| Code name | RE_02D05 | |||
|---|---|---|---|---|
| Locus | AT3G21150 | |||
| Forward primer | ||||
| Reverse primer | ||||
| Alignment with TAIR7CDS | アミノ酸配列100%一致 | |||
| comment | ||||
| sequence |
>RE_02D05_675bp ATGGTGAGCTTTTGCGAGCTTTGTGGTGCCGAAGCTGATCTCCATTGTGCCGCGGACTCTGCCTTCCTCTGCCGTTCTTGTGACGCTAAGTTCCATGCCT CAAATTTTCTCTTCGCTCGTCATTTCCGGCGTGTCATCTGCCCAAATTGCAAATCTCTTACTCAAAATTTCGTTTCCGGTCCTCTTCTTCCTTGGCCTCC ACGAACAACATGTTGTTCAGAATCGTCGTCTTCTTCTTGCTGCTCGTCTCTTGACTGTGTCTCAAGCTCCGAGCTATCGTCAACGACGCGTGACGTAAAC AGAGCGCGAGGGAGGGAAAACAGAGTGAATGCCAAGGCCGTTGCGGTTACGGTGGCGGATGGCATTTTTGTAAATTGGTGTGGTAAGTTAGGACTAAACA GGGATTTAACAAACGCTGTCGTTTCATATGCGTCTTTGGCTTTGGCTGTGGAGACGAGGCCAAGAGCGACGAAGAGAGTGTTCTTAGCGGCGGCGTTTTG GTTCGGCGTTAAGAACACGACGACGTGGCAGAATTTAAAGAAAGTAGAAGATGTGACTGGAGTTTCAGCTGGGATGATTCGAGCGGTTGAAAGCAAATTG GCGCGTGCAATGACGCAGCAGCTTAGACGGTGGCGCGTGGATTCGGAGGAAGGATGGGCTGAAAACGACAACGTT >RE_02D05_translated MVSFCELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSGPLLPWPPRTTCCSESSSSSCCSSLDCVSSSELSSTTRDVN RARGRENRVNAKAVAVTVADGIFVNWCGKLGLNRDLTNAVVSYASLALAVETRPRATKRVFLAAAFWFGVKNTTTWQNLKKVEDVTGVSAGMIRAVESKL ARAMTQQLRRWRVDSEEGWAENDNV |
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| Alignment |
◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 674/675 (99.9%)（アミノ酸配列で100%）一致しました。
10 20 30 40 50 60 70 80 90 100
AT3G21 ATGGTGAGCTTTTGCGAGCTTTGTGGTGCCGAAGCTGATCTCCATTGTGCCGCGGACTCTGCCTTCCTCTGCCGTTCTTGTGACGCTAAGTTCCATGCCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02D ATGGTGAGCTTTTGCGAGCTTTGTGGTGCCGAAGCTGATCTCCATTGTGCCGCGGACTCTGCCTTCCTCTGCCGTTCTTGTGACGCTAAGTTCCATGCCT
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT3G21 CAAATTTTCTCTTCGCTCGTCATTTCCGGCGTGTCATCTGCCCAAATTGCAAATCTCTTACTCAAAATTTCGTTTCTGGTCCTCTTCTTCCTTGGCCTCC
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
RE_02D CAAATTTTCTCTTCGCTCGTCATTTCCGGCGTGTCATCTGCCCAAATTGCAAATCTCTTACTCAAAATTTCGTTTCCGGTCCTCTTCTTCCTTGGCCTCC
110 120 130 140 150 160 170 180 190 200
210 220 230 240 250 260 270 280 290 300
AT3G21 ACGAACAACATGTTGTTCAGAATCGTCGTCTTCTTCTTGCTGCTCGTCTCTTGACTGTGTCTCAAGCTCCGAGCTATCGTCAACGACGCGTGACGTAAAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02D ACGAACAACATGTTGTTCAGAATCGTCGTCTTCTTCTTGCTGCTCGTCTCTTGACTGTGTCTCAAGCTCCGAGCTATCGTCAACGACGCGTGACGTAAAC
210 220 230 240 250 260 270 280 290 300
310 320 330 340 350 360 370 380 390 400
AT3G21 AGAGCGCGAGGGAGGGAAAACAGAGTGAATGCCAAGGCCGTTGCGGTTACGGTGGCGGATGGCATTTTTGTAAATTGGTGTGGTAAGTTAGGACTAAACA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02D AGAGCGCGAGGGAGGGAAAACAGAGTGAATGCCAAGGCCGTTGCGGTTACGGTGGCGGATGGCATTTTTGTAAATTGGTGTGGTAAGTTAGGACTAAACA
310 320 330 340 350 360 370 380 390 400
410 420 430 440 450 460 470 480 490 500
AT3G21 GGGATTTAACAAACGCTGTCGTTTCATATGCGTCTTTGGCTTTGGCTGTGGAGACGAGGCCAAGAGCGACGAAGAGAGTGTTCTTAGCGGCGGCGTTTTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02D GGGATTTAACAAACGCTGTCGTTTCATATGCGTCTTTGGCTTTGGCTGTGGAGACGAGGCCAAGAGCGACGAAGAGAGTGTTCTTAGCGGCGGCGTTTTG
410 420 430 440 450 460 470 480 490 500
510 520 530 540 550 560 570 580 590 600
AT3G21 GTTCGGCGTTAAGAACACGACGACGTGGCAGAATTTAAAGAAAGTAGAAGATGTGACTGGAGTTTCAGCTGGGATGATTCGAGCGGTTGAAAGCAAATTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02D GTTCGGCGTTAAGAACACGACGACGTGGCAGAATTTAAAGAAAGTAGAAGATGTGACTGGAGTTTCAGCTGGGATGATTCGAGCGGTTGAAAGCAAATTG
510 520 530 540 550 560 570 580 590 600
610 620 630 640 650 660 670
AT3G21 GCGCGTGCAATGACGCAGCAGCTTAGACGGTGGCGCGTGGATTCGGAGGAAGGATGGGCTGAAAACGACAACGTT
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02D GCGCGTGCAATGACGCAGCAGCTTAGACGGTGGCGCGTGGATTCGGAGGAAGGATGGGCTGAAAACGACAACGTT
610 620 630 640 650 660 670
10 20 30 40 50 60 70 80 90 100
AT3G21 MVSFCELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSGPLLPWPPRTTCCSESSSSSCCSSLDCVSSSELSSTTRDVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02D MVSFCELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSGPLLPWPPRTTCCSESSSSSCCSSLDCVSSSELSSTTRDVN
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT3G21 RARGRENRVNAKAVAVTVADGIFVNWCGKLGLNRDLTNAVVSYASLALAVETRPRATKRVFLAAAFWFGVKNTTTWQNLKKVEDVTGVSAGMIRAVESKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02D RARGRENRVNAKAVAVTVADGIFVNWCGKLGLNRDLTNAVVSYASLALAVETRPRATKRVFLAAAFWFGVKNTTTWQNLKKVEDVTGVSAGMIRAVESKL
110 120 130 140 150 160 170 180 190 200
210 220
AT3G21 ARAMTQQLRRWRVDSEEGWAENDNV
:::::::::::::::::::::::::
RE_02D ARAMTQQLRRWRVDSEEGWAENDNV
210 220
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