| Code name | RE_03E01 | |||
|---|---|---|---|---|
| Locus | AT4G35700 | |||
| Forward primer | ||||
| Reverse primer | ||||
| Alignment with TAIR7CDS | アミノ酸配列100%一致 | |||
| comment | ||||
| sequence |
>RE_03E01_825bp ATGAGTAATCCCGAGAAGTCTAAAATTGCTGAGGAAGAGAATGAGAATTTTGACGAGAGTGATTATCTTTGGAGCGATGAAGAAGGAGACATACGTGAAA TTGTTCTTGGCCTTCCTGCACTAAGACTTAGTGAGAGTCTCAATGTGGATGAAAGCATCCGTAACGAAGCCGTTTCCGCGGCGAAGTTGATCGTGGCAGC CGCCAAGGAAGCCACAGGGAATACAGAACAAAGTGCTAGTGGTACCGGTGACGTTAGTGGAACTCCAGAAATCATAAAAGTTGGGAAACCCCGTGTATTA TTGGAAGCGCTGGCCGAAGCATCTGGTTGTACCCCTATTGGGGTGACCACTACTGAAGGAGAGGTAGTCAAGAAACCCCGTAAGAAAGGTTCTACTCAGT TGACACATCTGCCGCAAGGCCCTCCTATGTGTAATGTTTGTGGGAAGGGCTTTGCTTCTTGGAAGGCTGTTTTTGGGCATCTAAGGCAGCATAAGGATCG AGGGTATCTAGGTTTTCTTCCTCCGCCAACATTCAATGCTGCTGAGGAAGGATTTGGTGGAGTTGCTACTGCTTCAACCGGTGGTGCAGTAGCCACTGCT ATTTCCGTTGGTGAAGTCCCTACTGCTTCTTCCGCTGGTGGACTCGCTACGGCTTCTTCCGATGGTGAAGGGCTTGTTTCAAGTATCGGAAGGGCGAGGA TTGACTTAAATGCCGATCCAGTCGAGGAGGAAGACAAGGTAATTGGAGTTGGATCTAAGCGAAAATTTGATCTGAATAGGTCCCCCCCACCAGACGGTGA TGAAGAGAACGATGATAAAGTCGAG >RE_03E01_translated MSNPEKSKIAEEENENFDESDYLWSDEEGDIREIVLGLPALRLSESLNVDESIRNEAVSAAKLIVAAAKEATGNTEQSASGTGDVSGTPEIIKVGKPRVL LEALAEASGCTPIGVTTTEGEVVKKPRKKGSTQLTHLPQGPPMCNVCGKGFASWKAVFGHLRQHKDRGYLGFLPPPTFNAAEEGFGGVATASTGGAVATA ISVGEVPTASSAGGLATASSDGEGLVSSIGRARIDLNADPVEEEDKVIGVGSKRKFDLNRSPPPDGDEENDDKVE |
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| Alignment |
◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 824/825 (99.9%)（アミノ酸配列で100%）一致しました。
10 20 30 40 50 60 70 80 90 100
AT4G35 ATGAGTAATCCCGAGAAGTCTAAAATTGCTGAGGAAGAGAATGAGAATTTTGACGAGAGTGATTATCTTTGGAGCGATGAAGAAGGAGACATACGTGAAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E ATGAGTAATCCCGAGAAGTCTAAAATTGCTGAGGAAGAGAATGAGAATTTTGACGAGAGTGATTATCTTTGGAGCGATGAAGAAGGAGACATACGTGAAA
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT4G35 TTGTTCTTGGCCTTCCTGCACTAAGACTTAGTGAGAGTCTCAATGTGGATGAAAGCATCCGTAACGAAGCCGTTTCCGCGGCGAAGTTGATCGTGGCAGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E TTGTTCTTGGCCTTCCTGCACTAAGACTTAGTGAGAGTCTCAATGTGGATGAAAGCATCCGTAACGAAGCCGTTTCCGCGGCGAAGTTGATCGTGGCAGC
110 120 130 140 150 160 170 180 190 200
210 220 230 240 250 260 270 280 290 300
AT4G35 CGCCAAGGAAGCCACAGGGAATACAGAACAAAGTGCTAGTGGTACCGGTGACGTTAGTGGAACTCCAGAAATCATAAAAGTTGGGAAACCCCGTGTATTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E CGCCAAGGAAGCCACAGGGAATACAGAACAAAGTGCTAGTGGTACCGGTGACGTTAGTGGAACTCCAGAAATCATAAAAGTTGGGAAACCCCGTGTATTA
210 220 230 240 250 260 270 280 290 300
310 320 330 340 350 360 370 380 390 400
AT4G35 TTGGAAGCGCTGGCCGAAGCATCTGGTTGTACCCCTATTGGGGTGACCACTACTGAAGGAGAGGTAGTCAAGAAACCCCGTAAGAAAGGTTCTACTCAGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E TTGGAAGCGCTGGCCGAAGCATCTGGTTGTACCCCTATTGGGGTGACCACTACTGAAGGAGAGGTAGTCAAGAAACCCCGTAAGAAAGGTTCTACTCAGT
310 320 330 340 350 360 370 380 390 400
410 420 430 440 450 460 470 480 490 500
AT4G35 TGACACATCTGCCGCAAGGCCCTCCTATGTGTAATGTTTGTGGGAAGGGCTTTGCTTCTTGGAAGGCTGTTTTTGGACATCTAAGGCAGCATAAGGATCG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
RE_03E TGACACATCTGCCGCAAGGCCCTCCTATGTGTAATGTTTGTGGGAAGGGCTTTGCTTCTTGGAAGGCTGTTTTTGGGCATCTAAGGCAGCATAAGGATCG
410 420 430 440 450 460 470 480 490 500
510 520 530 540 550 560 570 580 590 600
AT4G35 AGGGTATCTAGGTTTTCTTCCTCCGCCAACATTCAATGCTGCTGAGGAAGGATTTGGTGGAGTTGCTACTGCTTCAACCGGTGGTGCAGTAGCCACTGCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E AGGGTATCTAGGTTTTCTTCCTCCGCCAACATTCAATGCTGCTGAGGAAGGATTTGGTGGAGTTGCTACTGCTTCAACCGGTGGTGCAGTAGCCACTGCT
510 520 530 540 550 560 570 580 590 600
610 620 630 640 650 660 670 680 690 700
AT4G35 ATTTCCGTTGGTGAAGTCCCTACTGCTTCTTCCGCTGGTGGACTCGCTACGGCTTCTTCCGATGGTGAAGGGCTTGTTTCAAGTATCGGAAGGGCGAGGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E ATTTCCGTTGGTGAAGTCCCTACTGCTTCTTCCGCTGGTGGACTCGCTACGGCTTCTTCCGATGGTGAAGGGCTTGTTTCAAGTATCGGAAGGGCGAGGA
610 620 630 640 650 660 670 680 690 700
710 720 730 740 750 760 770 780 790 800
AT4G35 TTGACTTAAATGCCGATCCAGTCGAGGAGGAAGACAAGGTAATTGGAGTTGGATCTAAGCGAAAATTTGATCTGAATAGGTCCCCCCCACCAGACGGTGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E TTGACTTAAATGCCGATCCAGTCGAGGAGGAAGACAAGGTAATTGGAGTTGGATCTAAGCGAAAATTTGATCTGAATAGGTCCCCCCCACCAGACGGTGA
710 720 730 740 750 760 770 780 790 800
810 820
AT4G35 TGAAGAGAACGATGATAAAGTCGAG
:::::::::::::::::::::::::
RE_03E TGAAGAGAACGATGATAAAGTCGAG
810 820
10 20 30 40 50 60 70 80 90 100
AT4G35 MSNPEKSKIAEEENENFDESDYLWSDEEGDIREIVLGLPALRLSESLNVDESIRNEAVSAAKLIVAAAKEATGNTEQSASGTGDVSGTPEIIKVGKPRVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E MSNPEKSKIAEEENENFDESDYLWSDEEGDIREIVLGLPALRLSESLNVDESIRNEAVSAAKLIVAAAKEATGNTEQSASGTGDVSGTPEIIKVGKPRVL
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT4G35 LEALAEASGCTPIGVTTTEGEVVKKPRKKGSTQLTHLPQGPPMCNVCGKGFASWKAVFGHLRQHKDRGYLGFLPPPTFNAAEEGFGGVATASTGGAVATA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E LEALAEASGCTPIGVTTTEGEVVKKPRKKGSTQLTHLPQGPPMCNVCGKGFASWKAVFGHLRQHKDRGYLGFLPPPTFNAAEEGFGGVATASTGGAVATA
110 120 130 140 150 160 170 180 190 200
210 220 230 240 250 260 270
AT4G35 ISVGEVPTASSAGGLATASSDGEGLVSSIGRARIDLNADPVEEEDKVIGVGSKRKFDLNRSPPPDGDEENDDKVE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E ISVGEVPTASSAGGLATASSDGEGLVSSIGRARIDLNADPVEEEDKVIGVGSKRKFDLNRSPPPDGDEENDDKVE
210 220 230 240 250 260 270
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