◆◆◆RE_0295 detail◆◆◆

Code name	RE_0295
Locus	AT5G64340
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.40%一致
comment	0115_アミノ酸配列70%以上一致/0422_アミノ酸配列70%以上一致
sequence	>RE_0295_1044bp ATGCCTCTGGATAAGAGGCAACGGGATTTGCCTCTGGGCTTAAGTCCTCAAGCTTGCTTCAAGGATATAGTAGGTCGGTCTGTCCTTCCTAGAATTCCTC TCCCTGAGCTTGGGAAACTATATGCAGCTAAGCTTCAGGCTCGCTGTTTGCAGCCACCACCATTCCAGCCTTTGCTGTGCAGTCATGATAAGGAGTCTTA TGGAAAAAGATTCTCACGGTCTGACATGCGGTCTTGGTGCGCTGCTGCTACTACTACTACTACTCCACTTGGAGCATTAGAGTCTTCTCAGAAAAGACTT TTGATATTCGATCAGTCAGGAGACCAGACTCGTCTATTACAATGTCCATTTCCTCTACGGTTTCCATCTCATGCGGCTGCAGAACCAGTGAAACTCTCTG AGTTACAAGGTATAGAGAAAGCTTTCAAAGAAGATGGTGAAGAGTTTCACAAGAGTGATGGAACAGAGTCAGAAATGCATGAAGACACTGAGGAGATCAA TGCATTGCTATATTCAGATGATGATTATGATGATGATTGCGAGAGTGATGATGAAGTAATGAGCACTGGTCACTCTCCTTATCCAAATGAAGGAGTTTGC AACAAAAGGGAATTAGAAGAAATCGATGGTCCTTGTAAAAGGCAGAAACTACTGGATAAGGTCAACAACATCAGCGACTTATCATCACTTGTGGGCACTG AGAGCTCCACACAACTCAATGGATCTTCCTTTCTTAAGGACAAAAAGCTCCCTGAATCAAAAACCATATCGACCAAAGAGGACACTGGTTCTGGTCTGAG CAACGAGCAGTCGAAGAAAGACAAGATCCGCGCAGCTCTGAAAATACTCGAGAGCGTAGTCCCTGGTGCAAAAGGAAACGAAGCGCTCTTACTTCTGGAC GAAGCAATTGATTACCTAAAGTTGCTGAAACGAGACTTAATCTCCACAGAGGTTAAGAACCAAAGCTCCACCACTCACAAGTCACCAATCTTGTTGCTTA AAGAGACAACATGGGGAACAAGAAATCTGCAGACAGATAAGGCG >RE_0295_translated MPLDKRQRDLPLGLSPQACFKDIVGRSVLPRIPLPELGKLYAAKLQARCLQPPPFQPLLCSHDKESYGKRFSRSDMRSWCAAATTTTTPLGALESSQKRL LIFDQSGDQTRLLQCPFPLRFPSHAAAEPVKLSELQGIEKAFKEDGEEFHKSDGTESEMHEDTEEINALLYSDDDYDDDCESDDEVMSTGHSPYPNEGVC NKRELEEIDGPCKRQKLLDKVNNISDLSSLVGTESSTQLNGSSFLKDKKLPESKTISTKEDTGSGLSNEQSKKDKIRAALKILESVVPGAKGNEALLLLD EAIDYLKLLKRDLISTEVKNQSSTTHKSPILLLKETTWGTRNLQTDKA
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1042/1044 (99.8%)（アミノ酸配列で346/348 (99.4%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT5G64 ATGCCTCTGGATAAGAGGCAACGGGATTTGCCTCTGGGCTTAAGTCCTCAAGCTTGCTTCAAGGATATAGTAGGTCGGTCTGTCCTTCCTAGAATTCCTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_029 ATGCCTCTGGATAAGAGGCAACGGGATTTGCCTCTGGGCTTAAGTCCTCAAGCTTGCTTCAAGGATATAGTAGGTCGGTCTGTCCTTCCTAGAATTCCTC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G64 TCCCTGAGCTTGGGAAACTATATGCAGCTAAGCTTCAGGCTCGCTGTTTGCAGCCACCACCATTCCAGTCTTTGCTGTGCAGTCATGATAAGGAGTCTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::: RE_029 TCCCTGAGCTTGGGAAACTATATGCAGCTAAGCTTCAGGCTCGCTGTTTGCAGCCACCACCATTCCAGCCTTTGCTGTGCAGTCATGATAAGGAGTCTTA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G64 TGGAAAAAGATTCTCACGGTCTGACATGCGGTCTTGGTGCGCTGCTGCTACTACTACTACTACTCCACTTGGAGCATTAGAGTCTTCTCAGAAAAGACTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_029 TGGAAAAAGATTCTCACGGTCTGACATGCGGTCTTGGTGCGCTGCTGCTACTACTACTACTACTCCACTTGGAGCATTAGAGTCTTCTCAGAAAAGACTT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT5G64 TTGATATTCGATCAGTCAGGAGACCAGACTCGTCTATTACAATGTCCATTTCCTCTACGGTTTCCATCTCATGCGGCTGCAGAACCAGTGAAACTCTCTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_029 TTGATATTCGATCAGTCAGGAGACCAGACTCGTCTATTACAATGTCCATTTCCTCTACGGTTTCCATCTCATGCGGCTGCAGAACCAGTGAAACTCTCTG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT5G64 AGTTACAAGGTATAGAGAAAGCTTTCAAAGAAGATGGTGAAGAGTTTCACAAGAGTGATGGAACAGAGTCAGAAATGCATGAAGACACTGAGGAGATCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_029 AGTTACAAGGTATAGAGAAAGCTTTCAAAGAAGATGGTGAAGAGTTTCACAAGAGTGATGGAACAGAGTCAGAAATGCATGAAGACACTGAGGAGATCAA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT5G64 TGCATTGCTATATTCAGATGATGATTATGATGATGATTGCGAGAGTGATGATGAAGTAATGAGCACTGGTCACTCTCCTTATCCAAATGAAGGAGTTTGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_029 TGCATTGCTATATTCAGATGATGATTATGATGATGATTGCGAGAGTGATGATGAAGTAATGAGCACTGGTCACTCTCCTTATCCAAATGAAGGAGTTTGC 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT5G64 AACAAAAGGGAATTAGAAGAAATCGATGGTCCTTGTAAAAGGCAGAAACTACTGGATAAGGTCAACAACATCAGCGACTTATCATCACTTGTGGGCACTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_029 AACAAAAGGGAATTAGAAGAAATCGATGGTCCTTGTAAAAGGCAGAAACTACTGGATAAGGTCAACAACATCAGCGACTTATCATCACTTGTGGGCACTG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT5G64 AGAGCTCCACACAACTCAATGGATCTTCCTTTCTTAAGGACAAAAAGCTCCCTGAATCAAAAACCATATCGACCAAAGAGGACACTGGTTCTGGTCTGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_029 AGAGCTCCACACAACTCAATGGATCTTCCTTTCTTAAGGACAAAAAGCTCCCTGAATCAAAAACCATATCGACCAAAGAGGACACTGGTTCTGGTCTGAG 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT5G64 CAACGAGCAGTCGAAGAAAGACAAGATCCGCACAGCTCTGAAAATACTCGAGAGCGTAGTCCCTGGTGCAAAAGGAAACGAAGCGCTCTTACTTCTGGAC ::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_029 CAACGAGCAGTCGAAGAAAGACAAGATCCGCGCAGCTCTGAAAATACTCGAGAGCGTAGTCCCTGGTGCAAAAGGAAACGAAGCGCTCTTACTTCTGGAC 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT5G64 GAAGCAATTGATTACCTAAAGTTGCTGAAACGAGACTTAATCTCCACAGAGGTTAAGAACCAAAGCTCCACCACTCACAAGTCACCAATCTTGTTGCTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_029 GAAGCAATTGATTACCTAAAGTTGCTGAAACGAGACTTAATCTCCACAGAGGTTAAGAACCAAAGCTCCACCACTCACAAGTCACCAATCTTGTTGCTTA 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 AT5G64 AAGAGACAACATGGGGAACAAGAAATCTGCAGACAGATAAGGCG :::::::::::::::::::::::::::::::::::::::::::: RE_029 AAGAGACAACATGGGGAACAAGAAATCTGCAGACAGATAAGGCG 1010 1020 1030 1040 10 20 30 40 50 60 70 80 90 100 AT5G64 MPLDKRQRDLPLGLSPQACFKDIVGRSVLPRIPLPELGKLYAAKLQARCLQPPPFQSLLCSHDKESYGKRFSRSDMRSWCAAATTTTTPLGALESSQKRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: RE_029 MPLDKRQRDLPLGLSPQACFKDIVGRSVLPRIPLPELGKLYAAKLQARCLQPPPFQPLLCSHDKESYGKRFSRSDMRSWCAAATTTTTPLGALESSQKRL 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G64 LIFDQSGDQTRLLQCPFPLRFPSHAAAEPVKLSELQGIEKAFKEDGEEFHKSDGTESEMHEDTEEINALLYSDDDYDDDCESDDEVMSTGHSPYPNEGVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_029 LIFDQSGDQTRLLQCPFPLRFPSHAAAEPVKLSELQGIEKAFKEDGEEFHKSDGTESEMHEDTEEINALLYSDDDYDDDCESDDEVMSTGHSPYPNEGVC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G64 NKRELEEIDGPCKRQKLLDKVNNISDLSSLVGTESSTQLNGSSFLKDKKLPESKTISTKEDTGSGLSNEQSKKDKIRTALKILESVVPGAKGNEALLLLD ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::: RE_029 NKRELEEIDGPCKRQKLLDKVNNISDLSSLVGTESSTQLNGSSFLKDKKLPESKTISTKEDTGSGLSNEQSKKDKIRAALKILESVVPGAKGNEALLLLD 210 220 230 240 250 260 270 280 290 300 310 320 330 340 AT5G64 EAIDYLKLLKRDLISTEVKNQSSTTHKSPILLLKETTWGTRNLQTDKA :::::::::::::::::::::::::::::::::::::::::::::::: RE_029 EAIDYLKLLKRDLISTEVKNQSSTTHKSPILLLKETTWGTRNLQTDKA 310 320 330 340

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