◆◆◆RE_02H07 detail◆◆◆

Code name	RE_02H07
Locus	AT5G10280
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment
sequence	>RE_02H07_1002bp ATGGGAAGATCTCCTATCTCTGATGACTCTGGTCTCAAGAAAGGTCCTTGGACTCCTGATGAAGATGAGAAACTTGTCAACTATGTTCAAAAACATGGTC ATAGTAGCTGGAGAGCCCTTCCCAAACTCGCTGGTCTTAACAGGTGTGGGAAGAGTTGCAGGCTAAGATGGACGAACTACTTGAGACCAGACATCAAGAG AGGGAGATTCTCTCCGGACGAGGAACAGACTATCTTGAATCTTCATTCAGTTCTTGGAAACAAGTGGTCAACGATTGCGAATCAGTTACCAGGGAGAACA GATAACGAGATCAAGAATTTCTGGAACACTCATTTGAAGAAGAAGCTGATTCAGATGGGTTTTGATCCAATGACTCACCGTCCAAGAACCGATATCTTCT CCGGCTTATCTCAGCTCATGTCTTTGTCTTCTAACCTGAGAGGCTTCGTTGATCTGCAACAACAGTTTCCTATTGATCAAGAACACACTATACTCAAACT CCAAACCGAGATGGCCAAACTCCAATTGTTCCAATACCTTCTTCAACCGTCTTCCATGAGTAACAATGTTAACCCTAATGACTTTGACACTCTCAGTCTC CTTAACTCTATTGCCTCTTTCAAAGAGACCAGTAATAATACCACCAGCAACAATCTCGACCTCGGTTTCCTCGGCTCTTATCTTCAGGACTTCCACAGCT TACCTTCCCTGAAAACCCTAAATTCCAACATGGAACCATCATCTGTTTTCCCCCAGAATCTTGATGACAATCACTTCAAATTCTCCACTCAAAGAGAAAA CCTACCCGTGTCTCCAATCTGGCTCTCGGATCCATCCAGCACAACTCCTGCTCATGTGAATGATGATCTGATTTTTAACCAATACGGTATTGAAGATGTC AATAGCAATATCACATCTTCAAGCGGTCAAGAATCAGGAGCTTCAGCTTCAGCTGCATGGCCTGATCATCTATTGGATGATTCTATATTTTCCGACATTC CT >RE_02H07_translated MGRSPISDDSGLKKGPWTPDEDEKLVNYVQKHGHSSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGRFSPDEEQTILNLHSVLGNKWSTIANQLPGRT DNEIKNFWNTHLKKKLIQMGFDPMTHRPRTDIFSGLSQLMSLSSNLRGFVDLQQQFPIDQEHTILKLQTEMAKLQLFQYLLQPSSMSNNVNPNDFDTLSL LNSIASFKETSNNTTSNNLDLGFLGSYLQDFHSLPSLKTLNSNMEPSSVFPQNLDDNHFKFSTQRENLPVSPIWLSDPSSTTPAHVNDDLIFNQYGIEDV NSNITSSSGQESGASASAAWPDHLLDDSIFSDIP
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1001/1002 (99.9%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT5G10 ATGGGAAGATCTCCTATCTCTGATGACTCTGGTCTCAAGAAAGGTCCTTGGACTCCTGATGAAGATGAGAAACTTGTCAACTATGTTCAAAAACATGGTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02H ATGGGAAGATCTCCTATCTCTGATGACTCTGGTCTCAAGAAAGGTCCTTGGACTCCTGATGAAGATGAGAAACTTGTCAACTATGTTCAAAAACATGGTC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G10 ATAGTAGCTGGAGAGCCCTTCCCAAACTCGCTGGTCTTAACAGGTGTGGGAAGAGTTGCAGGCTAAGATGGACGAACTACTTGAGACCAGACATCAAGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02H ATAGTAGCTGGAGAGCCCTTCCCAAACTCGCTGGTCTTAACAGGTGTGGGAAGAGTTGCAGGCTAAGATGGACGAACTACTTGAGACCAGACATCAAGAG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G10 AGGGAGATTCTCTCCGGACGAGGAACAGACTATCTTGAATCTTCATTCAGTTCTTGGAAACAAGTGGTCAACGATTGCGAATCAGTTACCAGGGAGAACA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02H AGGGAGATTCTCTCCGGACGAGGAACAGACTATCTTGAATCTTCATTCAGTTCTTGGAAACAAGTGGTCAACGATTGCGAATCAGTTACCAGGGAGAACA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT5G10 GATAACGAGATCAAGAATTTCTGGAACACTCATTTGAAGAAGAAGCTGATTCAGATGGGTTTTGATCCAATGACTCACCGTCCAAGAACCGATATCTTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02H GATAACGAGATCAAGAATTTCTGGAACACTCATTTGAAGAAGAAGCTGATTCAGATGGGTTTTGATCCAATGACTCACCGTCCAAGAACCGATATCTTCT 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT5G10 CCGGCTTATCTCAGCTCATGTCTTTGTCTTCTAACCTGAGAGGCTTTGTTGATCTGCAACAACAGTTTCCTATTGATCAAGAACACACTATACTCAAACT :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02H CCGGCTTATCTCAGCTCATGTCTTTGTCTTCTAACCTGAGAGGCTTCGTTGATCTGCAACAACAGTTTCCTATTGATCAAGAACACACTATACTCAAACT 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT5G10 CCAAACCGAGATGGCCAAACTCCAATTGTTCCAATACCTTCTTCAACCGTCTTCCATGAGTAACAATGTTAACCCTAATGACTTTGACACTCTCAGTCTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02H CCAAACCGAGATGGCCAAACTCCAATTGTTCCAATACCTTCTTCAACCGTCTTCCATGAGTAACAATGTTAACCCTAATGACTTTGACACTCTCAGTCTC 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT5G10 CTTAACTCTATTGCCTCTTTCAAAGAGACCAGTAATAATACCACCAGCAACAATCTCGACCTCGGTTTCCTCGGCTCTTATCTTCAGGACTTCCACAGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02H CTTAACTCTATTGCCTCTTTCAAAGAGACCAGTAATAATACCACCAGCAACAATCTCGACCTCGGTTTCCTCGGCTCTTATCTTCAGGACTTCCACAGCT 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT5G10 TACCTTCCCTGAAAACCCTAAATTCCAACATGGAACCATCATCTGTTTTCCCCCAGAATCTTGATGACAATCACTTCAAATTCTCCACTCAAAGAGAAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02H TACCTTCCCTGAAAACCCTAAATTCCAACATGGAACCATCATCTGTTTTCCCCCAGAATCTTGATGACAATCACTTCAAATTCTCCACTCAAAGAGAAAA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT5G10 CCTACCCGTGTCTCCAATCTGGCTCTCGGATCCATCCAGCACAACTCCTGCTCATGTGAATGATGATCTGATTTTTAACCAATACGGTATTGAAGATGTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02H CCTACCCGTGTCTCCAATCTGGCTCTCGGATCCATCCAGCACAACTCCTGCTCATGTGAATGATGATCTGATTTTTAACCAATACGGTATTGAAGATGTC 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT5G10 AATAGCAATATCACATCTTCAAGCGGTCAAGAATCAGGAGCTTCAGCTTCAGCTGCATGGCCTGATCATCTATTGGATGATTCTATATTTTCCGACATTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02H AATAGCAATATCACATCTTCAAGCGGTCAAGAATCAGGAGCTTCAGCTTCAGCTGCATGGCCTGATCATCTATTGGATGATTCTATATTTTCCGACATTC 910 920 930 940 950 960 970 980 990 1000 AT5G10 CT :: RE_02H CT 10 20 30 40 50 60 70 80 90 100 AT5G10 MGRSPISDDSGLKKGPWTPDEDEKLVNYVQKHGHSSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGRFSPDEEQTILNLHSVLGNKWSTIANQLPGRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02H MGRSPISDDSGLKKGPWTPDEDEKLVNYVQKHGHSSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGRFSPDEEQTILNLHSVLGNKWSTIANQLPGRT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G10 DNEIKNFWNTHLKKKLIQMGFDPMTHRPRTDIFSGLSQLMSLSSNLRGFVDLQQQFPIDQEHTILKLQTEMAKLQLFQYLLQPSSMSNNVNPNDFDTLSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02H DNEIKNFWNTHLKKKLIQMGFDPMTHRPRTDIFSGLSQLMSLSSNLRGFVDLQQQFPIDQEHTILKLQTEMAKLQLFQYLLQPSSMSNNVNPNDFDTLSL 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G10 LNSIASFKETSNNTTSNNLDLGFLGSYLQDFHSLPSLKTLNSNMEPSSVFPQNLDDNHFKFSTQRENLPVSPIWLSDPSSTTPAHVNDDLIFNQYGIEDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_02H LNSIASFKETSNNTTSNNLDLGFLGSYLQDFHSLPSLKTLNSNMEPSSVFPQNLDDNHFKFSTQRENLPVSPIWLSDPSSTTPAHVNDDLIFNQYGIEDV 210 220 230 240 250 260 270 280 290 300 310 320 330 AT5G10 NSNITSSSGQESGASASAAWPDHLLDDSIFSDIP :::::::::::::::::::::::::::::::::: RE_02H NSNITSSSGQESGASASAAWPDHLLDDSIFSDIP 310 320 330

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