◆◆◆RE_02G12 detail◆◆◆

Code name	RE_02G12
Locus	AT4G01680
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment
sequence	>RE_02G12_1044bp ATGGGAAGACATTCATGTTGTTACAAACAGAAACTGAGGAAAGGACTTTGGTCTCCTGAAGAAGATGAGAAGCTTCTTCGTTACATCACTAAGTATGGTC ATGGTTGCTGGAGCTCTGTCCCTAAACAAGCTGGTACGTTTTTATTTATCCAAATTCATCTTTTGTTTGGTTTACAGAGATGTGGAAAAAGTTGTAGATT AAGATGGATAAATTATTTAAGACCAGATTTGAAGAGAGGAGCATTTTCTCAAGATGAAGAAAATCTCATTATTGAACTTCATGCCGTTCTTGGCAATAGA TGGTCTCAGATAGCTGCACAGCTTCCTGGAAGAACCGACAATGAAATCAAGAATCTTTGGAATTCTTGTTTGAAGAAGAAATTGAGGCTGAGAGGAATTG ACCCGGTTACACACAAGCTCTTAACCGAAATCGAAACCGGTACAGATGACAAAACAAAACCGGTTGAGAAGAGTCAACAGACCTACCTCGTTGAGACTGA TGGCTCCTCTAGTACCACTACTTGTAGTACTAACCAAAACAACAACACTGATCATCTTTATACCGGAAATTTCGGTTTTCAACGGTTAAGTCTAGAAAAC GGTTCAAGAATCGCAGCCGGTTCTGACCTCGGTATCTGGATTCCCCAAACCGGAAGAAACCATCATCATCATGTCGATGAAACCATCCCTAGTGCAGTGG TACTACCCGGTTCAATGTTCTCATCCGGTTTAACCGGTTATAGATCCTCCAATCTCGGTTTAATTGAATTGGAAAACTCATTCTCAACCGGGCCAATGAT GACAGAGCATCAGCAAATTCAAGAGAGTAACTACAACAATTCAACATTCTTTGGAAATGGGAATCTGAATTGGGGATTAACAATGGAGGAAAATCAAAAT CCATTCACAATATCGAATCATTCAAATTCGTCCTTATACAGTGATATAAAATCAGAGACCAATTTTTTTGGCACAGAGGCTACAAATGTTGGTATGTGGC CATGTAACCAGCTCCAGCCTCAGCAACATGCATATGGCCATATA >RE_02G12_translated MGRHSCCYKQKLRKGLWSPEEDEKLLRYITKYGHGCWSSVPKQAGTFLFIQIHLLFGLQRCGKSCRLRWINYLRPDLKRGAFSQDEENLIIELHAVLGNR WSQIAAQLPGRTDNEIKNLWNSCLKKKLRLRGIDPVTHKLLTEIETGTDDKTKPVEKSQQTYLVETDGSSSTTTCSTNQNNNTDHLYTGNFGFQRLSLEN GSRIAAGSDLGIWIPQTGRNHHHHVDETIPSAVVLPGSMFSSGLTGYRSSNLGLIELENSFSTGPMMTEHQQIQESNYNNSTFFGNGNLNWGLTMEENQN PFTISNHSNSSLYSDIKSETNFFGTEATNVGMWPCNQLQPQQHAYGHI
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1008/1044 (96.6%)（アミノ酸配列で336/348 (96.6%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT4G01 ATGGGAAGACATTCATGTTGTTACAAACAGAAACTGAGGAAAGGACTTTGGTCTCCTGAAGAAGATGAGAAGCTTCTTCGTTACATCACTAAGTATGGTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02G ATGGGAAGACATTCATGTTGTTACAAACAGAAACTGAGGAAAGGACTTTGGTCTCCTGAAGAAGATGAGAAGCTTCTTCGTTACATCACTAAGTATGGTC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 AT4G01 ATGGTTGCTGGAGCTCTGTCCCTAAACAAGC------------------------------------TGGTTTACAGAGATGTGGAAAAAGTTGTAGATT ::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::: RE_02G ATGGTTGCTGGAGCTCTGTCCCTAAACAAGCTGGTACGTTTTTATTTATCCAAATTCATCTTTTGTTTGGTTTACAGAGATGTGGAAAAAGTTGTAGATT 110 120 130 140 150 160 170 180 190 200 170 180 190 200 210 220 230 240 250 260 AT4G01 AAGATGGATAAATTATTTAAGACCAGATTTGAAGAGAGGAGCATTTTCTCAAGATGAAGAAAATCTCATTATTGAACTTCATGCCGTTCTTGGCAATAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02G AAGATGGATAAATTATTTAAGACCAGATTTGAAGAGAGGAGCATTTTCTCAAGATGAAGAAAATCTCATTATTGAACTTCATGCCGTTCTTGGCAATAGA 210 220 230 240 250 260 270 280 290 300 270 280 290 300 310 320 330 340 350 360 AT4G01 TGGTCTCAGATAGCTGCACAGCTTCCTGGAAGAACCGACAATGAAATCAAGAATCTTTGGAATTCTTGTTTGAAGAAGAAATTGAGGCTGAGAGGAATTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02G TGGTCTCAGATAGCTGCACAGCTTCCTGGAAGAACCGACAATGAAATCAAGAATCTTTGGAATTCTTGTTTGAAGAAGAAATTGAGGCTGAGAGGAATTG 310 320 330 340 350 360 370 380 390 400 370 380 390 400 410 420 430 440 450 460 AT4G01 ACCCGGTTACACACAAGCTCTTAACCGAAATCGAAACCGGTACAGATGACAAAACAAAACCGGTTGAGAAGAGTCAACAGACCTACCTCGTTGAGACTGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02G ACCCGGTTACACACAAGCTCTTAACCGAAATCGAAACCGGTACAGATGACAAAACAAAACCGGTTGAGAAGAGTCAACAGACCTACCTCGTTGAGACTGA 410 420 430 440 450 460 470 480 490 500 470 480 490 500 510 520 530 540 550 560 AT4G01 TGGCTCCTCTAGTACCACTACTTGTAGTACTAACCAAAACAACAACACTGATCATCTTTATACCGGAAATTTCGGTTTTCAACGGTTAAGTCTAGAAAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02G TGGCTCCTCTAGTACCACTACTTGTAGTACTAACCAAAACAACAACACTGATCATCTTTATACCGGAAATTTCGGTTTTCAACGGTTAAGTCTAGAAAAC 510 520 530 540 550 560 570 580 590 600 570 580 590 600 610 620 630 640 650 660 AT4G01 GGTTCAAGAATCGCAGCCGGTTCTGACCTCGGTATCTGGATTCCCCAAACCGGAAGAAACCATCATCATCATGTCGATGAAACCATCCCTAGTGCAGTGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02G GGTTCAAGAATCGCAGCCGGTTCTGACCTCGGTATCTGGATTCCCCAAACCGGAAGAAACCATCATCATCATGTCGATGAAACCATCCCTAGTGCAGTGG 610 620 630 640 650 660 670 680 690 700 670 680 690 700 710 720 730 740 750 760 AT4G01 TACTACCCGGTTCAATGTTCTCATCCGGTTTAACCGGTTATAGATCCTCCAATCTCGGTTTAATTGAATTGGAAAACTCATTCTCAACCGGGCCAATGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02G TACTACCCGGTTCAATGTTCTCATCCGGTTTAACCGGTTATAGATCCTCCAATCTCGGTTTAATTGAATTGGAAAACTCATTCTCAACCGGGCCAATGAT 710 720 730 740 750 760 770 780 790 800 770 780 790 800 810 820 830 840 850 860 AT4G01 GACAGAGCATCAGCAAATTCAAGAGAGTAACTACAACAATTCAACATTCTTTGGAAATGGGAATCTGAATTGGGGATTAACAATGGAGGAAAATCAAAAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02G GACAGAGCATCAGCAAATTCAAGAGAGTAACTACAACAATTCAACATTCTTTGGAAATGGGAATCTGAATTGGGGATTAACAATGGAGGAAAATCAAAAT 810 820 830 840 850 860 870 880 890 900 870 880 890 900 910 920 930 940 950 960 AT4G01 CCATTCACAATATCGAATCATTCAAATTCGTCCTTATACAGTGATATAAAATCAGAGACCAATTTTTTTGGCACAGAGGCTACAAATGTTGGTATGTGGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02G CCATTCACAATATCGAATCATTCAAATTCGTCCTTATACAGTGATATAAAATCAGAGACCAATTTTTTTGGCACAGAGGCTACAAATGTTGGTATGTGGC 910 920 930 940 950 960 970 980 990 1000 970 980 990 1000 AT4G01 CATGTAACCAGCTCCAGCCTCAGCAACATGCATATGGCCATATA :::::::::::::::::::::::::::::::::::::::::::: RE_02G CATGTAACCAGCTCCAGCCTCAGCAACATGCATATGGCCATATA 1010 1020 1030 1040 10 20 30 40 50 60 70 80 AT4G01 MGRHSCCYKQKLRKGLWSPEEDEKLLRYITKYGHGCWSSVPKQA------------GLQRCGKSCRLRWINYLRPDLKRGAFSQDEENLIIELHAVLGNR :::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: RE_02G MGRHSCCYKQKLRKGLWSPEEDEKLLRYITKYGHGCWSSVPKQAGTFLFIQIHLLFGLQRCGKSCRLRWINYLRPDLKRGAFSQDEENLIIELHAVLGNR 10 20 30 40 50 60 70 80 90 100 90 100 110 120 130 140 150 160 170 180 AT4G01 WSQIAAQLPGRTDNEIKNLWNSCLKKKLRLRGIDPVTHKLLTEIETGTDDKTKPVEKSQQTYLVETDGSSSTTTCSTNQNNNTDHLYTGNFGFQRLSLEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02G WSQIAAQLPGRTDNEIKNLWNSCLKKKLRLRGIDPVTHKLLTEIETGTDDKTKPVEKSQQTYLVETDGSSSTTTCSTNQNNNTDHLYTGNFGFQRLSLEN 110 120 130 140 150 160 170 180 190 200 190 200 210 220 230 240 250 260 270 280 AT4G01 GSRIAAGSDLGIWIPQTGRNHHHHVDETIPSAVVLPGSMFSSGLTGYRSSNLGLIELENSFSTGPMMTEHQQIQESNYNNSTFFGNGNLNWGLTMEENQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02G GSRIAAGSDLGIWIPQTGRNHHHHVDETIPSAVVLPGSMFSSGLTGYRSSNLGLIELENSFSTGPMMTEHQQIQESNYNNSTFFGNGNLNWGLTMEENQN 210 220 230 240 250 260 270 280 290 300 290 300 310 320 330 AT4G01 PFTISNHSNSSLYSDIKSETNFFGTEATNVGMWPCNQLQPQQHAYGHI :::::::::::::::::::::::::::::::::::::::::::::::: RE_02G PFTISNHSNSSLYSDIKSETNFFGTEATNVGMWPCNQLQPQQHAYGHI 310 320 330 340

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