| Code name | RE_02D11 | |||
|---|---|---|---|---|
| Locus | AT1G26310 | |||
| Forward primer | ||||
| Reverse primer | ||||
| Alignment with TAIR7CDS | アミノ酸配列100%一致 | |||
| comment | ||||
| sequence |
>RE_02D11_765bp ATGGGAAGGGGTAGGGTTGAATTGAAGAGGATAGAGAACAAGATCAATAGACAAGTGACATTCTCGAAAAGAAGAACTGGTCTTTTGAAGAAAGCTCAGG AGATCTCTGTTCTTTGTGATGCCGAGGTTTCCCTTATTGTCTTCTCCCATAAGGGTAAATTGTTCGAGTACTCCTCTGAATCTTGCATGGAGAAGGTACT AGAACGCTACGAGAGGTATTCTTACGCCGAGAGACAGCTGATTGCACCTGACTCTCACGTTAATGCACAGACGAACTGGTCAATGGAGTATAGCAGGCTT AAGGCCAAGATTGAGCTTTTGGAGAGAAACCAAAGGCATTATCTGGGAGAAGAGTTGGAACCAATGAGCCTCAAGGATCTCCAAAATCTGGAGCAGCAGC TTGAGACTGCTCTTAAGCACATTCGCTCCAGAAAAAATCAACTCATGAATGAGTCCCTCAACCACCTCCAAAGAAAGGAGAAGGAGATACAGGAGGAAAA CAGCATGCTTACCAAACAGATAAAGGAGAGGGAAAACATCCTAAGGACAAAACAAACCCAATGTGAGCAGCTGAACCGCAGCGTCGACGATGTACCACAG CCACAACCATTTCAACACCCCCATCTTTACATGATCGCTCATCAGACTTCTCCTTTCCTAAATATGGGTGGTTTGTACCAAGAAGAAGACCAAACGGCGA TGAGGAGGAACAATCTGGATCTGACTCTTGAACCCATTTACAATTACCTTGGCTGTTACGCCGCT >RE_02D11_translated MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRL KAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENILRTKQTQCEQLNRSVDDVPQ PQPFQHPHLYMIAHQTSPFLNMGGLYQEEDQTAMRRNNLDLTLEPIYNYLGCYAA |
|||
| Alignment |
◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 764/765 (99.9%)（アミノ酸配列で100%）一致しました。
10 20 30 40 50 60 70 80 90 100
AT1G26 ATGGGAAGGGGTAGGGTTGAATTGAAGAGGATAGAGAACAAGATCAATAGACAAGTGACATTCTCGAAAAGAAGAACTGGTCTTTTGAAGAAAGCTCAGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02D ATGGGAAGGGGTAGGGTTGAATTGAAGAGGATAGAGAACAAGATCAATAGACAAGTGACATTCTCGAAAAGAAGAACTGGTCTTTTGAAGAAAGCTCAGG
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT1G26 AGATCTCTGTTCTTTGTGATGCCGAGGTTTCCCTTATTGTCTTCTCCCATAAGGGCAAATTGTTCGAGTACTCCTCTGAATCTTGCATGGAGAAGGTACT
::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::
RE_02D AGATCTCTGTTCTTTGTGATGCCGAGGTTTCCCTTATTGTCTTCTCCCATAAGGGTAAATTGTTCGAGTACTCCTCTGAATCTTGCATGGAGAAGGTACT
110 120 130 140 150 160 170 180 190 200
210 220 230 240 250 260 270 280 290 300
AT1G26 AGAACGCTACGAGAGGTATTCTTACGCCGAGAGACAGCTGATTGCACCTGACTCTCACGTTAATGCACAGACGAACTGGTCAATGGAGTATAGCAGGCTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02D AGAACGCTACGAGAGGTATTCTTACGCCGAGAGACAGCTGATTGCACCTGACTCTCACGTTAATGCACAGACGAACTGGTCAATGGAGTATAGCAGGCTT
210 220 230 240 250 260 270 280 290 300
310 320 330 340 350 360 370 380 390 400
AT1G26 AAGGCCAAGATTGAGCTTTTGGAGAGAAACCAAAGGCATTATCTGGGAGAAGAGTTGGAACCAATGAGCCTCAAGGATCTCCAAAATCTGGAGCAGCAGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02D AAGGCCAAGATTGAGCTTTTGGAGAGAAACCAAAGGCATTATCTGGGAGAAGAGTTGGAACCAATGAGCCTCAAGGATCTCCAAAATCTGGAGCAGCAGC
310 320 330 340 350 360 370 380 390 400
410 420 430 440 450 460 470 480 490 500
AT1G26 TTGAGACTGCTCTTAAGCACATTCGCTCCAGAAAAAATCAACTCATGAATGAGTCCCTCAACCACCTCCAAAGAAAGGAGAAGGAGATACAGGAGGAAAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02D TTGAGACTGCTCTTAAGCACATTCGCTCCAGAAAAAATCAACTCATGAATGAGTCCCTCAACCACCTCCAAAGAAAGGAGAAGGAGATACAGGAGGAAAA
410 420 430 440 450 460 470 480 490 500
510 520 530 540 550 560 570 580 590 600
AT1G26 CAGCATGCTTACCAAACAGATAAAGGAGAGGGAAAACATCCTAAGGACAAAACAAACCCAATGTGAGCAGCTGAACCGCAGCGTCGACGATGTACCACAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02D CAGCATGCTTACCAAACAGATAAAGGAGAGGGAAAACATCCTAAGGACAAAACAAACCCAATGTGAGCAGCTGAACCGCAGCGTCGACGATGTACCACAG
510 520 530 540 550 560 570 580 590 600
610 620 630 640 650 660 670 680 690 700
AT1G26 CCACAACCATTTCAACACCCCCATCTTTACATGATCGCTCATCAGACTTCTCCTTTCCTAAATATGGGTGGTTTGTACCAAGAAGAAGACCAAACGGCGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02D CCACAACCATTTCAACACCCCCATCTTTACATGATCGCTCATCAGACTTCTCCTTTCCTAAATATGGGTGGTTTGTACCAAGAAGAAGACCAAACGGCGA
610 620 630 640 650 660 670 680 690 700
710 720 730 740 750 760
AT1G26 TGAGGAGGAACAATCTGGATCTGACTCTTGAACCCATTTACAATTACCTTGGCTGTTACGCCGCT
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02D TGAGGAGGAACAATCTGGATCTGACTCTTGAACCCATTTACAATTACCTTGGCTGTTACGCCGCT
710 720 730 740 750 760
10 20 30 40 50 60 70 80 90 100
AT1G26 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02D MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRL
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT1G26 KAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENILRTKQTQCEQLNRSVDDVPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02D KAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENILRTKQTQCEQLNRSVDDVPQ
110 120 130 140 150 160 170 180 190 200
210 220 230 240 250
AT1G26 PQPFQHPHLYMIAHQTSPFLNMGGLYQEEDQTAMRRNNLDLTLEPIYNYLGCYAA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02D PQPFQHPHLYMIAHQTSPFLNMGGLYQEEDQTAMRRNNLDLTLEPIYNYLGCYAA
210 220 230 240 250
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