Code name | RE_03D11 | |||
---|---|---|---|---|
Locus | AT2G37430 | |||
Forward primer | ||||
Reverse primer | ||||
Alignment with TAIR7CDS | アミノ酸配列100%一致 | |||
comment | ||||
sequence |
>RE_03D11_534bp ATGAAGAGAGAAAGATCTGATTTCGAAGAATCCCTCAAGAATATTGACATTGCTAAATGTCTGATGATACTAGCACAAACCTCCATGGTCAAACAGATCG GTTTGAACCAACATACCGAGAGCCATACAAGCAACCAATTCGAATGCAAAACATGTAACAAGAGATTTTCTTCGTTTCAAGCCCTTGGTGGCCACCGGGC AAGCCATAAGAAGCCAAAGCTCACCGTTGAGCAGAAAGATGTGAAACATCTTAGCAACGATTATAAAGGAAATCATTTTCACAAGTGTTCCATATGCAGT CAGAGTTTTGGGACCGGACAGGCTTTAGGTGGTCACATGAGACGGCATAGGTCAAGCATGACGGTCGAGCCATCGTTCATCTCTCCGATGATTCCATCCA TGCCGGTTTTGAAACGGTGCGGTAGTAGTAAGAGGATTTTGAGTTTGGATTTGAATCTGACTCCGTTAGAGAATGATCTTGAATATATCTTTGGGAAGAC ATTTGTCCCAAAAATAGATATGAAGTTCGTTCTT >RE_03D11_translated MKRERSDFEESLKNIDIAKCLMILAQTSMVKQIGLNQHTESHTSNQFECKTCNKRFSSFQALGGHRASHKKPKLTVEQKDVKHLSNDYKGNHFHKCSICS QSFGTGQALGGHMRRHRSSMTVEPSFISPMIPSMPVLKRCGSSKRILSLDLNLTPLENDLEYIFGKTFVPKIDMKFVL |
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Alignment |
◆CDS(TAIRver.9)_without_stop_codonとのalignment◆ 533/534 (99.8%)(アミノ酸配列で100%)一致しました。 10 20 30 40 50 60 70 80 90 100 AT2G37 ATGAAGAGAGAAAGATCTGATTTCGAAGAATCCCTCAAGAATATTGACATTGCTAAATGTCTGATGATACTAGCACAAACCTCCATGGTCAAACAGATCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D ATGAAGAGAGAAAGATCTGATTTCGAAGAATCCCTCAAGAATATTGACATTGCTAAATGTCTGATGATACTAGCACAAACCTCCATGGTCAAACAGATCG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G37 GTTTGAACCAACATACCGAGAGCCATACAAGCAACCAATTCGAATGCAAAACATGTAACAAGAGATTTTCTTCGTTTCAAGCCCTTGGTGGCCACCGGGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D GTTTGAACCAACATACCGAGAGCCATACAAGCAACCAATTCGAATGCAAAACATGTAACAAGAGATTTTCTTCGTTTCAAGCCCTTGGTGGCCACCGGGC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G37 AAGCCATAAGAAGCCAAAGCTCACCGTTGAGCAGAAAGATGTGAAACATCTTAGCAACGATTATAAAGGAAATCATTTTCACAAGTGTTCCATATGCAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D AAGCCATAAGAAGCCAAAGCTCACCGTTGAGCAGAAAGATGTGAAACATCTTAGCAACGATTATAAAGGAAATCATTTTCACAAGTGTTCCATATGCAGT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT2G37 CAGAGTTTTGGGACCGGACAGGCTTTAGGTGGTCACATGAGACGGCATAGGTCAAGCATGACGGTCGAGCCATCGTTCATCTCTCCGATGATTCCATCCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D CAGAGTTTTGGGACCGGACAGGCTTTAGGTGGTCACATGAGACGGCATAGGTCAAGCATGACGGTCGAGCCATCGTTCATCTCTCCGATGATTCCATCCA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT2G37 TGCCGGTTTTGAAACGATGCGGTAGTAGTAAGAGGATTTTGAGTTTGGATTTGAATCTGACTCCGTTAGAGAATGATCTTGAATATATCTTTGGGAAGAC :::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D TGCCGGTTTTGAAACGGTGCGGTAGTAGTAAGAGGATTTTGAGTTTGGATTTGAATCTGACTCCGTTAGAGAATGATCTTGAATATATCTTTGGGAAGAC 410 420 430 440 450 460 470 480 490 500 510 520 530 AT2G37 ATTTGTCCCAAAAATAGATATGAAGTTCGTTCTT :::::::::::::::::::::::::::::::::: RE_03D ATTTGTCCCAAAAATAGATATGAAGTTCGTTCTT 510 520 530 10 20 30 40 50 60 70 80 90 100 AT2G37 MKRERSDFEESLKNIDIAKCLMILAQTSMVKQIGLNQHTESHTSNQFECKTCNKRFSSFQALGGHRASHKKPKLTVEQKDVKHLSNDYKGNHFHKCSICS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D MKRERSDFEESLKNIDIAKCLMILAQTSMVKQIGLNQHTESHTSNQFECKTCNKRFSSFQALGGHRASHKKPKLTVEQKDVKHLSNDYKGNHFHKCSICS 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 AT2G37 QSFGTGQALGGHMRRHRSSMTVEPSFISPMIPSMPVLKRCGSSKRILSLDLNLTPLENDLEYIFGKTFVPKIDMKFVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03D QSFGTGQALGGHMRRHRSSMTVEPSFISPMIPSMPVLKRCGSSKRILSLDLNLTPLENDLEYIFGKTFVPKIDMKFVL 110 120 130 140 150 160 170 |