◆◆◆RE_0274 detail◆◆◆

Code name	RE_0274
Locus	AT4G34530
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment	0115_アミノ酸配列70%以上一致/0422_アミノ酸配列70%以上一致
sequence	>RE_0274_1005bp ATGAATGGAGCTATAGGAGGTGACCTTTTGCTCAATTTTCCTAACATGTCGGTCCTAGAGCGCCAAAGGGCTCACCTCAAGTACCTCAATCCCACCTTTG ATTCTCCTCTCGCCGGCTTCTTTGCCGATTCTTCAATGATTACCGGCGGCGAGATGGACAGCTATCTTTCGACTGCCGGTTTGAATCTTCCGATGATGTA CGGTGAGACGACGGTGGAAGGTGATTCAAGACTCTCAATTTCGCCGGAAACGACGCTTGGGACTGGAAATTTCAAGAAACGGAAGTTTGATACAGAGACT AAGGATTGTAATGAGAAGAAGAAGAAGATGACGATGAACAGAGATGACCTAGTAGAAGAAGGAGAAGAAGAGAAGTCGAAAATAACAGAGCAAAACAATG GGAGCACAAAAAGCATCAAGAAGATGAAACACAAAGCCAAGAAAGAAGAGAACAATTTCTCTAATGATTCATCTAAAGTGACGAAGGAATTGGAGAAAAC GGATTATATTCATGTTCGTGCACGACGAGGCCAAGCCACTGATAGTCACAGCATAGCAGAACGAGTTAGAAGAGAAAAGATCAGTGAGAGAATGAAGTTT CTACAAGATTTGGTTCCTGGATGCGACAAGATCACAGGCAAAGCAGGGATGCTTGATGAAATCATTAACTATGTTCAGTCTCTTCAGAGACAAATCGAGT TCTTATCGATGAAACTAGCAATTGTGAATCCAAGGCCGGATTTTGATATGGATGACATTTTTGCCAAAGAGGTTGCCTCAACTCCAATGACTGTGGTGCC ATCTCCTGAAATGGTTCTTTCCGGTTATTCTCATGAGATGGTTCACTCTGGTTATTCTAGTGAGATGGTTAACTCCGGTTACCTTCATGTCAATCCAATG CAGCAAGTGAATACCAGTTCTGATCCATTGTCATGCTTCAACAATGGCGAAGCTCCTTCGATGTGGGACTCTCATGTGCAGAATCTCTATGGCAATTTAG GAGTT >RE_0274_translated MNGAIGGDLLLNFPNMSVLERQRAHLKYLNPTFDSPLAGFFADSSMITGGEMDSYLSTAGLNLPMMYGETTVEGDSRLSISPETTLGTGNFKKRKFDTET KDCNEKKKKMTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKF LQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEVASTPMTVVPSPEMVLSGYSHEMVHSGYSSEMVNSGYLHVNPM QQVNTSSDPLSCFNNGEAPSMWDSHVQNLYGNLGV
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1004/1005 (99.9%)（アミノ酸配列で334/335 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT4G34 ATGAATGGAGCTATAGGAGGTGACCTTTTGCTCAATTTTCCTGACATGTCGGTCCTAGAGCGCCAAAGGGCTCACCTCAAGTACCTCAATCCCACCTTTG :::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_027 ATGAATGGAGCTATAGGAGGTGACCTTTTGCTCAATTTTCCTAACATGTCGGTCCTAGAGCGCCAAAGGGCTCACCTCAAGTACCTCAATCCCACCTTTG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT4G34 ATTCTCCTCTCGCCGGCTTCTTTGCCGATTCTTCAATGATTACCGGCGGCGAGATGGACAGCTATCTTTCGACTGCCGGTTTGAATCTTCCGATGATGTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_027 ATTCTCCTCTCGCCGGCTTCTTTGCCGATTCTTCAATGATTACCGGCGGCGAGATGGACAGCTATCTTTCGACTGCCGGTTTGAATCTTCCGATGATGTA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT4G34 CGGTGAGACGACGGTGGAAGGTGATTCAAGACTCTCAATTTCGCCGGAAACGACGCTTGGGACTGGAAATTTCAAGAAACGGAAGTTTGATACAGAGACT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_027 CGGTGAGACGACGGTGGAAGGTGATTCAAGACTCTCAATTTCGCCGGAAACGACGCTTGGGACTGGAAATTTCAAGAAACGGAAGTTTGATACAGAGACT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT4G34 AAGGATTGTAATGAGAAGAAGAAGAAGATGACGATGAACAGAGATGACCTAGTAGAAGAAGGAGAAGAAGAGAAGTCGAAAATAACAGAGCAAAACAATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_027 AAGGATTGTAATGAGAAGAAGAAGAAGATGACGATGAACAGAGATGACCTAGTAGAAGAAGGAGAAGAAGAGAAGTCGAAAATAACAGAGCAAAACAATG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT4G34 GGAGCACAAAAAGCATCAAGAAGATGAAACACAAAGCCAAGAAAGAAGAGAACAATTTCTCTAATGATTCATCTAAAGTGACGAAGGAATTGGAGAAAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_027 GGAGCACAAAAAGCATCAAGAAGATGAAACACAAAGCCAAGAAAGAAGAGAACAATTTCTCTAATGATTCATCTAAAGTGACGAAGGAATTGGAGAAAAC 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT4G34 GGATTATATTCATGTTCGTGCACGACGAGGCCAAGCCACTGATAGTCACAGCATAGCAGAACGAGTTAGAAGAGAAAAGATCAGTGAGAGAATGAAGTTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_027 GGATTATATTCATGTTCGTGCACGACGAGGCCAAGCCACTGATAGTCACAGCATAGCAGAACGAGTTAGAAGAGAAAAGATCAGTGAGAGAATGAAGTTT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT4G34 CTACAAGATTTGGTTCCTGGATGCGACAAGATCACAGGCAAAGCAGGGATGCTTGATGAAATCATTAACTATGTTCAGTCTCTTCAGAGACAAATCGAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_027 CTACAAGATTTGGTTCCTGGATGCGACAAGATCACAGGCAAAGCAGGGATGCTTGATGAAATCATTAACTATGTTCAGTCTCTTCAGAGACAAATCGAGT 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT4G34 TCTTATCGATGAAACTAGCAATTGTGAATCCAAGGCCGGATTTTGATATGGATGACATTTTTGCCAAAGAGGTTGCCTCAACTCCAATGACTGTGGTGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_027 TCTTATCGATGAAACTAGCAATTGTGAATCCAAGGCCGGATTTTGATATGGATGACATTTTTGCCAAAGAGGTTGCCTCAACTCCAATGACTGTGGTGCC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT4G34 ATCTCCTGAAATGGTTCTTTCCGGTTATTCTCATGAGATGGTTCACTCTGGTTATTCTAGTGAGATGGTTAACTCCGGTTACCTTCATGTCAATCCAATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_027 ATCTCCTGAAATGGTTCTTTCCGGTTATTCTCATGAGATGGTTCACTCTGGTTATTCTAGTGAGATGGTTAACTCCGGTTACCTTCATGTCAATCCAATG 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT4G34 CAGCAAGTGAATACCAGTTCTGATCCATTGTCATGCTTCAACAATGGCGAAGCTCCTTCGATGTGGGACTCTCATGTGCAGAATCTCTATGGCAATTTAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_027 CAGCAAGTGAATACCAGTTCTGATCCATTGTCATGCTTCAACAATGGCGAAGCTCCTTCGATGTGGGACTCTCATGTGCAGAATCTCTATGGCAATTTAG 910 920 930 940 950 960 970 980 990 1000 AT4G34 GAGTT ::::: RE_027 GAGTT 10 20 30 40 50 60 70 80 90 100 AT4G34 MNGAIGGDLLLNFPDMSVLERQRAHLKYLNPTFDSPLAGFFADSSMITGGEMDSYLSTAGLNLPMMYGETTVEGDSRLSISPETTLGTGNFKKRKFDTET ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_027 MNGAIGGDLLLNFPNMSVLERQRAHLKYLNPTFDSPLAGFFADSSMITGGEMDSYLSTAGLNLPMMYGETTVEGDSRLSISPETTLGTGNFKKRKFDTET 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT4G34 KDCNEKKKKMTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_027 KDCNEKKKKMTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKF 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT4G34 LQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEVASTPMTVVPSPEMVLSGYSHEMVHSGYSSEMVNSGYLHVNPM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_027 LQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEVASTPMTVVPSPEMVLSGYSHEMVHSGYSSEMVNSGYLHVNPM 210 220 230 240 250 260 270 280 290 300 310 320 330 AT4G34 QQVNTSSDPLSCFNNGEAPSMWDSHVQNLYGNLGV ::::::::::::::::::::::::::::::::::: RE_027 QQVNTSSDPLSCFNNGEAPSMWDSHVQNLYGNLGV 310 320 330

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