◆◆◆RE_0330 detail◆◆◆

Code name	RE_0330
Locus	AT2G36270
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.30%一致
comment	0311_アミノ酸配列70%以上一致
sequence	>RE_0330_1326bp ATGGTAACTAGAGAAACGAAGTTGACGTCAGAGCGAGAAGTAGAGTCGTCCATGGCGCAAGCGAGACATAATGGAGGAGGTGGTGGTGAGAATCATCCGT TTACTTCTTTGGGAAGACAATCCTCTATCTACTCATTGACCCTTGACGAGTTCCAACATGCTTTATGTGAGAACGGCAAGAACTTTGGGTCCATGAACAT GGACGAGTTTCTTGTCTCTATTTGGAACGCAGAGGAGAATAATAACAATCAACAACAAGCAGCAGCAGCTGCAGGTTCACATTCTGTTCCGGCTAATCAC AATGGTTTCAACAACAACAATAACAATGGAGGCGAGGGTGGTGTTGGTGTCTTTAGTGGTGGTTCTAGAGGCAACGAAGATGCTAACAATAAGAGAGGGA TAGCGAACGAGTCTAGTCTTCCTCGACAAGGCTCTTTGACACTTCCAGCTCCGCTTTGTAGGAAGACTGTTGATGAGGTTTGGTCTGATATACATAGAGG TGGTGGTAGCGGTAATGGAGGAGACAGCAATGGACGTATTAGTAGTAGTAATGGACAGAACAATGCTCAGAACGGCGGTGAGACTGCGGCTAGACAACCG ACTTTTGGAGAGATGACACTTGAGGATTTCTTGGTGAAGGCTGGTGTGGTTAGAGAACATCCCACTAATCCTAAACCTAATCCAAACCCGAACCAAAACC AAAACCCGTCTAGTGTAATACCCGCAGCTGCACAGCAACAGCTTTATGGTGTGTTTCAAGGAACCGGTGATCCTTCATTCCCGGGTCAAGCTATGGGTGT GGGTGACCCATCATGTTATGCTAAAAGGACAGGAGGAGGAGGGTATCAACAGGCGCCACCAGTTCAGGCAGGTGTTTGCTATGGAGGTGGCGTTGGGTTT GGAGCGGGTGGACAGCAAATGGGAATGGTTGGACCGTTAAGCCCGGTGTCTTCAGATGGATTAGGACATGGACAAGTGGATAACATAGGAGGTCAGTATG GAGTAGATATGGGAGGGCTAAGGGGAAGGAAAAGAGTAGTGGATGGTCCAGTGGAGAAAGTAGTGGAGAGAAGACAGAGGAGGATGATCAAGAACCGCGA GTCTGCTGCTAGATCTAGAGCAAGAAAACAAGCATATACAGTGGAATTGGAAGCTGAACTTAACCAGTTGAAAGAAGAGAATGCGCAGCTAAAACATGCA TTGGCGGAGTTGGAGAGGAAGAGGAAGCAACAGTATTTTGAGAGTTTGAAGTCAAGGGCACAACCGAAATTGCCGAAATCGAACGGGAGATTGCGGACAT TGATGAGGAACCCGAGTTGTCCACTC >RE_0330_translated MVTRETKLTSEREVESSMAQARHNGGGGGENHPFTSLGRQSSIYSLTLDEFQHALCENGKNFGSMNMDEFLVSIWNAEENNNNQQQAAAAAGSHSVPANH NGFNNNNNNGGEGGVGVFSGGSRGNEDANNKRGIANESSLPRQGSLTLPAPLCRKTVDEVWSDIHRGGGSGNGGDSNGRISSSNGQNNAQNGGETAARQP TFGEMTLEDFLVKAGVVREHPTNPKPNPNPNQNQNPSSVIPAAAQQQLYGVFQGTGDPSFPGQAMGVGDPSCYAKRTGGGGYQQAPPVQAGVCYGGGVGF GAGGQQMGMVGPLSPVSSDGLGHGQVDNIGGQYGVDMGGLRGRKRVVDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLKEENAQLKHA LAELERKRKQQYFESLKSRAQPKLPKSNGRLRTLMRNPSCPL
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1322/1326 (99.7%)（アミノ酸配列で439/442 (99.3%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT2G36 ATGGTAACTAGAGAAACGAAGTTGACGTCAGAGCGAGAAGTAGAGTCGTCCATGGCGCAAGCGAGACATAATGGAGGAGGTGGTGGTGAGAATCATCCGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_033 ATGGTAACTAGAGAAACGAAGTTGACGTCAGAGCGAGAAGTAGAGTCGTCCATGGCGCAAGCGAGACATAATGGAGGAGGTGGTGGTGAGAATCATCCGT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G36 TTACTTCTTTGGGAAGACAATCCTCTATCTACTCATTGACCCTTGACGAGTTCCAACATGCTTTATGTGAGAACGGCAAGAACTTTGGGTCCATGAACAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_033 TTACTTCTTTGGGAAGACAATCCTCTATCTACTCATTGACCCTTGACGAGTTCCAACATGCTTTATGTGAGAACGGCAAGAACTTTGGGTCCATGAACAT 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G36 GGACGAGTTTCTTGTCTCTATTTGGAACGCAGAGGAGAATAATAACAATCAACAACAAGCAGCAGCAGCTGCAGGTTCACATTCTGTTCCGGCTAATCAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_033 GGACGAGTTTCTTGTCTCTATTTGGAACGCAGAGGAGAATAATAACAATCAACAACAAGCAGCAGCAGCTGCAGGTTCACATTCTGTTCCGGCTAATCAC 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT2G36 AATGGTTTCAACAACAACAATAACAATGGAGGCGAGGGTGGTGTTGGTGTCTTTAGTGGTGGTTCTAGAGGCAACGAAGATGCTAACAATAAGAGAGGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_033 AATGGTTTCAACAACAACAATAACAATGGAGGCGAGGGTGGTGTTGGTGTCTTTAGTGGTGGTTCTAGAGGCAACGAAGATGCTAACAATAAGAGAGGGA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT2G36 TAGCGAACGAGTCTAGTCTTCCTCGACAAGGCTCTTTGACACTTCCAGCTCCGCTTTGTAGGAAGACTGTTGATGAGGTTTGGTCTGAGATACATAGAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::: RE_033 TAGCGAACGAGTCTAGTCTTCCTCGACAAGGCTCTTTGACACTTCCAGCTCCGCTTTGTAGGAAGACTGTTGATGAGGTTTGGTCTGATATACATAGAGG 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT2G36 TGGTGGTAGCGGTAATGGAGGAGACAGCAATGGACGTAGTAGTAGTAGTAATGGACAGAACAATGCTCAGAACGGCGGTGAGACTGCGGCTAGACAACCG :::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_033 TGGTGGTAGCGGTAATGGAGGAGACAGCAATGGACGTATTAGTAGTAGTAATGGACAGAACAATGCTCAGAACGGCGGTGAGACTGCGGCTAGACAACCG 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT2G36 ACTTTTGGAGAGATGACACTTGAGGATTTCTTGGTGAAGGCTGGTGTGGTTAGAGAACATCCCACTAATCCTAAACCTAATCCAAACCCGAACCAAAACC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_033 ACTTTTGGAGAGATGACACTTGAGGATTTCTTGGTGAAGGCTGGTGTGGTTAGAGAACATCCCACTAATCCTAAACCTAATCCAAACCCGAACCAAAACC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT2G36 AAAACCCGTCTAGTGTAATACCCGCAGCTGCACAGCAACAGCTTTATGGTGTGTTTCAAGGAACCGGTGATCCTTCATTCCCGGGTCAAGCTATGGGTGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_033 AAAACCCGTCTAGTGTAATACCCGCAGCTGCACAGCAACAGCTTTATGGTGTGTTTCAAGGAACCGGTGATCCTTCATTCCCGGGTCAAGCTATGGGTGT 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT2G36 GGGTGACCCATCAGGTTATGCTAAAAGGACAGGAGGAGGAGGGTATCAGCAGGCGCCACCAGTTCAGGCAGGTGTTTGCTATGGAGGTGGCGTTGGGTTT ::::::::::::: :::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::: RE_033 GGGTGACCCATCATGTTATGCTAAAAGGACAGGAGGAGGAGGGTATCAACAGGCGCCACCAGTTCAGGCAGGTGTTTGCTATGGAGGTGGCGTTGGGTTT 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT2G36 GGAGCGGGTGGACAGCAAATGGGAATGGTTGGACCGTTAAGCCCGGTGTCTTCAGATGGATTAGGACATGGACAAGTGGATAACATAGGAGGTCAGTATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_033 GGAGCGGGTGGACAGCAAATGGGAATGGTTGGACCGTTAAGCCCGGTGTCTTCAGATGGATTAGGACATGGACAAGTGGATAACATAGGAGGTCAGTATG 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT2G36 GAGTAGATATGGGAGGGCTAAGGGGAAGGAAAAGAGTAGTGGATGGTCCAGTGGAGAAAGTAGTGGAGAGAAGACAGAGGAGGATGATCAAGAACCGCGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_033 GAGTAGATATGGGAGGGCTAAGGGGAAGGAAAAGAGTAGTGGATGGTCCAGTGGAGAAAGTAGTGGAGAGAAGACAGAGGAGGATGATCAAGAACCGCGA 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 AT2G36 GTCTGCTGCTAGATCTAGAGCAAGAAAACAAGCATATACAGTGGAATTGGAAGCTGAACTTAACCAGTTGAAAGAAGAGAATGCGCAGCTAAAACATGCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_033 GTCTGCTGCTAGATCTAGAGCAAGAAAACAAGCATATACAGTGGAATTGGAAGCTGAACTTAACCAGTTGAAAGAAGAGAATGCGCAGCTAAAACATGCA 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 AT2G36 TTGGCGGAGTTGGAGAGGAAGAGGAAGCAACAGTATTTTGAGAGTTTGAAGTCAAGGGCACAACCGAAATTGCCGAAATCGAACGGGAGATTGCGGACAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_033 TTGGCGGAGTTGGAGAGGAAGAGGAAGCAACAGTATTTTGAGAGTTTGAAGTCAAGGGCACAACCGAAATTGCCGAAATCGAACGGGAGATTGCGGACAT 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 AT2G36 TGATGAGGAACCCGAGTTGTCCACTC :::::::::::::::::::::::::: RE_033 TGATGAGGAACCCGAGTTGTCCACTC 1310 1320 10 20 30 40 50 60 70 80 90 100 AT2G36 MVTRETKLTSEREVESSMAQARHNGGGGGENHPFTSLGRQSSIYSLTLDEFQHALCENGKNFGSMNMDEFLVSIWNAEENNNNQQQAAAAAGSHSVPANH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_033 MVTRETKLTSEREVESSMAQARHNGGGGGENHPFTSLGRQSSIYSLTLDEFQHALCENGKNFGSMNMDEFLVSIWNAEENNNNQQQAAAAAGSHSVPANH 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G36 NGFNNNNNNGGEGGVGVFSGGSRGNEDANNKRGIANESSLPRQGSLTLPAPLCRKTVDEVWSEIHRGGGSGNGGDSNGRSSSSNGQNNAQNGGETAARQP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: :::::::::::::::::::: RE_033 NGFNNNNNNGGEGGVGVFSGGSRGNEDANNKRGIANESSLPRQGSLTLPAPLCRKTVDEVWSDIHRGGGSGNGGDSNGRISSSNGQNNAQNGGETAARQP 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G36 TFGEMTLEDFLVKAGVVREHPTNPKPNPNPNQNQNPSSVIPAAAQQQLYGVFQGTGDPSFPGQAMGVGDPSGYAKRTGGGGYQQAPPVQAGVCYGGGVGF ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: RE_033 TFGEMTLEDFLVKAGVVREHPTNPKPNPNPNQNQNPSSVIPAAAQQQLYGVFQGTGDPSFPGQAMGVGDPSCYAKRTGGGGYQQAPPVQAGVCYGGGVGF 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT2G36 GAGGQQMGMVGPLSPVSSDGLGHGQVDNIGGQYGVDMGGLRGRKRVVDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLKEENAQLKHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_033 GAGGQQMGMVGPLSPVSSDGLGHGQVDNIGGQYGVDMGGLRGRKRVVDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLKEENAQLKHA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 AT2G36 LAELERKRKQQYFESLKSRAQPKLPKSNGRLRTLMRNPSCPL :::::::::::::::::::::::::::::::::::::::::: RE_033 LAELERKRKQQYFESLKSRAQPKLPKSNGRLRTLMRNPSCPL 410 420 430 440

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