| Code name | RE_03D03 | |||
|---|---|---|---|---|
| Locus | AT3G23030 | |||
| Forward primer | ||||
| Reverse primer | ||||
| Alignment with TAIR7CDS | アミノ酸配列100%一致 | |||
| comment | ||||
| sequence |
>RE_03D03_522bp ATGGCGTACGAGAAAGTCAACGAGCTTAACCTTAAGGACACAGAGCTATGTCTTGGATTACCCGGAAGAACAGAGAAGATCAAAGAAGAACAAGAGGTTT CTTGCGTTAAAAGTAACAACAAGCGTCTATTTGAGGAAACTCGTGATGAAGAAGAATCTACACCTCCTACCAAAACTCAAATCGTTGGTTGGCCACCAGT GAGATCCTCCCGTAAGAACAACAACAGTGTGAGCTACGTGAAAGTGAGTATGGACGGAGCTCCTTACCTTCGCAAGATCGATCTCAAGACATACAAAAAC TACCCCGAGCTTCTCAAAGCGTTAGAGAATATGTTCAAAGTCATGATTGGTGAATATTGTGAGAGAGAAGGATACAAAGGATCTGGATTTGTACCAACAT ACGAAGATAAAGATGGTGACTGGATGTTGGTTGGTGATGTTCCATGGGACATGTTCTCTTCTTCTTGTAAGAGACTCAGAATCATGAAGGGATCCGACGC TCCTGCTCTAGACTCTTCCTTA >RE_03D03_translated MAYEKVNELNLKDTELCLGLPGRTEKIKEEQEVSCVKSNNKRLFEETRDEEESTPPTKTQIVGWPPVRSSRKNNNSVSYVKVSMDGAPYLRKIDLKTYKN YPELLKALENMFKVMIGEYCEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSDAPALDSSL |
|||
| Alignment |
◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 521/522 (99.8%)（アミノ酸配列で100%）一致しました。
10 20 30 40 50 60 70 80 90 100
AT3G23 ATGGCGTACGAGAAAGTCAACGAGCTTAACCTTAAGGACACAGAGCTATGTCTTGGATTACCCGGAAGAACAGAGAAGATCAAAGAAGAACAAGAGGTTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03D ATGGCGTACGAGAAAGTCAACGAGCTTAACCTTAAGGACACAGAGCTATGTCTTGGATTACCCGGAAGAACAGAGAAGATCAAAGAAGAACAAGAGGTTT
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT3G23 CTTGCGTTAAAAGTAACAACAAGCGTCTATTTGAGGAAACTCGTGATGAAGAAGAATCTACACCTCCTACCAAAACTCAAATCGTTGGTTGGCCACCAGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03D CTTGCGTTAAAAGTAACAACAAGCGTCTATTTGAGGAAACTCGTGATGAAGAAGAATCTACACCTCCTACCAAAACTCAAATCGTTGGTTGGCCACCAGT
110 120 130 140 150 160 170 180 190 200
210 220 230 240 250 260 270 280 290 300
AT3G23 GAGATCTTCCCGTAAGAACAACAACAGTGTGAGCTACGTGAAAGTGAGTATGGACGGAGCTCCTTACCTTCGCAAGATCGATCTCAAGACATACAAAAAC
:::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03D GAGATCCTCCCGTAAGAACAACAACAGTGTGAGCTACGTGAAAGTGAGTATGGACGGAGCTCCTTACCTTCGCAAGATCGATCTCAAGACATACAAAAAC
210 220 230 240 250 260 270 280 290 300
310 320 330 340 350 360 370 380 390 400
AT3G23 TACCCCGAGCTTCTCAAAGCGTTAGAGAATATGTTCAAAGTCATGATTGGTGAATATTGTGAGAGAGAAGGATACAAAGGATCTGGATTTGTACCAACAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03D TACCCCGAGCTTCTCAAAGCGTTAGAGAATATGTTCAAAGTCATGATTGGTGAATATTGTGAGAGAGAAGGATACAAAGGATCTGGATTTGTACCAACAT
310 320 330 340 350 360 370 380 390 400
410 420 430 440 450 460 470 480 490 500
AT3G23 ACGAAGATAAAGATGGTGACTGGATGTTGGTTGGTGATGTTCCATGGGACATGTTCTCTTCTTCTTGTAAGAGACTCAGAATCATGAAGGGATCCGACGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03D ACGAAGATAAAGATGGTGACTGGATGTTGGTTGGTGATGTTCCATGGGACATGTTCTCTTCTTCTTGTAAGAGACTCAGAATCATGAAGGGATCCGACGC
410 420 430 440 450 460 470 480 490 500
510 520
AT3G23 TCCTGCTCTAGACTCTTCCTTA
::::::::::::::::::::::
RE_03D TCCTGCTCTAGACTCTTCCTTA
510 520
10 20 30 40 50 60 70 80 90 100
AT3G23 MAYEKVNELNLKDTELCLGLPGRTEKIKEEQEVSCVKSNNKRLFEETRDEEESTPPTKTQIVGWPPVRSSRKNNNSVSYVKVSMDGAPYLRKIDLKTYKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03D MAYEKVNELNLKDTELCLGLPGRTEKIKEEQEVSCVKSNNKRLFEETRDEEESTPPTKTQIVGWPPVRSSRKNNNSVSYVKVSMDGAPYLRKIDLKTYKN
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170
AT3G23 YPELLKALENMFKVMIGEYCEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSDAPALDSSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03D YPELLKALENMFKVMIGEYCEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSDAPALDSSL
110 120 130 140 150 160 170
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