◆◆◆RE_0265 detail◆◆◆

Code name	RE_0265
Locus	AT4G16430
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment	0311_アミノ酸配列100%一致
sequence	>RE_0265_1401bp ATGGGTCAAAAGTTTTGGGAGAATCAAGAAGATCGAGCGATGGTTGAATCCACCATAGGCTCTGAGGCTTGCGACTTTTTCATCTCAACAGCTTCAGCTT CCAACACTGCCTTGTCCAAGCTTGTCTCACCACCAAGTGATTCCAATCTCCAACAAGGGTTACGTCACGTTGTTGAAGGATCTGATTGGGATTATGCTCT TTTCTGGCTAGCGTCCAACGTTAATAGCTCTGATGGTTGTGTCTTGATCTGGGGAGATGGTCATTGCCGTGTCAAAAAGGGTGCTTCAGGTGAGGATTAC TCTCAGCAAGATGAGATCAAAAGACGTGTGCTTCGCAAGCTTCACTTGTCGTTCGTTGGTTCAGATGAAGATCATCGTTTGGTGAAATCAGGAGCTCTTA CTGATCTCGACATGTTTTATCTGGCTTCTTTGTACTTTTCCTTTAGGTGTGATACCAATAAGTACGGTCCTGCTGGAACCTATGTGTCTGGGAAGCCTCT TTGGGCTGCAGATTTGCCTAGCTGCTTGAGTTATTATAGGGTTAGGTCTTTCTTAGCTAGGTCAGCTGGTTTTCAGACTGTGTTGTCTGTACCAGTGAAT TCTGGAGTTGTGGAGCTTGGTTCTTTAAGACATATTCCAGAAGATAAGAGTGTGATTGAGATGGTGAAATCAGTGTTTGGTGGGTCTGACTTTGTTCAGG CTAAAGAAGCTCCTAAAATCTTTGGTCGACAGCTGAGTCTTGGTGGAGCAAAACCTCGGTCTATGAGTATTAATTTCTCCCCGAAGACCGAGGATGACAC GGGTTTCTCATTGGAATCGTATGAGGTGCAAGCGATCGGAGGCTCTAATCAAGTGTATGGTTATGAGCAAGGGAAAGATGAGACATTGTATCTAACTGAC GAGCAAAAGCCGAGGAAGAGAGGGAGAAAACCAGCAAATGGAAGAGAAGAGGCTCTAAACCATGTGGAAGCGGAACGGCAGAGGAGGGAGAAGCTGAACC AGAGATTCTACGCTTTGAGAGCGGTGGTGCCTAACATCTCCAAGATGGACAAGGCTTCGCTCCTTGCAGACGCAATCACTTACATCACGGATATGCAGAA GAAAATCAGGGTGTATGAAACAGAGAAGCAGATAATGAAGAGGAGGGAGAGTAATCAGATAACTCCAGCAGAGGTTGATTATCAACAGAGGCATGATGAT GCAGTTGTAAGGCTAAGCTGTCCGTTGGAAACTCATCCAGTTTCAAAGGTGATACAAACGTTGAGGGAGAATGAAGTTATGCCTCATGATTCCAACGTGG CCATCACAGAGGAGGGTGTGGTTCACACATTCACTCTCCGGCCTCAGGGTGGCTGCACCGCTGAGCAGTTGAAGGACAAGCTCCTTGCCTCTCTATCACA G >RE_0265_translated MGQKFWENQEDRAMVESTIGSEACDFFISTASASNTALSKLVSPPSDSNLQQGLRHVVEGSDWDYALFWLASNVNSSDGCVLIWGDGHCRVKKGASGEDY SQQDEIKRRVLRKLHLSFVGSDEDHRLVKSGALTDLDMFYLASLYFSFRCDTNKYGPAGTYVSGKPLWAADLPSCLSYYRVRSFLARSAGFQTVLSVPVN SGVVELGSLRHIPEDKSVIEMVKSVFGGSDFVQAKEAPKIFGRQLSLGGAKPRSMSINFSPKTEDDTGFSLESYEVQAIGGSNQVYGYEQGKDETLYLTD EQKPRKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETEKQIMKRRESNQITPAEVDYQQRHDD AVVRLSCPLETHPVSKVIQTLRENEVMPHDSNVAITEEGVVHTFTLRPQGGCTAEQLKDKLLASLSQ
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1400/1401 (99.9%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT4G16 ATGGGTCAAAAGTTTTGGGAGAATCAAGAAGATCGAGCGATGGTTGAATCCACCATAGGCTCTGAAGCTTGCGACTTTTTCATCTCAACAGCTTCAGCTT ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::: RE_026 ATGGGTCAAAAGTTTTGGGAGAATCAAGAAGATCGAGCGATGGTTGAATCCACCATAGGCTCTGAGGCTTGCGACTTTTTCATCTCAACAGCTTCAGCTT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT4G16 CCAACACTGCCTTGTCCAAGCTTGTCTCACCACCAAGTGATTCCAATCTCCAACAAGGGTTACGTCACGTTGTTGAAGGATCTGATTGGGATTATGCTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_026 CCAACACTGCCTTGTCCAAGCTTGTCTCACCACCAAGTGATTCCAATCTCCAACAAGGGTTACGTCACGTTGTTGAAGGATCTGATTGGGATTATGCTCT 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT4G16 TTTCTGGCTAGCGTCCAACGTTAATAGCTCTGATGGTTGTGTCTTGATCTGGGGAGATGGTCATTGCCGTGTCAAAAAGGGTGCTTCAGGTGAGGATTAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_026 TTTCTGGCTAGCGTCCAACGTTAATAGCTCTGATGGTTGTGTCTTGATCTGGGGAGATGGTCATTGCCGTGTCAAAAAGGGTGCTTCAGGTGAGGATTAC 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT4G16 TCTCAGCAAGATGAGATCAAAAGACGTGTGCTTCGCAAGCTTCACTTGTCGTTCGTTGGTTCAGATGAAGATCATCGTTTGGTGAAATCAGGAGCTCTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_026 TCTCAGCAAGATGAGATCAAAAGACGTGTGCTTCGCAAGCTTCACTTGTCGTTCGTTGGTTCAGATGAAGATCATCGTTTGGTGAAATCAGGAGCTCTTA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT4G16 CTGATCTCGACATGTTTTATCTGGCTTCTTTGTACTTTTCCTTTAGGTGTGATACCAATAAGTACGGTCCTGCTGGAACCTATGTGTCTGGGAAGCCTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_026 CTGATCTCGACATGTTTTATCTGGCTTCTTTGTACTTTTCCTTTAGGTGTGATACCAATAAGTACGGTCCTGCTGGAACCTATGTGTCTGGGAAGCCTCT 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT4G16 TTGGGCTGCAGATTTGCCTAGCTGCTTGAGTTATTATAGGGTTAGGTCTTTCTTAGCTAGGTCAGCTGGTTTTCAGACTGTGTTGTCTGTACCAGTGAAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_026 TTGGGCTGCAGATTTGCCTAGCTGCTTGAGTTATTATAGGGTTAGGTCTTTCTTAGCTAGGTCAGCTGGTTTTCAGACTGTGTTGTCTGTACCAGTGAAT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT4G16 TCTGGAGTTGTGGAGCTTGGTTCTTTAAGACATATTCCAGAAGATAAGAGTGTGATTGAGATGGTGAAATCAGTGTTTGGTGGGTCTGACTTTGTTCAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_026 TCTGGAGTTGTGGAGCTTGGTTCTTTAAGACATATTCCAGAAGATAAGAGTGTGATTGAGATGGTGAAATCAGTGTTTGGTGGGTCTGACTTTGTTCAGG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT4G16 CTAAAGAAGCTCCTAAAATCTTTGGTCGACAGCTGAGTCTTGGTGGAGCAAAACCTCGGTCTATGAGTATTAATTTCTCCCCGAAGACCGAGGATGACAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_026 CTAAAGAAGCTCCTAAAATCTTTGGTCGACAGCTGAGTCTTGGTGGAGCAAAACCTCGGTCTATGAGTATTAATTTCTCCCCGAAGACCGAGGATGACAC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT4G16 GGGTTTCTCATTGGAATCGTATGAGGTGCAAGCGATCGGAGGCTCTAATCAAGTGTATGGTTATGAGCAAGGGAAAGATGAGACATTGTATCTAACTGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_026 GGGTTTCTCATTGGAATCGTATGAGGTGCAAGCGATCGGAGGCTCTAATCAAGTGTATGGTTATGAGCAAGGGAAAGATGAGACATTGTATCTAACTGAC 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT4G16 GAGCAAAAGCCGAGGAAGAGAGGGAGAAAACCAGCAAATGGAAGAGAAGAGGCTCTAAACCATGTGGAAGCGGAACGGCAGAGGAGGGAGAAGCTGAACC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_026 GAGCAAAAGCCGAGGAAGAGAGGGAGAAAACCAGCAAATGGAAGAGAAGAGGCTCTAAACCATGTGGAAGCGGAACGGCAGAGGAGGGAGAAGCTGAACC 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT4G16 AGAGATTCTACGCTTTGAGAGCGGTGGTGCCTAACATCTCCAAGATGGACAAGGCTTCGCTCCTTGCAGACGCAATCACTTACATCACGGATATGCAGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_026 AGAGATTCTACGCTTTGAGAGCGGTGGTGCCTAACATCTCCAAGATGGACAAGGCTTCGCTCCTTGCAGACGCAATCACTTACATCACGGATATGCAGAA 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 AT4G16 GAAAATCAGGGTGTATGAAACAGAGAAGCAGATAATGAAGAGGAGGGAGAGTAATCAGATAACTCCAGCAGAGGTTGATTATCAACAGAGGCATGATGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_026 GAAAATCAGGGTGTATGAAACAGAGAAGCAGATAATGAAGAGGAGGGAGAGTAATCAGATAACTCCAGCAGAGGTTGATTATCAACAGAGGCATGATGAT 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 AT4G16 GCAGTTGTAAGGCTAAGCTGTCCGTTGGAAACTCATCCAGTTTCAAAGGTGATACAAACGTTGAGGGAGAATGAAGTTATGCCTCATGATTCCAACGTGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_026 GCAGTTGTAAGGCTAAGCTGTCCGTTGGAAACTCATCCAGTTTCAAAGGTGATACAAACGTTGAGGGAGAATGAAGTTATGCCTCATGATTCCAACGTGG 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 1390 1400 AT4G16 CCATCACAGAGGAGGGTGTGGTTCACACATTCACTCTCCGGCCTCAGGGTGGCTGCACCGCTGAGCAGTTGAAGGACAAGCTCCTTGCCTCTCTATCACA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_026 CCATCACAGAGGAGGGTGTGGTTCACACATTCACTCTCCGGCCTCAGGGTGGCTGCACCGCTGAGCAGTTGAAGGACAAGCTCCTTGCCTCTCTATCACA 1310 1320 1330 1340 1350 1360 1370 1380 1390 1400 AT4G16 G : RE_026 G 10 20 30 40 50 60 70 80 90 100 AT4G16 MGQKFWENQEDRAMVESTIGSEACDFFISTASASNTALSKLVSPPSDSNLQQGLRHVVEGSDWDYALFWLASNVNSSDGCVLIWGDGHCRVKKGASGEDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_026 MGQKFWENQEDRAMVESTIGSEACDFFISTASASNTALSKLVSPPSDSNLQQGLRHVVEGSDWDYALFWLASNVNSSDGCVLIWGDGHCRVKKGASGEDY 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT4G16 SQQDEIKRRVLRKLHLSFVGSDEDHRLVKSGALTDLDMFYLASLYFSFRCDTNKYGPAGTYVSGKPLWAADLPSCLSYYRVRSFLARSAGFQTVLSVPVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_026 SQQDEIKRRVLRKLHLSFVGSDEDHRLVKSGALTDLDMFYLASLYFSFRCDTNKYGPAGTYVSGKPLWAADLPSCLSYYRVRSFLARSAGFQTVLSVPVN 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT4G16 SGVVELGSLRHIPEDKSVIEMVKSVFGGSDFVQAKEAPKIFGRQLSLGGAKPRSMSINFSPKTEDDTGFSLESYEVQAIGGSNQVYGYEQGKDETLYLTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_026 SGVVELGSLRHIPEDKSVIEMVKSVFGGSDFVQAKEAPKIFGRQLSLGGAKPRSMSINFSPKTEDDTGFSLESYEVQAIGGSNQVYGYEQGKDETLYLTD 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT4G16 EQKPRKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETEKQIMKRRESNQITPAEVDYQQRHDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_026 EQKPRKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETEKQIMKRRESNQITPAEVDYQQRHDD 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 AT4G16 AVVRLSCPLETHPVSKVIQTLRENEVMPHDSNVAITEEGVVHTFTLRPQGGCTAEQLKDKLLASLSQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_026 AVVRLSCPLETHPVSKVIQTLRENEVMPHDSNVAITEEGVVHTFTLRPQGGCTAEQLKDKLLASLSQ 410 420 430 440 450 460

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