◆◆◆RE_03D07 detail◆◆◆

Code name	RE_03D07
Locus	AT5G04840
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment
sequence	>RE_03D07_921bp ATGTCAAGGCCTGCTCCGCTTCCACCTCGTTGCCCGATTCCAAAGAAACTTTCTTTGAGTCCAGTTGCAGATACATTCTACTCTTCTTCCTCACCCATTG AATCATACATTGGTCAATACAAGTCTTCTACTCAAGATTCCAGGCTCGAAGATCAACCTGCTTGGCTTGATGAGTTGCTCTGTGACAAAACTGATGGGTT GCTCACTAGAGGAGGTCCTCTGCGCCGCTCAGCTAGCGACTCAGTTGTGCTTTTGGGAGACATTTCTGCTACTTTTTCTGGTTTTGATCAAAGTGAGGAT GAAGAAAGTTTGAGTTCTGAAGCTTGTGGGGACTTGGAGTCTGCCTGTGTATATGGTCCCAACTCGCCAAGAGCAAAGAACAACTCTAGCTTCTCTAACA ACCCTATTGCTTCTGCCTTTTCGGATTATGGTTCTCAGACACCGCCTCAGAACTTGGATGATACGGTGAAAGGGATCAACCGTTCACCTGTTGCTGAAAA TGCGTGTGGTTCAATGGGCATACCAAATGCAAAAAGGAACCCGGGACAGCGTTCAAGGGTTCGTAAGCTCCAGTACATTGCTGAACTTGAGAGAACAGTA GGCATGTTGCAGACGGTGGAAGCAGATTTATCAGTGAGAGTGGCTTCACTTCTTCAGACACGAGCAACACTGTCCCTGGAGAATAGCCAGTTGAAGCAGC AGATGGCGATACTAAAGCAGGACAAGCTCATAAGGGAAGGTGAGTATCAGTTACTGAAGAAGGAAGCTCAGAGATTGAAATCTGGATTGGGATACTTAGG GAGCACTAACAACAGTAACAGGCTGGTGAGGTCATATTCTGCTGGTTCAAATGTAGCTCCAAGGACAGCTTCGTCCCACTTGGACTGGAATTTGCTAGAT CTGACCAAACTCAATCTCAAC >RE_03D07_translated MSRPAPLPPRCPIPKKLSLSPVADTFYSSSSPIESYIGQYKSSTQDSRLEDQPAWLDELLCDKTDGLLTRGGPLRRSASDSVVLLGDISATFSGFDQSED EESLSSEACGDLESACVYGPNSPRAKNNSSFSNNPIASAFSDYGSQTPPQNLDDTVKGINRSPVAENACGSMGIPNAKRNPGQRSRVRKLQYIAELERTV GMLQTVEADLSVRVASLLQTRATLSLENSQLKQQMAILKQDKLIREGEYQLLKKEAQRLKSGLGYLGSTNNSNRLVRSYSAGSNVAPRTASSHLDWNLLD LTKLNLN
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 920/921 (99.9%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT5G04 ATGTCAAGGCCTGCTCCGCTTCCACCTCGTTGCCCGATTCCAAAGAAACTTTCTTTGAGTCCAGTTGCAGATACATTCTACTCTTCTTCCTCACCCATTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D ATGTCAAGGCCTGCTCCGCTTCCACCTCGTTGCCCGATTCCAAAGAAACTTTCTTTGAGTCCAGTTGCAGATACATTCTACTCTTCTTCCTCACCCATTG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G04 AATCATACATTGGTCAATACAAGTCTTCTACTCAAGATTCCAGGCTCGAAGATCAACCTGCTTGGCTTGATGAGTTGCTCTGTGACAAAACTGATGGGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D AATCATACATTGGTCAATACAAGTCTTCTACTCAAGATTCCAGGCTCGAAGATCAACCTGCTTGGCTTGATGAGTTGCTCTGTGACAAAACTGATGGGTT 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G04 GCTCACTAGAGGAGGTCCTCTGCGCCGCTCAGCTAGCGACTCAGTTGTGCTTTTGGGAGACATTTCTGCTACTTTTTCTGGTTTTGATCAAAGTGAGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D GCTCACTAGAGGAGGTCCTCTGCGCCGCTCAGCTAGCGACTCAGTTGTGCTTTTGGGAGACATTTCTGCTACTTTTTCTGGTTTTGATCAAAGTGAGGAT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT5G04 GAAGAAAGTTTGAGTTCTGAAGCTTGTGGGGACTTGGAGTCTGCTTGTGTATATGGTCCCAACTCGCCAAGAGCAAAGAACAACTCTAGCTTCTCTAACA :::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D GAAGAAAGTTTGAGTTCTGAAGCTTGTGGGGACTTGGAGTCTGCCTGTGTATATGGTCCCAACTCGCCAAGAGCAAAGAACAACTCTAGCTTCTCTAACA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT5G04 ACCCTATTGCTTCTGCCTTTTCGGATTATGGTTCTCAGACACCGCCTCAGAACTTGGATGATACGGTGAAAGGGATCAACCGTTCACCTGTTGCTGAAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D ACCCTATTGCTTCTGCCTTTTCGGATTATGGTTCTCAGACACCGCCTCAGAACTTGGATGATACGGTGAAAGGGATCAACCGTTCACCTGTTGCTGAAAA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT5G04 TGCGTGTGGTTCAATGGGCATACCAAATGCAAAAAGGAACCCGGGACAGCGTTCAAGGGTTCGTAAGCTCCAGTACATTGCTGAACTTGAGAGAACAGTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D TGCGTGTGGTTCAATGGGCATACCAAATGCAAAAAGGAACCCGGGACAGCGTTCAAGGGTTCGTAAGCTCCAGTACATTGCTGAACTTGAGAGAACAGTA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT5G04 GGCATGTTGCAGACGGTGGAAGCAGATTTATCAGTGAGAGTGGCTTCACTTCTTCAGACACGAGCAACACTGTCCCTGGAGAATAGCCAGTTGAAGCAGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D GGCATGTTGCAGACGGTGGAAGCAGATTTATCAGTGAGAGTGGCTTCACTTCTTCAGACACGAGCAACACTGTCCCTGGAGAATAGCCAGTTGAAGCAGC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT5G04 AGATGGCGATACTAAAGCAGGACAAGCTCATAAGGGAAGGTGAGTATCAGTTACTGAAGAAGGAAGCTCAGAGATTGAAATCTGGATTGGGATACTTAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D AGATGGCGATACTAAAGCAGGACAAGCTCATAAGGGAAGGTGAGTATCAGTTACTGAAGAAGGAAGCTCAGAGATTGAAATCTGGATTGGGATACTTAGG 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT5G04 GAGCACTAACAACAGTAACAGGCTGGTGAGGTCATATTCTGCTGGTTCAAATGTAGCTCCAAGGACAGCTTCGTCCCACTTGGACTGGAATTTGCTAGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D GAGCACTAACAACAGTAACAGGCTGGTGAGGTCATATTCTGCTGGTTCAAATGTAGCTCCAAGGACAGCTTCGTCCCACTTGGACTGGAATTTGCTAGAT 810 820 830 840 850 860 870 880 890 900 910 920 AT5G04 CTGACCAAACTCAATCTCAAC ::::::::::::::::::::: RE_03D CTGACCAAACTCAATCTCAAC 910 920 10 20 30 40 50 60 70 80 90 100 AT5G04 MSRPAPLPPRCPIPKKLSLSPVADTFYSSSSPIESYIGQYKSSTQDSRLEDQPAWLDELLCDKTDGLLTRGGPLRRSASDSVVLLGDISATFSGFDQSED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D MSRPAPLPPRCPIPKKLSLSPVADTFYSSSSPIESYIGQYKSSTQDSRLEDQPAWLDELLCDKTDGLLTRGGPLRRSASDSVVLLGDISATFSGFDQSED 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G04 EESLSSEACGDLESACVYGPNSPRAKNNSSFSNNPIASAFSDYGSQTPPQNLDDTVKGINRSPVAENACGSMGIPNAKRNPGQRSRVRKLQYIAELERTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D EESLSSEACGDLESACVYGPNSPRAKNNSSFSNNPIASAFSDYGSQTPPQNLDDTVKGINRSPVAENACGSMGIPNAKRNPGQRSRVRKLQYIAELERTV 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G04 GMLQTVEADLSVRVASLLQTRATLSLENSQLKQQMAILKQDKLIREGEYQLLKKEAQRLKSGLGYLGSTNNSNRLVRSYSAGSNVAPRTASSHLDWNLLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D GMLQTVEADLSVRVASLLQTRATLSLENSQLKQQMAILKQDKLIREGEYQLLKKEAQRLKSGLGYLGSTNNSNRLVRSYSAGSNVAPRTASSHLDWNLLD 210 220 230 240 250 260 270 280 290 300 AT5G04 LTKLNLN ::::::: RE_03D LTKLNLN

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