◆◆◆RE_0303 detail◆◆◆

Code name	RE_0303
Locus	AT1G06850
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.40%一致
comment	0115_アミノ酸配列70%以上一致
sequence	>RE_0303_1011bp ATGGAGAAATCAGATCCTCCACCAGTCCCAAAGCCCGGCGCCACTATTATCCCCTCCTCCGATCCAATTCCTAATGCCGATCCGATTCCATCTTCTTCCT TCCACCGCCGATCTCGCTCCGACGATATGTCCATGTTCATGTTCATGGATCCCCTCTCCTCCGCCGCACCACCTTCCTCCGACGACCTTCCCTCCGACGA CGATCTCTTCTCTTCTTTCATCGATGTCGATAGCCTCACCTCTAATCCCAATCCCTTTCAAAATCCTTCCCTCTCCTCCAACTCCGTTTCCGGCGCTGCT AATCCTCCTCCTCCTCCTTCCTCTCATCCTCGCCACCGTCACAGCAATTCCGTTGACGCTGGATGCGCCATGTATGCCGGTGATATCATGGACGCTAAGA AAGCTATGCCTCCTGAAAAACTCTCTGAGCTTTGGAACATCGATCCCAAACGCGCCAAAAGGATTCTAGCGAATCGACAATCTGCAGCTCGATCCAAAGA GGGAAAAGCTCGATACATTCAAGAACTTGAGCGCAAAGTTCAATCTCTTCAAACCGAAGCTACCACTCTCTCTGCTCAGCTTACTCTCTACCAGAGAGAC ACAAATGGACTAGCAAACGAAAACACAGAGCTGAAACTTAGGTTGCAAGCAATGGAACAACAAGCTCAGCTTCGTAATGCTTTAAACGAAGCGTTGAGGA AAGAAGTTGAAAGGATGAAGATGGAGACAGGAGAAATCTCTGGTAATTCAGATTCGTTTGATATGGGAATGCAGCAGATTCAGTATTCTTCCTCAACTTT CATGGCTATTCCACCATATCATGGCTCAATGAACCTCCATGATATGCAGATGCATTCTAGTTTCAATCCTATGGAGATGTCCAATTCTCAAAGCGTGTCG GACTTTCTACAGAACGGCCGAATGCAAGGGCTGGAGATTAGTAGCAATAGCTCAAGCTTAGTCAAATCTGAAGGACCTTCTCTCTCTGCTAGTGAGAGTA GCTCTGCCTAT >RE_0303_translated MEKSDPPPVPKPGATIIPSSDPIPNADPIPSSSFHRRSRSDDMSMFMFMDPLSSAAPPSSDDLPSDDDLFSSFIDVDSLTSNPNPFQNPSLSSNSVSGAA NPPPPPSSHPRHRHSNSVDAGCAMYAGDIMDAKKAMPPEKLSELWNIDPKRAKRILANRQSAARSKEGKARYIQELERKVQSLQTEATTLSAQLTLYQRD TNGLANENTELKLRLQAMEQQAQLRNALNEALRKEVERMKMETGEISGNSDSFDMGMQQIQYSSSTFMAIPPYHGSMNLHDMQMHSSFNPMEMSNSQSVS DFLQNGRMQGLEISSNSSSLVKSEGPSLSASESSSAY
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1009/1011 (99.8%)（アミノ酸配列で335/337 (99.4%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G06 ATGGAGAAATCAGATCCTCCACCAGTCCCAAAGCCCGGCGCCACTATTATCCCCTCCTCCGATCCAATTCCTAATGCCGATCCGATTCCATCTTCTTCCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_030 ATGGAGAAATCAGATCCTCCACCAGTCCCAAAGCCCGGCGCCACTATTATCCCCTCCTCCGATCCAATTCCTAATGCCGATCCGATTCCATCTTCTTCCT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G06 TCCACCGCCGATCTCGCTCCGACGATATGTCCATGTTCATGTTCATGGATCCCCTCTCCTCCGCCGCACCACCTTCCTCCGACGACCTTCCCTCCGACGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_030 TCCACCGCCGATCTCGCTCCGACGATATGTCCATGTTCATGTTCATGGATCCCCTCTCCTCCGCCGCACCACCTTCCTCCGACGACCTTCCCTCCGACGA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G06 CGATCTCTTCTCTTCTTTCATCGATGTCGATAGCCTCACCTCTAATCCCAATCCCTTTCAAAATCCTTCCCTCTCCTCCAACTCCGTTTCCGGCGCTGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_030 CGATCTCTTCTCTTCTTTCATCGATGTCGATAGCCTCACCTCTAATCCCAATCCCTTTCAAAATCCTTCCCTCTCCTCCAACTCCGTTTCCGGCGCTGCT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G06 AATCCTCCTCCTCCTCCTTCCTCTCGTCCTCGCCACCGTCACAGCAATTCCGTTGACGCTGGATGCGCCATGTATGCCGGTGATATCATGGACGCTAAGA ::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_030 AATCCTCCTCCTCCTCCTTCCTCTCATCCTCGCCACCGTCACAGCAATTCCGTTGACGCTGGATGCGCCATGTATGCCGGTGATATCATGGACGCTAAGA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G06 AAGCTATGCCTCCTGAAAAACTCTCTGAGCTTTGGAACATCGATCCCAAACGCGCCAAAAGGATTCTAGCGAATCGACAATCTGCAGCTCGATCCAAAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_030 AAGCTATGCCTCCTGAAAAACTCTCTGAGCTTTGGAACATCGATCCCAAACGCGCCAAAAGGATTCTAGCGAATCGACAATCTGCAGCTCGATCCAAAGA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G06 GAGAAAAGCTCGATACATTCAAGAACTTGAGCGCAAAGTTCAATCTCTTCAAACCGAAGCTACCACTCTCTCTGCTCAGCTTACTCTCTACCAGAGAGAC : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_030 GGGAAAAGCTCGATACATTCAAGAACTTGAGCGCAAAGTTCAATCTCTTCAAACCGAAGCTACCACTCTCTCTGCTCAGCTTACTCTCTACCAGAGAGAC 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G06 ACAAATGGACTAGCAAACGAAAACACAGAGCTGAAACTTAGGTTGCAAGCAATGGAACAACAAGCTCAGCTTCGTAATGCTTTAAACGAAGCGTTGAGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_030 ACAAATGGACTAGCAAACGAAAACACAGAGCTGAAACTTAGGTTGCAAGCAATGGAACAACAAGCTCAGCTTCGTAATGCTTTAAACGAAGCGTTGAGGA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G06 AAGAAGTTGAAAGGATGAAGATGGAGACAGGAGAAATCTCTGGTAATTCAGATTCGTTTGATATGGGAATGCAGCAGATTCAGTATTCTTCCTCAACTTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_030 AAGAAGTTGAAAGGATGAAGATGGAGACAGGAGAAATCTCTGGTAATTCAGATTCGTTTGATATGGGAATGCAGCAGATTCAGTATTCTTCCTCAACTTT 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G06 CATGGCTATTCCACCATATCATGGCTCAATGAACCTCCATGATATGCAGATGCATTCTAGTTTCAATCCTATGGAGATGTCCAATTCTCAAAGCGTGTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_030 CATGGCTATTCCACCATATCATGGCTCAATGAACCTCCATGATATGCAGATGCATTCTAGTTTCAATCCTATGGAGATGTCCAATTCTCAAAGCGTGTCG 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT1G06 GACTTTCTACAGAACGGCCGAATGCAAGGGCTGGAGATTAGTAGCAATAGCTCAAGCTTAGTCAAATCTGAAGGACCTTCTCTCTCTGCTAGTGAGAGTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_030 GACTTTCTACAGAACGGCCGAATGCAAGGGCTGGAGATTAGTAGCAATAGCTCAAGCTTAGTCAAATCTGAAGGACCTTCTCTCTCTGCTAGTGAGAGTA 910 920 930 940 950 960 970 980 990 1000 1010 AT1G06 GCTCTGCCTAT ::::::::::: RE_030 GCTCTGCCTAT 1010 10 20 30 40 50 60 70 80 90 100 AT1G06 MEKSDPPPVPKPGATIIPSSDPIPNADPIPSSSFHRRSRSDDMSMFMFMDPLSSAAPPSSDDLPSDDDLFSSFIDVDSLTSNPNPFQNPSLSSNSVSGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_030 MEKSDPPPVPKPGATIIPSSDPIPNADPIPSSSFHRRSRSDDMSMFMFMDPLSSAAPPSSDDLPSDDDLFSSFIDVDSLTSNPNPFQNPSLSSNSVSGAA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G06 NPPPPPSSRPRHRHSNSVDAGCAMYAGDIMDAKKAMPPEKLSELWNIDPKRAKRILANRQSAARSKERKARYIQELERKVQSLQTEATTLSAQLTLYQRD :::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::: RE_030 NPPPPPSSHPRHRHSNSVDAGCAMYAGDIMDAKKAMPPEKLSELWNIDPKRAKRILANRQSAARSKEGKARYIQELERKVQSLQTEATTLSAQLTLYQRD 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G06 TNGLANENTELKLRLQAMEQQAQLRNALNEALRKEVERMKMETGEISGNSDSFDMGMQQIQYSSSTFMAIPPYHGSMNLHDMQMHSSFNPMEMSNSQSVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_030 TNGLANENTELKLRLQAMEQQAQLRNALNEALRKEVERMKMETGEISGNSDSFDMGMQQIQYSSSTFMAIPPYHGSMNLHDMQMHSSFNPMEMSNSQSVS 210 220 230 240 250 260 270 280 290 300 310 320 330 AT1G06 DFLQNGRMQGLEISSNSSSLVKSEGPSLSASESSSAY ::::::::::::::::::::::::::::::::::::: RE_030 DFLQNGRMQGLEISSNSSSLVKSEGPSLSASESSSAY 310 320 330

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