◆◆◆RE_02D04 detail◆◆◆

Code name	RE_02D04
Locus	AT3G02380
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment
sequence	>RE_02D04_1041bp ATGTTGAAAGAAGAGAGTAATGAGAGTGGTACTTGGGCACGAGCATGTGACACTTGTCGTTCAGCCGCCTGCACTGTCTACTGTGAAGCCGACTCTGCCT ACTTGTGCACCACCTGTGATGCTCGAGTTCACGCAGCCAACCGTGTTGCTTCTCGCCATGAACGTGTTCGTGTCTGTCAGTCATGTGAGTCTGCCCCAGC TGCGTTTTTGTGTAAAGCAGACGCTGCGTCTCTTTGCACAGCTTGTGATGCAGAGATTCATTCCGCAAACCCACTAGCTAGACGTCATCAGCGAGTTCCG ATTCTTCCATTATCTGCAAACTCTTGCAGCTCCATGGCCCCAAGTGAGACTGATGCTGATAACGATGAGGATGATCGAGAGGTTGCTTCGTGGTTACTCC CTAATCCAGGGAAAAACATCGGTAATCAGAATAATGGGTTCTTGTTTGGTGTTGAGTACCTTGATCTTGTGGATTACAGCTCCAGCATGGACAACCAATT CGAAGATAATCAGTACACTCACTACCAGAGGAGCTTTGGAGGAGATGGAGTTGTGCCGCTTCAAGTTGAAGAATCAACAAGTCACCTGCAACAAAGCCAA CAAAACTTTCAGTTGGGTATCAACTATGGATTCTCCTCAGGAGCTCACTACAACAACAACTCCTTAAAGGACCTAAACCATAGCGCATCCGTTTCATCAA TGGACATCAGTGTTGTGCCAGAGTCAACTGCAAGTGACATAACAGTCCAACACCCAAGAACTACTAAAGAGACGATAGACCAACTATCTGGTCCTCCTAC TCAGGTGGTGCAACAGCTTACTCCAATGGAGAGGGAGGCTAGGGTCCTGAGATACAGAGAGAAGAAGAAGACAAGGAAATTTGACAAGACAATAAGATAT GCTTCAAGAAAGGCATATGCAGAGATAAGACCACGGATCAAGGGCAGATTCGCAAAGAGGATAGAAACTGAAGCTGAGGCTGAAGAAATCTTCTCAACAT CGCTAATGTCTGAGACTGGATATGGAATTGTCCCTTCCTTC >RE_02D04_translated MLKEESNESGTWARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVP ILPLSANSCSSMAPSETDADNDEDDREVASWLLPNPGKNIGNQNNGFLFGVEYLDLVDYSSSMDNQFEDNQYTHYQRSFGGDGVVPLQVEESTSHLQQSQ QNFQLGINYGFSSGAHYNNNSLKDLNHSASVSSMDISVVPESTASDITVQHPRTTKETIDQLSGPPTQVVQQLTPMEREARVLRYREKKKTRKFDKTIRY ASRKAYAEIRPRIKGRFAKRIETEAEAEEIFSTSLMSETGYGIVPSF
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1040/1041 (99.9%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT3G02 ATGTTGAAAGAAGAGAGTAATGAGAGTGGTACTTGGGCACGAGCATGTGACACTTGTCGTTCAGCCGCCTGCACTGTCTACTGTGAAGCCGACTCTGCCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02D ATGTTGAAAGAAGAGAGTAATGAGAGTGGTACTTGGGCACGAGCATGTGACACTTGTCGTTCAGCCGCCTGCACTGTCTACTGTGAAGCCGACTCTGCCT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G02 ACTTGTGCACCACCTGTGATGCTCGAGTTCACGCAGCCAACCGTGTTGCTTCTCGCCATGAACGTGTTCGTGTCTGTCAGTCATGTGAGTCTGCCCCAGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02D ACTTGTGCACCACCTGTGATGCTCGAGTTCACGCAGCCAACCGTGTTGCTTCTCGCCATGAACGTGTTCGTGTCTGTCAGTCATGTGAGTCTGCCCCAGC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G02 TGCGTTTTTGTGTAAAGCAGACGCTGCGTCTCTTTGTACAGCTTGTGATGCAGAGATTCATTCCGCAAACCCACTAGCTAGACGTCATCAGCGAGTTCCG :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02D TGCGTTTTTGTGTAAAGCAGACGCTGCGTCTCTTTGCACAGCTTGTGATGCAGAGATTCATTCCGCAAACCCACTAGCTAGACGTCATCAGCGAGTTCCG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT3G02 ATTCTTCCATTATCTGCAAACTCTTGCAGCTCCATGGCCCCAAGTGAGACTGATGCTGATAACGATGAGGATGATCGAGAGGTTGCTTCGTGGTTACTCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02D ATTCTTCCATTATCTGCAAACTCTTGCAGCTCCATGGCCCCAAGTGAGACTGATGCTGATAACGATGAGGATGATCGAGAGGTTGCTTCGTGGTTACTCC 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT3G02 CTAATCCAGGGAAAAACATCGGTAATCAGAATAATGGGTTCTTGTTTGGTGTTGAGTACCTTGATCTTGTGGATTACAGCTCCAGCATGGACAACCAATT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02D CTAATCCAGGGAAAAACATCGGTAATCAGAATAATGGGTTCTTGTTTGGTGTTGAGTACCTTGATCTTGTGGATTACAGCTCCAGCATGGACAACCAATT 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT3G02 CGAAGATAATCAGTACACTCACTACCAGAGGAGCTTTGGAGGAGATGGAGTTGTGCCGCTTCAAGTTGAAGAATCAACAAGTCACCTGCAACAAAGCCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02D CGAAGATAATCAGTACACTCACTACCAGAGGAGCTTTGGAGGAGATGGAGTTGTGCCGCTTCAAGTTGAAGAATCAACAAGTCACCTGCAACAAAGCCAA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT3G02 CAAAACTTTCAGTTGGGTATCAACTATGGATTCTCCTCAGGAGCTCACTACAACAACAACTCCTTAAAGGACCTAAACCATAGCGCATCCGTTTCATCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02D CAAAACTTTCAGTTGGGTATCAACTATGGATTCTCCTCAGGAGCTCACTACAACAACAACTCCTTAAAGGACCTAAACCATAGCGCATCCGTTTCATCAA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT3G02 TGGACATCAGTGTTGTGCCAGAGTCAACTGCAAGTGACATAACAGTCCAACACCCAAGAACTACTAAAGAGACGATAGACCAACTATCTGGTCCTCCTAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02D TGGACATCAGTGTTGTGCCAGAGTCAACTGCAAGTGACATAACAGTCCAACACCCAAGAACTACTAAAGAGACGATAGACCAACTATCTGGTCCTCCTAC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT3G02 TCAGGTGGTGCAACAGCTTACTCCAATGGAGAGGGAGGCTAGGGTCCTGAGATACAGAGAGAAGAAGAAGACAAGGAAATTTGACAAGACAATAAGATAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02D TCAGGTGGTGCAACAGCTTACTCCAATGGAGAGGGAGGCTAGGGTCCTGAGATACAGAGAGAAGAAGAAGACAAGGAAATTTGACAAGACAATAAGATAT 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT3G02 GCTTCAAGAAAGGCATATGCAGAGATAAGACCACGGATCAAGGGCAGATTCGCAAAGAGGATAGAAACTGAAGCTGAGGCTGAAGAAATCTTCTCAACAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02D GCTTCAAGAAAGGCATATGCAGAGATAAGACCACGGATCAAGGGCAGATTCGCAAAGAGGATAGAAACTGAAGCTGAGGCTGAAGAAATCTTCTCAACAT 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 AT3G02 CGCTAATGTCTGAGACTGGATATGGAATTGTCCCTTCCTTC ::::::::::::::::::::::::::::::::::::::::: RE_02D CGCTAATGTCTGAGACTGGATATGGAATTGTCCCTTCCTTC 1010 1020 1030 1040 10 20 30 40 50 60 70 80 90 100 AT3G02 MLKEESNESGTWARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02D MLKEESNESGTWARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVP 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G02 ILPLSANSCSSMAPSETDADNDEDDREVASWLLPNPGKNIGNQNNGFLFGVEYLDLVDYSSSMDNQFEDNQYTHYQRSFGGDGVVPLQVEESTSHLQQSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02D ILPLSANSCSSMAPSETDADNDEDDREVASWLLPNPGKNIGNQNNGFLFGVEYLDLVDYSSSMDNQFEDNQYTHYQRSFGGDGVVPLQVEESTSHLQQSQ 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G02 QNFQLGINYGFSSGAHYNNNSLKDLNHSASVSSMDISVVPESTASDITVQHPRTTKETIDQLSGPPTQVVQQLTPMEREARVLRYREKKKTRKFDKTIRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02D QNFQLGINYGFSSGAHYNNNSLKDLNHSASVSSMDISVVPESTASDITVQHPRTTKETIDQLSGPPTQVVQQLTPMEREARVLRYREKKKTRKFDKTIRY 210 220 230 240 250 260 270 280 290 300 310 320 330 340 AT3G02 ASRKAYAEIRPRIKGRFAKRIETEAEAEEIFSTSLMSETGYGIVPSF ::::::::::::::::::::::::::::::::::::::::::::::: RE_02D ASRKAYAEIRPRIKGRFAKRIETEAEAEEIFSTSLMSETGYGIVPSF 310 320 330 340

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