNEGTIGDFLGRYCNNPQEISPLTLQSFSLNSQISENFPISGGIRFPPYPGQFGSDREFGSQPTTQESNKSSLLDP ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: RE_024 MNMDKETEQTLNYLPLGQSDPFGNGNEGTIGDFLGRYCNNPQEISPLTLQSLSLNSQISENFPISGGIRFPPYPGQFGSDREFGSQPTTQESNKSSLLDP 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G23 DSVSDRVHTTKSNSRKRKSIPSGNGKESPASSSLTASNSKVSGENGGSKGGKRSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAPKDYIHVRARRGQATD ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_024 DSVSDRVHTTKSNSRMRKSIPSGNGKESPASSSLTASNSKVSGENGGSKGGKRSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAPKDYIHVRARRGQATD 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G23 SHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNANASLSTEMIQPGESLTQSLYAMACSEQRLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_024 SHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNANASLSTEMIQPGESLTQSLYAMACSEQRLPS 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 AT3G23 AYYSLGKNMPRFSDTQFPSNDGFVHTETPGFWENNDLQSIVQMGFGDILQQQSNNNNNNCSEPTLQMKLEP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_024 AYYSLGKNMPRFSDTQFPSNDGFVHTETPGFWENNDLQSIVQMGFGDILQQQSNNNNNNCSEPTLQMKLEP 310 320 330 340 350 360 370

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