◆◆◆RE_0314 detail◆◆◆

Code name	RE_0314
Locus	AT1G49720
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment	0311_アミノ酸配列100%一致
sequence	>RE_0314_1176bp ATGGGTACTCACATTGATATCAACAACTTAGGCGGCGATACTTCTAGAGGGAATGAGTCAAAGCCATTGGCGAGGCAGTCTTCGTTATATTCCTTAACGT TTGATGAGCTTCAGAGCACATTAGGTGAGCCGGGGAAAGATTTTGGGTCTATGAATATGGACGAGTTACTCAAGAACATATGGACTGCTGAGGATACTCA AGCCTTTATGACTACTACATCTTCGGTTGCAGCCCCGGGACCTAGTGGTTTTGTTCCGGGAGGAAATGGTTTACAGAGGCAAGGCTCCTTGACCTTGCCT AGAACGCTTAGTCAGAAGACTGTCGATGAAGTCTGGAAATACCTGAATTCGAAAGAAGGTAGTAATGGGAATACTGGAACGGATGCGCTTGAGAGGCAAC AGACTTTAGGGGAAATGACTCTGGAAGATTTCTTACTCCGTGCTGGCGTTGTTAAAGAAGATAATACTCAGCAGAACGAAAACAGTAGTAGCGGGTTTTA TGCTAACAACGGTGCTGCTGGTTTGGAGTTTGGATTTGGTCAGCCGAATCAAAACAGCATATCGTTCAACGGGAACAATAGTTCTATGATCATGAATCAA GCACCTGGTTTAGGCCTCAAAGTTGGTGGAACCATGCAGCAGCAGCAGCAGCCACATCAGCAGCAGTTGCAGCAGCCACATCAGAGACTGCCTCCAACTA TCTTTCCAAAACAAGCGAATGTAACATTTGCGGCGCCTGTAAATATGGTCAACAGGGGTTTATTTGAGACTAGCGCAGATGGTCCAGCCAACAGTAATAT GGGAGGAGCAGGGGGTACTGTTACAGCTACTTCTCCTGGGACGAGCAGTGCAGAAAACAATACTTGGTCATCACCAGTTCCTTACGTGTTTGGTCGGGGA AGAAGAAGCAATACGGGCCTGGAGAAGGTTGTTGAGAGAAGGCAAAAGAGAATGATCAAGAATCGGGAATCCGCTGCTAGATCAAGGGCTCGAAAACAGG CTTATACCTTGGAACTGGAAGCTGAGATTGAAAGTCTCAAGCTAGTGAATCAAGATTTGCAGAAGAAACAGGCTGAAATAATGAAAACCCATAATAGTGA GCTAAAGGAATTTTCGAAGCAGCCTCCATTGCTGGCCAAAAGACAATGCTTGAGAAGAACCCTTACCGGTCCGTGG >RE_0314_translated MGTHIDINNLGGDTSRGNESKPLARQSSLYSLTFDELQSTLGEPGKDFGSMNMDELLKNIWTAEDTQAFMTTTSSVAAPGPSGFVPGGNGLQRQGSLTLP RTLSQKTVDEVWKYLNSKEGSNGNTGTDALERQQTLGEMTLEDFLLRAGVVKEDNTQQNENSSSGFYANNGAAGLEFGFGQPNQNSISFNGNNSSMIMNQ APGLGLKVGGTMQQQQQPHQQQLQQPHQRLPPTIFPKQANVTFAAPVNMVNRGLFETSADGPANSNMGGAGGTVTATSPGTSSAENNTWSSPVPYVFGRG RRSNTGLEKVVERRQKRMIKNRESAARSRARKQAYTLELEAEIESLKLVNQDLQKKQAEIMKTHNSELKEFSKQPPLLAKRQCLRRTLTGPW
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1175/1176 (99.9%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G49 ATGGGTACTCACATTGATATCAACAACTTAGGCGGCGATACTTCTAGAGGGAATGAGTCAAAGCCATTGGCGAGGCAGTCTTCGTTATATTCCTTAACGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_031 ATGGGTACTCACATTGATATCAACAACTTAGGCGGCGATACTTCTAGAGGGAATGAGTCAAAGCCATTGGCGAGGCAGTCTTCGTTATATTCCTTAACGT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G49 TTGATGAGCTTCAGAGCACATTAGGTGAGCCGGGGAAAGATTTTGGGTCTATGAATATGGATGAGTTACTCAAGAACATATGGACTGCTGAGGATACTCA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: RE_031 TTGATGAGCTTCAGAGCACATTAGGTGAGCCGGGGAAAGATTTTGGGTCTATGAATATGGACGAGTTACTCAAGAACATATGGACTGCTGAGGATACTCA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G49 AGCCTTTATGACTACTACATCTTCGGTTGCAGCCCCGGGACCTAGTGGTTTTGTTCCGGGAGGAAATGGTTTACAGAGGCAAGGCTCCTTGACCTTGCCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_031 AGCCTTTATGACTACTACATCTTCGGTTGCAGCCCCGGGACCTAGTGGTTTTGTTCCGGGAGGAAATGGTTTACAGAGGCAAGGCTCCTTGACCTTGCCT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G49 AGAACGCTTAGTCAGAAGACTGTCGATGAAGTCTGGAAATACCTGAATTCGAAAGAAGGTAGTAATGGGAATACTGGAACGGATGCGCTTGAGAGGCAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_031 AGAACGCTTAGTCAGAAGACTGTCGATGAAGTCTGGAAATACCTGAATTCGAAAGAAGGTAGTAATGGGAATACTGGAACGGATGCGCTTGAGAGGCAAC 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G49 AGACTTTAGGGGAAATGACTCTGGAAGATTTCTTACTCCGTGCTGGCGTTGTTAAAGAAGATAATACTCAGCAGAACGAAAACAGTAGTAGCGGGTTTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_031 AGACTTTAGGGGAAATGACTCTGGAAGATTTCTTACTCCGTGCTGGCGTTGTTAAAGAAGATAATACTCAGCAGAACGAAAACAGTAGTAGCGGGTTTTA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G49 TGCTAACAACGGTGCTGCTGGTTTGGAGTTTGGATTTGGTCAGCCGAATCAAAACAGCATATCGTTCAACGGGAACAATAGTTCTATGATCATGAATCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_031 TGCTAACAACGGTGCTGCTGGTTTGGAGTTTGGATTTGGTCAGCCGAATCAAAACAGCATATCGTTCAACGGGAACAATAGTTCTATGATCATGAATCAA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G49 GCACCTGGTTTAGGCCTCAAAGTTGGTGGAACCATGCAGCAGCAGCAGCAGCCACATCAGCAGCAGTTGCAGCAGCCACATCAGAGACTGCCTCCAACTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_031 GCACCTGGTTTAGGCCTCAAAGTTGGTGGAACCATGCAGCAGCAGCAGCAGCCACATCAGCAGCAGTTGCAGCAGCCACATCAGAGACTGCCTCCAACTA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G49 TCTTTCCAAAACAAGCGAATGTAACATTTGCGGCGCCTGTAAATATGGTCAACAGGGGTTTATTTGAGACTAGCGCAGATGGTCCAGCCAACAGTAATAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_031 TCTTTCCAAAACAAGCGAATGTAACATTTGCGGCGCCTGTAAATATGGTCAACAGGGGTTTATTTGAGACTAGCGCAGATGGTCCAGCCAACAGTAATAT 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G49 GGGAGGAGCAGGGGGTACTGTTACAGCTACTTCTCCTGGGACGAGCAGTGCAGAAAACAATACTTGGTCATCACCAGTTCCTTACGTGTTTGGTCGGGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_031 GGGAGGAGCAGGGGGTACTGTTACAGCTACTTCTCCTGGGACGAGCAGTGCAGAAAACAATACTTGGTCATCACCAGTTCCTTACGTGTTTGGTCGGGGA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT1G49 AGAAGAAGCAATACGGGCCTGGAGAAGGTTGTTGAGAGAAGGCAAAAGAGAATGATCAAGAATCGGGAATCCGCTGCTAGATCAAGGGCTCGAAAACAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_031 AGAAGAAGCAATACGGGCCTGGAGAAGGTTGTTGAGAGAAGGCAAAAGAGAATGATCAAGAATCGGGAATCCGCTGCTAGATCAAGGGCTCGAAAACAGG 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT1G49 CTTATACCTTGGAACTGGAAGCTGAGATTGAAAGTCTCAAGCTAGTGAATCAAGATTTGCAGAAGAAACAGGCTGAAATAATGAAAACCCATAATAGTGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_031 CTTATACCTTGGAACTGGAAGCTGAGATTGAAAGTCTCAAGCTAGTGAATCAAGATTTGCAGAAGAAACAGGCTGAAATAATGAAAACCCATAATAGTGA 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 AT1G49 GCTAAAGGAATTTTCGAAGCAGCCTCCATTGCTGGCCAAAAGACAATGCTTGAGAAGAACCCTTACCGGTCCGTGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_031 GCTAAAGGAATTTTCGAAGCAGCCTCCATTGCTGGCCAAAAGACAATGCTTGAGAAGAACCCTTACCGGTCCGTGG 1110 1120 1130 1140 1150 1160 1170 10 20 30 40 50 60 70 80 90 100 AT1G49 MGTHIDINNLGGDTSRGNESKPLARQSSLYSLTFDELQSTLGEPGKDFGSMNMDELLKNIWTAEDTQAFMTTTSSVAAPGPSGFVPGGNGLQRQGSLTLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_031 MGTHIDINNLGGDTSRGNESKPLARQSSLYSLTFDELQSTLGEPGKDFGSMNMDELLKNIWTAEDTQAFMTTTSSVAAPGPSGFVPGGNGLQRQGSLTLP 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G49 RTLSQKTVDEVWKYLNSKEGSNGNTGTDALERQQTLGEMTLEDFLLRAGVVKEDNTQQNENSSSGFYANNGAAGLEFGFGQPNQNSISFNGNNSSMIMNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_031 RTLSQKTVDEVWKYLNSKEGSNGNTGTDALERQQTLGEMTLEDFLLRAGVVKEDNTQQNENSSSGFYANNGAAGLEFGFGQPNQNSISFNGNNSSMIMNQ 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G49 APGLGLKVGGTMQQQQQPHQQQLQQPHQRLPPTIFPKQANVTFAAPVNMVNRGLFETSADGPANSNMGGAGGTVTATSPGTSSAENNTWSSPVPYVFGRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_031 APGLGLKVGGTMQQQQQPHQQQLQQPHQRLPPTIFPKQANVTFAAPVNMVNRGLFETSADGPANSNMGGAGGTVTATSPGTSSAENNTWSSPVPYVFGRG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 AT1G49 RRSNTGLEKVVERRQKRMIKNRESAARSRARKQAYTLELEAEIESLKLVNQDLQKKQAEIMKTHNSELKEFSKQPPLLAKRQCLRRTLTGPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_031 RRSNTGLEKVVERRQKRMIKNRESAARSRARKQAYTLELEAEIESLKLVNQDLQKKQAEIMKTHNSELKEFSKQPPLLAKRQCLRRTLTGPW 310 320 330 340 350 360 370 380 390

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