◆◆◆RE_02H06 detail◆◆◆

Code name	RE_02H06
Locus	AT5G08520
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment
sequence	>RE_02H06_894bp ATGACGGTGGAGGAAGTTAGTGATGGTTCTGTGTGGAGTAGGGAGGATGATATTGCCTTTGAGAGAGCTCTAGCCAATAATACCGATGAATCAGAGGAAC GGTGGGAGAAGATTGCTGCAGACGTTCCAGGCAAAAGTGTTGAACAGATTAAAGAACATTACGAGCTTTTAGTTGAAGATGTTACTAGGATTGAATCAGG ATGTGTGCCTCTTCCTGCCTATGGGTCTCCTGAAGGATCGAATGGCCATGCTGGTGATGAAGGAGCAAGTAGTAAGAAAGGAGGTAACAGTCATGCGGGA GAGTCTAACCAAGCAGGTAAATCAAAGTCCGATCAAGAACGACGAAAGGGTATCGCGTGGACAGAAGATGAGCACAGGTTATTTCTTCTTGGTTTGGATA AGTACGGGAAAGGTGATTGGCGTAGCATTTCTCGCAACTTTGTAGTAACAAGAACACCGACCCAAGTTGCGAGCCATGCTCAAAAGTATTTCATTCGTCT AAATTCAATGAACAAAGACAGAAGGCGATCAAGCATTCACGACATCACTAGTGTTGGCAACGCAGATGTCTCAACGCCACAAGGACCAATCACTGGTCAG AACAACAGCAATAACAACAACAACAACAACAACAACAACAGTTCTCCTGCTGTTGCTGGAGGAGGAAACAAATCAGCCAAGCAAGCCGTCTCTCAAGCAC CACCTGGACCTCCTATGTATGGAACACCCGCCATAGGTCAGCCAGCAGTTGGAACACCAGTGAACCTCCCAGCTCCACCTCACATGGCTTATGGAGTTCA TGCGGCTCCAGTCCCTGGCTCAGTGGTTCCTGGTGCAGCAATGAACATTGGTCAAATGCCGTACACGATGCCGCGTACACCAACGGCTCATAGG >RE_02H06_translated MTVEEVSDGSVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVEDVTRIESGCVPLPAYGSPEGSNGHAGDEGASSKKGGNSHAG ESNQAGKSKSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVGNADVSTPQGPITGQ NNSNNNNNNNNNNSSPAVAGGGNKSAKQAVSQAPPGPPMYGTPAIGQPAVGTPVNLPAPPHMAYGVHAAPVPGSVVPGAAMNIGQMPYTMPRTPTAHR
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 893/894 (99.9%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT5G08 ATGACGGTGGAGGAAGTTAGTGATGGTTCTGTGTGGAGTAGGGAGGATGATATTGCCTTTGAGAGAGCTCTAGCCAATAATACCGATGAATCAGAGGAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02H ATGACGGTGGAGGAAGTTAGTGATGGTTCTGTGTGGAGTAGGGAGGATGATATTGCCTTTGAGAGAGCTCTAGCCAATAATACCGATGAATCAGAGGAAC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G08 GGTGGGAGAAGATTGCTGCAGACGTTCCAGGCAAAAGTGTTGAACAGATTAAAGAACATTACGAGCTTTTAGTTGAAGATGTTACTAGGATTGAATCAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02H GGTGGGAGAAGATTGCTGCAGACGTTCCAGGCAAAAGTGTTGAACAGATTAAAGAACATTACGAGCTTTTAGTTGAAGATGTTACTAGGATTGAATCAGG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G08 ATGTGTGCCTCTTCCTGCCTATGGGTCTCCTGAAGGATCGAATGGCCATGCTGGTGATGAAGGAGCAAGTAGTAAGAAAGGAGGTAACAGTCATGCGGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02H ATGTGTGCCTCTTCCTGCCTATGGGTCTCCTGAAGGATCGAATGGCCATGCTGGTGATGAAGGAGCAAGTAGTAAGAAAGGAGGTAACAGTCATGCGGGA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT5G08 GAGTCTAACCAAGCAGGTAAATCAAAGTCCGATCAAGAACGACGAAAGGGTATCGCGTGGACAGAAGATGAGCACAGGTTATTTCTTCTTGGTTTGGATA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02H GAGTCTAACCAAGCAGGTAAATCAAAGTCCGATCAAGAACGACGAAAGGGTATCGCGTGGACAGAAGATGAGCACAGGTTATTTCTTCTTGGTTTGGATA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT5G08 AGTACGGGAAAGGTGATTGGCGTAGCATTTCTCGCAACTTTGTAGTAACAAGAACACCGACCCAAGTTGCGAGCCATGCTCAAAAGTATTTCATTCGTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02H AGTACGGGAAAGGTGATTGGCGTAGCATTTCTCGCAACTTTGTAGTAACAAGAACACCGACCCAAGTTGCGAGCCATGCTCAAAAGTATTTCATTCGTCT 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT5G08 AAATTCAATGAACAAAGACAGAAGGCGATCAAGCATTCACGACATCACTAGTGTTGGCAACGCAGATGTCTCAACGCCACAAGGACCAATCACTGGTCAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02H AAATTCAATGAACAAAGACAGAAGGCGATCAAGCATTCACGACATCACTAGTGTTGGCAACGCAGATGTCTCAACGCCACAAGGACCAATCACTGGTCAG 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT5G08 AACAACAGCAATAACAACAACAACAACAACAACAACAACAGTTCTCCTGCTGTTGCTGGAGGAGGAAACAAATCAGCCAAGCAAGCCGTCTCTCAAGCAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02H AACAACAGCAATAACAACAACAACAACAACAACAACAACAGTTCTCCTGCTGTTGCTGGAGGAGGAAACAAATCAGCCAAGCAAGCCGTCTCTCAAGCAC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT5G08 CACCTGGACCTCCTATGTATGGAACACCCGCCATAGGTCAGCCAGCAGTTGGAACACCAGTGAACCTCCCAGCTCCACCTCACATGGCTTATGGAGTTCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02H CACCTGGACCTCCTATGTATGGAACACCCGCCATAGGTCAGCCAGCAGTTGGAACACCAGTGAACCTCCCAGCTCCACCTCACATGGCTTATGGAGTTCA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 AT5G08 TGCGGCTCCAGTCCCTGGCTCAGTGGTTCCTGGTGCAGCAATGAACATTGGTCAAATGCCGTACACCATGCCGCGTACACCAACGGCTCATAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::: RE_02H TGCGGCTCCAGTCCCTGGCTCAGTGGTTCCTGGTGCAGCAATGAACATTGGTCAAATGCCGTACACGATGCCGCGTACACCAACGGCTCATAGG 810 820 830 840 850 860 870 880 890 10 20 30 40 50 60 70 80 90 100 AT5G08 MTVEEVSDGSVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVEDVTRIESGCVPLPAYGSPEGSNGHAGDEGASSKKGGNSHAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02H MTVEEVSDGSVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVEDVTRIESGCVPLPAYGSPEGSNGHAGDEGASSKKGGNSHAG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G08 ESNQAGKSKSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVGNADVSTPQGPITGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02H ESNQAGKSKSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVGNADVSTPQGPITGQ 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 AT5G08 NNSNNNNNNNNNNSSPAVAGGGNKSAKQAVSQAPPGPPMYGTPAIGQPAVGTPVNLPAPPHMAYGVHAAPVPGSVVPGAAMNIGQMPYTMPRTPTAHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02H NNSNNNNNNNNNNSSPAVAGGGNKSAKQAVSQAPPGPPMYGTPAIGQPAVGTPVNLPAPPHMAYGVHAAPVPGSVVPGAAMNIGQMPYTMPRTPTAHR 210 220 230 240 250 260 270 280 290

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