◆◆◆RE_0369 detail◆◆◆

Code name	RE_0369
Locus	AT5G28770
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列97.80%一致
comment	0530_third_0369_FR_55
sequence	>RE_0369_942bp ATGGAAAAAGTTTTCTCCGACGAAGAAATCTCCGGTAACCATCACTGGTCGGTTAATGGAATGACGTCGTTGAATCGCAGTGCTTCCGAATGGGCATTCA ATCGTTTCATACAAGAATCCTCCGCCGCTGCAGACGACGGAGAATCTACGACGGCGTGTGGTGTTTCCGTCTCCTCTCCTCCTAATGTTCCTGTAGATTC AGAGGAATACAGAGCATTTCTCAAGAGTAAACTTAATCTTGCTTGTGCTGCTGTCGCCATGAAAAGGGGAACTTTCATCAAACCTCAGGATACTTCTGGT AGATCTGACAATGGTGGAGCCAATGAATCAGAACAAGCCTCTCTTGCTTCTTCCAAAGCTACACCAATGATGAGCAGTGCTATAACAAGTGGATCTGAGC TCTCTGGTGATGAAGAAGAAGCTGATGGTGAAACTAATATGAACCCTACTAATGTTAAACGCGTTAAAAGGATGCTCTCTAATAGAGAATCAGCTAGACG GTCCAGAAGAAGAAAGCAAGCACACTTGAGTGAGCTAGAGACACAAGTTTCACAGCTTCGTGTAGAGAATTCAAAACTCATGAAGGGTCTCACTGATGTA ACTCAAACATTCAATGATGCATCTGTAGAAAACAGAGTTTTAAAAGCCAATATTGAGACACTACGAGCAAAGGTGAAAATGGCTGAAGAGACAGTGAAGA GACTCACTGGCTTTAACCCAATGTTCCACAATATGCCTCAGATTGTTTCAACTGTCTCTCTTCCTTCAGAGACATCAAATTCTCCAGACACTACAAGCAG CCAAGTGACTACACCAGAGATCATTAGCTCGGGGAACAAAGGCAAGGCCTTGATAGGGTGCAAGATGAACAGAACAGCTTCGATGCGTAGAGTTGAGAGC TTGGAACATCTGCAGAAACGTATTCGAAGCGTTGGGGATCAG >RE_0369_translated MEKVFSDEEISGNHHWSVNGMTSLNRSASEWAFNRFIQESSAAADDGESTTACGVSVSSPPNVPVDSEEYRAFLKSKLNLACAAVAMKRGTFIKPQDTSG RSDNGGANESEQASLASSKATPMMSSAITSGSELSGDEEEADGETNMNPTNVKRVKRMLSNRESARRSRRRKQAHLSELETQVSQLRVENSKLMKGLTDV TQTFNDASVENRVLKANIETLRAKVKMAEETVKRLTGFNPMFHNMPQIVSTVSLPSETSNSPDTTSSQVTTPEIISSGNKGKALIGCKMNRTASMRRVES LEHLQKRIRSVGDQ
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 921/942 (97.8%)（アミノ酸配列で307/314 (97.8%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT5G28 ATGGAAAAAGTTTTCTCCGACGAAGAAATCTCCGGTAACCATCACTGGTCGGTTAATGGAATGACGTCGTTGAATCGCAGTGCTTCCGAATGGGCATTCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_036 ATGGAAAAAGTTTTCTCCGACGAAGAAATCTCCGGTAACCATCACTGGTCGGTTAATGGAATGACGTCGTTGAATCGCAGTGCTTCCGAATGGGCATTCA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G28 ATCGTTTCATACAAGAATCCTCCGCCGCTGCAGACGACGGAGAATCTACGACGGCGTGTGGTGTTTCCGTCTCCTCTCCTCCTAATGTTCCTGTAGATTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_036 ATCGTTTCATACAAGAATCCTCCGCCGCTGCAGACGACGGAGAATCTACGACGGCGTGTGGTGTTTCCGTCTCCTCTCCTCCTAATGTTCCTGTAGATTC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 AT5G28 AGAGGAATACAGAGCATTTCTCAAGAGTAAACTTAATCTTGCTTGTGCTGCTGTCGCCATGAAAAG---------------------GGATACTTCTGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::: RE_036 AGAGGAATACAGAGCATTTCTCAAGAGTAAACTTAATCTTGCTTGTGCTGCTGTCGCCATGAAAAGGGGAACTTTCATCAAACCTCAGGATACTTCTGGT 210 220 230 240 250 260 270 280 290 300 280 290 300 310 320 330 340 350 360 370 AT5G28 AGATCTGACAATGGTGGAGCCAATGAATCAGAACAAGCCTCTCTTGCTTCTTCCAAAGCTACACCAATGATGAGCAGTGCTATAACAAGTGGATCTGAGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_036 AGATCTGACAATGGTGGAGCCAATGAATCAGAACAAGCCTCTCTTGCTTCTTCCAAAGCTACACCAATGATGAGCAGTGCTATAACAAGTGGATCTGAGC 310 320 330 340 350 360 370 380 390 400 380 390 400 410 420 430 440 450 460 470 AT5G28 TCTCTGGTGATGAAGAAGAAGCTGATGGTGAAACTAATATGAACCCTACTAATGTTAAACGCGTTAAAAGGATGCTCTCTAATAGAGAATCAGCTAGACG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_036 TCTCTGGTGATGAAGAAGAAGCTGATGGTGAAACTAATATGAACCCTACTAATGTTAAACGCGTTAAAAGGATGCTCTCTAATAGAGAATCAGCTAGACG 410 420 430 440 450 460 470 480 490 500 480 490 500 510 520 530 540 550 560 570 AT5G28 GTCCAGAAGAAGAAAGCAAGCACACTTGAGTGAGCTAGAGACACAAGTTTCACAGCTTCGTGTAGAGAATTCAAAACTCATGAAGGGTCTCACTGATGTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_036 GTCCAGAAGAAGAAAGCAAGCACACTTGAGTGAGCTAGAGACACAAGTTTCACAGCTTCGTGTAGAGAATTCAAAACTCATGAAGGGTCTCACTGATGTA 510 520 530 540 550 560 570 580 590 600 580 590 600 610 620 630 640 650 660 670 AT5G28 ACTCAAACATTCAATGATGCATCTGTAGAAAACAGAGTTTTAAAAGCCAATATTGAGACACTACGAGCAAAGGTGAAAATGGCTGAAGAGACAGTGAAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_036 ACTCAAACATTCAATGATGCATCTGTAGAAAACAGAGTTTTAAAAGCCAATATTGAGACACTACGAGCAAAGGTGAAAATGGCTGAAGAGACAGTGAAGA 610 620 630 640 650 660 670 680 690 700 680 690 700 710 720 730 740 750 760 770 AT5G28 GACTCACTGGCTTTAACCCAATGTTCCACAATATGCCTCAGATTGTTTCAACTGTCTCTCTTCCTTCAGAGACATCAAATTCTCCAGACACTACAAGCAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_036 GACTCACTGGCTTTAACCCAATGTTCCACAATATGCCTCAGATTGTTTCAACTGTCTCTCTTCCTTCAGAGACATCAAATTCTCCAGACACTACAAGCAG 710 720 730 740 750 760 770 780 790 800 780 790 800 810 820 830 840 850 860 870 AT5G28 CCAAGTGACTACACCAGAGATCATTAGCTCGGGGAACAAAGGCAAGGCCTTGATAGGGTGCAAGATGAACAGAACAGCTTCGATGCGTAGAGTTGAGAGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_036 CCAAGTGACTACACCAGAGATCATTAGCTCGGGGAACAAAGGCAAGGCCTTGATAGGGTGCAAGATGAACAGAACAGCTTCGATGCGTAGAGTTGAGAGC 810 820 830 840 850 860 870 880 890 900 880 890 900 910 920 AT5G28 TTGGAACATCTGCAGAAACGTATTCGAAGCGTTGGGGATCAG :::::::::::::::::::::::::::::::::::::::::: RE_036 TTGGAACATCTGCAGAAACGTATTCGAAGCGTTGGGGATCAG 910 920 930 940 10 20 30 40 50 60 70 80 90 AT5G28 MEKVFSDEEISGNHHWSVNGMTSLNRSASEWAFNRFIQESSAAADDGESTTACGVSVSSPPNVPVDSEEYRAFLKSKLNLACAAVAMKR-------DTSG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::: RE_036 MEKVFSDEEISGNHHWSVNGMTSLNRSASEWAFNRFIQESSAAADDGESTTACGVSVSSPPNVPVDSEEYRAFLKSKLNLACAAVAMKRGTFIKPQDTSG 10 20 30 40 50 60 70 80 90 100 100 110 120 130 140 150 160 170 180 190 AT5G28 RSDNGGANESEQASLASSKATPMMSSAITSGSELSGDEEEADGETNMNPTNVKRVKRMLSNRESARRSRRRKQAHLSELETQVSQLRVENSKLMKGLTDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_036 RSDNGGANESEQASLASSKATPMMSSAITSGSELSGDEEEADGETNMNPTNVKRVKRMLSNRESARRSRRRKQAHLSELETQVSQLRVENSKLMKGLTDV 110 120 130 140 150 160 170 180 190 200 200 210 220 230 240 250 260 270 280 290 AT5G28 TQTFNDASVENRVLKANIETLRAKVKMAEETVKRLTGFNPMFHNMPQIVSTVSLPSETSNSPDTTSSQVTTPEIISSGNKGKALIGCKMNRTASMRRVES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_036 TQTFNDASVENRVLKANIETLRAKVKMAEETVKRLTGFNPMFHNMPQIVSTVSLPSETSNSPDTTSSQVTTPEIISSGNKGKALIGCKMNRTASMRRVES 210 220 230 240 250 260 270 280 290 300 300 AT5G28 LEHLQKRIRSVGDQ :::::::::::::: RE_036 LEHLQKRIRSVGDQ 310

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