| Code name | RE_02H03 | |||
|---|---|---|---|---|
| Locus | AT4G34990 | |||
| Forward primer | ||||
| Reverse primer | ||||
| Alignment with TAIR7CDS | アミノ酸配列100%一致 | |||
| comment | ||||
| sequence |
>RE_02H03_822bp ATGGGAAGGTCTCCTTGCTGTGAGAAAGACCACACAAACAAAGGAGCTTGGACTAAGGAAGAAGACGATAAGCTCATCTCTTACATCAAAGCTCACGGTG AAGGTTGTTGGCGTTCTCTTCCTAGATCCGCCGGTCTTCAACGTTGCGGAAAAAGCTGTCGTCTCCGATGGATTAACTATCTCCGACCTGATCTCAAGAG GGGTAACTTCACCCTCGAAGAAGATGATCTCATCATCAAACTACATAGCCTTCTCGGTAACAAGTGGTCTCTTATTGCGACGAGATTACCAGGAAGAACA GATAACGAGATTAAGAATTACTGGAACACACATGTTAAGAGGAAGCTATTAAGAAAAGGGATTGATCCGGCGACTCATCGACCTATCAACGAGACCAAAA CTTCTCAAGATTCGTCTGATTCTAGTAAAACAGAGGACCCTCTTGTCAAGATTCTCTCTTTTGGTCCTCAGCTGGAGAAAATAGCAAATTTCGGGGACGA GAGAATTCAAAAGAGAGTTGAGTACTCAGTTGTTGAAGAAAGATGTCTGGACTTGAATCTTGAGCTTAGGATCAGTCCACCATGGCAAGACAAGCTCCAT GATGAGAGGAACCTAAGGTTTGGGAGAGTGAAGTATAGGTGCAGTGCGTGCCGTTTTGGATTCGGGAACGGCAAGGAGTGTAGCTGTAATAATGTGAAAT GTCAAACAGAGGACAGTAGTAGCAGCAGCTATTCTTCAACCGACATTAGTAGTAGCATTGGTTATGACTTCTTGGGTCTAAACAACACTAGGGTTTTGGA TTTTAGCACTTTGGAAATGAAA >RE_02H03_translated MGRSPCCEKDHTNKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINYLRPDLKRGNFTLEEDDLIIKLHSLLGNKWSLIATRLPGRT DNEIKNYWNTHVKRKLLRKGIDPATHRPINETKTSQDSSDSSKTEDPLVKILSFGPQLEKIANFGDERIQKRVEYSVVEERCLDLNLELRISPPWQDKLH DERNLRFGRVKYRCSACRFGFGNGKECSCNNVKCQTEDSSSSSYSSTDISSSIGYDFLGLNNTRVLDFSTLEMK |
|||
| Alignment |
◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 821/822 (99.9%)（アミノ酸配列で100%）一致しました。
10 20 30 40 50 60 70 80 90 100
AT4G34 ATGGGAAGGTCTCCTTGCTGTGAGAAAGACCACACAAACAAAGGAGCTTGGACTAAGGAAGAAGACGATAAGCTCATCTCTTACATCAAAGCTCACGGTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02H ATGGGAAGGTCTCCTTGCTGTGAGAAAGACCACACAAACAAAGGAGCTTGGACTAAGGAAGAAGACGATAAGCTCATCTCTTACATCAAAGCTCACGGTG
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT4G34 AAGGTTGTTGGCGTTCTCTTCCTAGATCCGCCGGTCTTCAACGTTGCGGAAAAAGCTGTCGTCTCCGATGGATTAACTATCTCCGACCTGATCTCAAGAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02H AAGGTTGTTGGCGTTCTCTTCCTAGATCCGCCGGTCTTCAACGTTGCGGAAAAAGCTGTCGTCTCCGATGGATTAACTATCTCCGACCTGATCTCAAGAG
110 120 130 140 150 160 170 180 190 200
210 220 230 240 250 260 270 280 290 300
AT4G34 GGGTAACTTCACCCTCGAAGAAGATGATCTCATCATCAAACTACATAGCCTTCTCGGTAACAAGTGGTCTCTTATTGCGACGAGATTACCAGGAAGAACA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02H GGGTAACTTCACCCTCGAAGAAGATGATCTCATCATCAAACTACATAGCCTTCTCGGTAACAAGTGGTCTCTTATTGCGACGAGATTACCAGGAAGAACA
210 220 230 240 250 260 270 280 290 300
310 320 330 340 350 360 370 380 390 400
AT4G34 GATAACGAGATTAAGAATTACTGGAACACACATGTTAAGAGGAAGCTATTAAGAAAAGGGATTGATCCGGCGACTCATCGACCTATCAACGAGACCAAAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02H GATAACGAGATTAAGAATTACTGGAACACACATGTTAAGAGGAAGCTATTAAGAAAAGGGATTGATCCGGCGACTCATCGACCTATCAACGAGACCAAAA
310 320 330 340 350 360 370 380 390 400
410 420 430 440 450 460 470 480 490 500
AT4G34 CTTCTCAAGATTCGTCTGATTCTAGTAAAACAGAGGACCCTCTTGTCAAGATTCTCTCTTTTGGTCCTCAGCTGGAGAAAATAGCAAATTTCGGGGACGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02H CTTCTCAAGATTCGTCTGATTCTAGTAAAACAGAGGACCCTCTTGTCAAGATTCTCTCTTTTGGTCCTCAGCTGGAGAAAATAGCAAATTTCGGGGACGA
410 420 430 440 450 460 470 480 490 500
510 520 530 540 550 560 570 580 590 600
AT4G34 GAGAATTCAAAAGAGAGTTGAGTACTCAGTTGTTGAAGAAAGATGTCTGGACTTGAATCTTGAGCTTAGGATCAGTCCACCATGGCAAGACAAGCTCCAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02H GAGAATTCAAAAGAGAGTTGAGTACTCAGTTGTTGAAGAAAGATGTCTGGACTTGAATCTTGAGCTTAGGATCAGTCCACCATGGCAAGACAAGCTCCAT
510 520 530 540 550 560 570 580 590 600
610 620 630 640 650 660 670 680 690 700
AT4G34 GATGAGAGGAACCTAAGGTTTGGGAGAGTGAAGTATAGGTGCAGTGCGTGCCGTTTTGGATTCGGGAACGGCAAGGAGTGTAGCTGTAATAATGTGAAAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02H GATGAGAGGAACCTAAGGTTTGGGAGAGTGAAGTATAGGTGCAGTGCGTGCCGTTTTGGATTCGGGAACGGCAAGGAGTGTAGCTGTAATAATGTGAAAT
610 620 630 640 650 660 670 680 690 700
710 720 730 740 750 760 770 780 790 800
AT4G34 GTCAAACAGAGGACAGTAGTAGCAGCAGTTATTCTTCAACCGACATTAGTAGTAGCATTGGTTATGACTTCTTGGGTCTAAACAACACTAGGGTTTTGGA
:::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02H GTCAAACAGAGGACAGTAGTAGCAGCAGCTATTCTTCAACCGACATTAGTAGTAGCATTGGTTATGACTTCTTGGGTCTAAACAACACTAGGGTTTTGGA
710 720 730 740 750 760 770 780 790 800
810 820
AT4G34 TTTTAGCACTTTGGAAATGAAA
::::::::::::::::::::::
RE_02H TTTTAGCACTTTGGAAATGAAA
810 820
10 20 30 40 50 60 70 80 90 100
AT4G34 MGRSPCCEKDHTNKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINYLRPDLKRGNFTLEEDDLIIKLHSLLGNKWSLIATRLPGRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02H MGRSPCCEKDHTNKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINYLRPDLKRGNFTLEEDDLIIKLHSLLGNKWSLIATRLPGRT
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT4G34 DNEIKNYWNTHVKRKLLRKGIDPATHRPINETKTSQDSSDSSKTEDPLVKILSFGPQLEKIANFGDERIQKRVEYSVVEERCLDLNLELRISPPWQDKLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02H DNEIKNYWNTHVKRKLLRKGIDPATHRPINETKTSQDSSDSSKTEDPLVKILSFGPQLEKIANFGDERIQKRVEYSVVEERCLDLNLELRISPPWQDKLH
110 120 130 140 150 160 170 180 190 200
210 220 230 240 250 260 270
AT4G34 DERNLRFGRVKYRCSACRFGFGNGKECSCNNVKCQTEDSSSSSYSSTDISSSIGYDFLGLNNTRVLDFSTLEMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_02H DERNLRFGRVKYRCSACRFGFGNGKECSCNNVKCQTEDSSSSSYSSTDISSSIGYDFLGLNNTRVLDFSTLEMK
210 220 230 240 250 260 270
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