◆◆◆RE_03D10 detail◆◆◆

Code name	RE_03D10
Locus	AT1G72050
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment
sequence	>RE_03D10_972bp ATGTTTGAGAGATCTTTTACTTGCTATGTGGATGATTGTGCTGCTAGCTATAGGAGGAAGGATCATCTCAATAGGCATCTTCTTACACATAAAGGGAAGC TCTTTAAGTGTCCGAAGGAGAACTGCAAGAGTGAATTCTCAGTACAGGGAAATGTTGGTAGGCATGTTAAGAAATATCATAGTAATGACAACCGTGATAA GGACAATACTGGTTTGGGCGATGGTGATAAGGACAATACTTGTAAGGGGGATGATGATAAGGAAAAATCTGGTAGTGGCGGTTGTGAGAAGGAAAATGAA GGGAATGGCGGAAGTGGTAAGGACAATAATGGTAATGGCGATTCTCAGCCTGCGGAGTGTTCAACTGGTCAGAAGCAGGTTGTCTGCAAAGAAATTGGTT GTGGAAAAGCCTTTAAGTATCCTTCGCAGCTTCAAAAGCATCAGGATTCTCATGTGAAATTAGACTCTGTGGAGGCATTTTGTTCCGAGCCTGGGTGTAT GAAGTACTTTACCAACGAAGAATGCCTCAAGTCACACATAAGATCCTGTCATCAGCACATCAACTGTGAGATATGTGGTTCTAAGCATTTGAAAAAGAAC ATCAAGAGACATCTACGGACTCATGATGAAGATTCCTCACCAGGAGAAATCAAGTGTGAAGTTGAGGGTTGCTCTTCGACTTTCTCCAAGGCTTCTAATC TTCAGAAACACATGAAAGCAGTGCACGATGATATACGTCCCTTTGTCTGTGGCTTTCCCGGTTGTGGCATGAGATTTGCTTACAAACATGTCAGAAACAA GCACGAGAATTCCGGGTATCACGTATATACCTGCGGTGATTTTGTCGAAACTGATGAAGATTTCACTTCAAGACCGAGAGGTGGACTAAAGAGGAAACAA GTTACTGCGGAAATGCTGGTACGAAAGAGAGTCATGCCTCCTCGGTTTGATGCAGAAGAACACGAAACTTGC >RE_03D10_translated MFERSFTCYVDDCAASYRRKDHLNRHLLTHKGKLFKCPKENCKSEFSVQGNVGRHVKKYHSNDNRDKDNTGLGDGDKDNTCKGDDDKEKSGSGGCEKENE GNGGSGKDNNGNGDSQPAECSTGQKQVVCKEIGCGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQHINCEICGSKHLKKN IKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKHENSGYHVYTCGDFVETDEDFTSRPRGGLKRKQ VTAEMLVRKRVMPPRFDAEEHETC
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 971/972 (99.9%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G72 ATGTTTGAGAGATCTTTTACTTGCTATGTGGATGATTGTGCTGCTAGCTATAGGAGGAAGGATCATCTCAATAGGCATCTTCTTACACATAAAGGGAAGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D ATGTTTGAGAGATCTTTTACTTGCTATGTGGATGATTGTGCTGCTAGCTATAGGAGGAAGGATCATCTCAATAGGCATCTTCTTACACATAAAGGGAAGC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G72 TCTTTAAGTGTCCGAAGGAGAACTGCAAGAGTGAATTCTCAGTACAGGGAAATGTTGGTAGGCATGTTAAGAAATATCATAGTAATGACAACCGTGATAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D TCTTTAAGTGTCCGAAGGAGAACTGCAAGAGTGAATTCTCAGTACAGGGAAATGTTGGTAGGCATGTTAAGAAATATCATAGTAATGACAACCGTGATAA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G72 GGACAATACTGGTTTGGGCGATGGTGATAAGGACAATACTTGTAAGGGGGATGATGATAAGGAAAAATCTGGTAGTGGCGGTTGTGAGAAGGAAAATGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D GGACAATACTGGTTTGGGCGATGGTGATAAGGACAATACTTGTAAGGGGGATGATGATAAGGAAAAATCTGGTAGTGGCGGTTGTGAGAAGGAAAATGAA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G72 GGGAATGGCGGAAGTGGTAAGGACAATAATGGTAATGGCGATTCTCAGCCTGCGGAGTGTTCAACTGGTCAGAAGCAGGTTGTCTGCAAAGAAATTGGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D GGGAATGGCGGAAGTGGTAAGGACAATAATGGTAATGGCGATTCTCAGCCTGCGGAGTGTTCAACTGGTCAGAAGCAGGTTGTCTGCAAAGAAATTGGTT 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G72 GTGGAAAAGCCTTTAAGTATCCTTCACAGCTTCAAAAGCATCAGGATTCTCATGTGAAATTAGACTCTGTGGAGGCATTTTGTTCCGAGCCTGGGTGTAT ::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D GTGGAAAAGCCTTTAAGTATCCTTCGCAGCTTCAAAAGCATCAGGATTCTCATGTGAAATTAGACTCTGTGGAGGCATTTTGTTCCGAGCCTGGGTGTAT 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G72 GAAGTACTTTACCAACGAAGAATGCCTCAAGTCACACATAAGATCCTGTCATCAGCACATCAACTGTGAGATATGTGGTTCTAAGCATTTGAAAAAGAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D GAAGTACTTTACCAACGAAGAATGCCTCAAGTCACACATAAGATCCTGTCATCAGCACATCAACTGTGAGATATGTGGTTCTAAGCATTTGAAAAAGAAC 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G72 ATCAAGAGACATCTACGGACTCATGATGAAGATTCCTCACCAGGAGAAATCAAGTGTGAAGTTGAGGGTTGCTCTTCGACTTTCTCCAAGGCTTCTAATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D ATCAAGAGACATCTACGGACTCATGATGAAGATTCCTCACCAGGAGAAATCAAGTGTGAAGTTGAGGGTTGCTCTTCGACTTTCTCCAAGGCTTCTAATC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G72 TTCAGAAACACATGAAAGCAGTGCACGATGATATACGTCCCTTTGTCTGTGGCTTTCCCGGTTGTGGCATGAGATTTGCTTACAAACATGTCAGAAACAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D TTCAGAAACACATGAAAGCAGTGCACGATGATATACGTCCCTTTGTCTGTGGCTTTCCCGGTTGTGGCATGAGATTTGCTTACAAACATGTCAGAAACAA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G72 GCACGAGAATTCCGGGTATCACGTATATACCTGCGGTGATTTTGTCGAAACTGATGAAGATTTCACTTCAAGACCGAGAGGTGGACTAAAGAGGAAACAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D GCACGAGAATTCCGGGTATCACGTATATACCTGCGGTGATTTTGTCGAAACTGATGAAGATTTCACTTCAAGACCGAGAGGTGGACTAAAGAGGAAACAA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 AT1G72 GTTACTGCGGAAATGCTGGTACGAAAGAGAGTCATGCCTCCTCGGTTTGATGCAGAAGAACACGAAACTTGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D GTTACTGCGGAAATGCTGGTACGAAAGAGAGTCATGCCTCCTCGGTTTGATGCAGAAGAACACGAAACTTGC 910 920 930 940 950 960 970 10 20 30 40 50 60 70 80 90 100 AT1G72 MFERSFTCYVDDCAASYRRKDHLNRHLLTHKGKLFKCPKENCKSEFSVQGNVGRHVKKYHSNDNRDKDNTGLGDGDKDNTCKGDDDKEKSGSGGCEKENE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D MFERSFTCYVDDCAASYRRKDHLNRHLLTHKGKLFKCPKENCKSEFSVQGNVGRHVKKYHSNDNRDKDNTGLGDGDKDNTCKGDDDKEKSGSGGCEKENE 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G72 GNGGSGKDNNGNGDSQPAECSTGQKQVVCKEIGCGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQHINCEICGSKHLKKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D GNGGSGKDNNGNGDSQPAECSTGQKQVVCKEIGCGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQHINCEICGSKHLKKN 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G72 IKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKHENSGYHVYTCGDFVETDEDFTSRPRGGLKRKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D IKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKHENSGYHVYTCGDFVETDEDFTSRPRGGLKRKQ 210 220 230 240 250 260 270 280 290 300 310 320 AT1G72 VTAEMLVRKRVMPPRFDAEEHETC :::::::::::::::::::::::: RE_03D VTAEMLVRKRVMPPRFDAEEHETC 310 320

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