◆◆◆RE_03E03 detail◆◆◆

Code name	RE_03E03
Locus	AT3G51080
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment
sequence	>RE_03E03_936bp ATGGAGAGTGTTGAATTGACGTTGAAGAACAGTAACATGAAAGACAAAACCCTAACCGGCGGCGCTCAAAATGGCGATGATTTCTCCGTCGACGACTTGC TTGACTTCTCAAAAGAAGAAGAAGACGACGACGTTTTGGTTGAGGATGAGGCTGAATTGAAAGTACAACGAAAAAGAGGAGTCTCTGACGAAAATACCCT TCACCGGAGCAACGATTTCTCCACCGCTGACTTCCACACTAGCGGGCTTTCCGTTCCGATGGATGATATAGCGGAACTTGAATGGTTATCAAATTTCGTA GATGATTCTTCTTTCACGCCGTATTCTGCTCCGACGAATAAACCGGTTTGGTTAACCGGAAATCGGAGACATCTTGTACAACCGGTTAAAGAGGAGACCT GCTTCAAATCCCAACATCCGGCCGTCAAAACCAGACCCAAACGAGCCAGAACCGGAGTCAGAGTCTGGTCTCATGGTTCGCAGTCGTTAACCGACTCATC TTCAAGCTCTACAACATCTTCGTCGTCCTCTCCTCGTCCTTCAAGCCCTCTATGGCTCGCCAGCGGTCAGTTTCTTGATGAGCCAATGACTAAAACACAA AAGAAGAAGAAAGTTTGGAAAAACGCTGGTCAGACGCAAACGCAAACGCAGACGCAGACGCGGCAGTGTGGTCATTGTGGAGTTCAGAAAACGCCGCAGT GGAGAGCAGGACCATTAGGAGCGAAGACGTTGTGTAATGCGTGTGGTGTGCGTTACAAATCGGGTCGGTTACTACCCGAATATAGACCCGCTTGTAGCCC AACATTTTCGAGTGAGCTTCACTCAAACCACCACAGTAAAGTCATTGAGATGCGTAGGAAGAAAGAGACTTCTGACGGTGCTGAAGAAACCGGTTTGAAC CAGCCGGTTCAGACGGTTCAGGTTGTCTCGAGTTTT >RE_03E03_translated MESVELTLKNSNMKDKTLTGGAQNGDDFSVDDLLDFSKEEEDDDVLVEDEAELKVQRKRGVSDENTLHRSNDFSTADFHTSGLSVPMDDIAELEWLSNFV DDSSFTPYSAPTNKPVWLTGNRRHLVQPVKEETCFKSQHPAVKTRPKRARTGVRVWSHGSQSLTDSSSSSTTSSSSSPRPSSPLWLASGQFLDEPMTKTQ KKKKVWKNAGQTQTQTQTQTRQCGHCGVQKTPQWRAGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHSKVIEMRRKKETSDGAEETGLN QPVQTVQVVSSF
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 935/936 (99.9%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT3G51 ATGGAGAGTGTTGAATTGACGTTGAAGAACAGTAACATGAAAGACAAAACCCTAACCGGCGGCGCTCAAAATGGCGATGATTTCTCCGTCGACGACTTGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03E ATGGAGAGTGTTGAATTGACGTTGAAGAACAGTAACATGAAAGACAAAACCCTAACCGGCGGCGCTCAAAATGGCGATGATTTCTCCGTCGACGACTTGC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G51 TTGACTTCTCAAAAGAAGAAGAAGACGACGACGTTTTGGTTGAGGATGAGGCTGAATTGAAAGTACAACGAAAAAGAGGAGTCTCTGACGAAAATACCCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03E TTGACTTCTCAAAAGAAGAAGAAGACGACGACGTTTTGGTTGAGGATGAGGCTGAATTGAAAGTACAACGAAAAAGAGGAGTCTCTGACGAAAATACCCT 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G51 TCACCGGAGCAACGATTTCTCCACCGCTGATTTCCACACTAGCGGGCTTTCCGTTCCGATGGATGATATAGCGGAACTTGAATGGTTATCAAATTTCGTA :::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03E TCACCGGAGCAACGATTTCTCCACCGCTGACTTCCACACTAGCGGGCTTTCCGTTCCGATGGATGATATAGCGGAACTTGAATGGTTATCAAATTTCGTA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT3G51 GATGATTCTTCTTTCACGCCGTATTCTGCTCCGACGAATAAACCGGTTTGGTTAACCGGAAATCGGAGACATCTTGTACAACCGGTTAAAGAGGAGACCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03E GATGATTCTTCTTTCACGCCGTATTCTGCTCCGACGAATAAACCGGTTTGGTTAACCGGAAATCGGAGACATCTTGTACAACCGGTTAAAGAGGAGACCT 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT3G51 GCTTCAAATCCCAACATCCGGCCGTCAAAACCAGACCCAAACGAGCCAGAACCGGAGTCAGAGTCTGGTCTCATGGTTCGCAGTCGTTAACCGACTCATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03E GCTTCAAATCCCAACATCCGGCCGTCAAAACCAGACCCAAACGAGCCAGAACCGGAGTCAGAGTCTGGTCTCATGGTTCGCAGTCGTTAACCGACTCATC 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT3G51 TTCAAGCTCTACAACATCTTCGTCGTCCTCTCCTCGTCCTTCAAGCCCTCTATGGCTCGCCAGCGGTCAGTTTCTTGATGAGCCAATGACTAAAACACAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03E TTCAAGCTCTACAACATCTTCGTCGTCCTCTCCTCGTCCTTCAAGCCCTCTATGGCTCGCCAGCGGTCAGTTTCTTGATGAGCCAATGACTAAAACACAA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT3G51 AAGAAGAAGAAAGTTTGGAAAAACGCTGGTCAGACGCAAACGCAAACGCAGACGCAGACGCGGCAGTGTGGTCATTGTGGAGTTCAGAAAACGCCGCAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03E AAGAAGAAGAAAGTTTGGAAAAACGCTGGTCAGACGCAAACGCAAACGCAGACGCAGACGCGGCAGTGTGGTCATTGTGGAGTTCAGAAAACGCCGCAGT 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT3G51 GGAGAGCAGGACCATTAGGAGCGAAGACGTTGTGTAATGCGTGTGGTGTGCGTTACAAATCGGGTCGGTTACTACCCGAATATAGACCCGCTTGTAGCCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03E GGAGAGCAGGACCATTAGGAGCGAAGACGTTGTGTAATGCGTGTGGTGTGCGTTACAAATCGGGTCGGTTACTACCCGAATATAGACCCGCTTGTAGCCC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT3G51 AACATTTTCGAGTGAGCTTCACTCAAACCACCACAGTAAAGTCATTGAGATGCGTAGGAAGAAAGAGACTTCTGACGGTGCTGAAGAAACCGGTTTGAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03E AACATTTTCGAGTGAGCTTCACTCAAACCACCACAGTAAAGTCATTGAGATGCGTAGGAAGAAAGAGACTTCTGACGGTGCTGAAGAAACCGGTTTGAAC 810 820 830 840 850 860 870 880 890 900 910 920 930 AT3G51 CAGCCGGTTCAGACGGTTCAGGTTGTCTCGAGTTTT :::::::::::::::::::::::::::::::::::: RE_03E CAGCCGGTTCAGACGGTTCAGGTTGTCTCGAGTTTT 910 920 930 10 20 30 40 50 60 70 80 90 100 AT3G51 MESVELTLKNSNMKDKTLTGGAQNGDDFSVDDLLDFSKEEEDDDVLVEDEAELKVQRKRGVSDENTLHRSNDFSTADFHTSGLSVPMDDIAELEWLSNFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03E MESVELTLKNSNMKDKTLTGGAQNGDDFSVDDLLDFSKEEEDDDVLVEDEAELKVQRKRGVSDENTLHRSNDFSTADFHTSGLSVPMDDIAELEWLSNFV 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G51 DDSSFTPYSAPTNKPVWLTGNRRHLVQPVKEETCFKSQHPAVKTRPKRARTGVRVWSHGSQSLTDSSSSSTTSSSSSPRPSSPLWLASGQFLDEPMTKTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03E DDSSFTPYSAPTNKPVWLTGNRRHLVQPVKEETCFKSQHPAVKTRPKRARTGVRVWSHGSQSLTDSSSSSTTSSSSSPRPSSPLWLASGQFLDEPMTKTQ 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G51 KKKKVWKNAGQTQTQTQTQTRQCGHCGVQKTPQWRAGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHSKVIEMRRKKETSDGAEETGLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03E KKKKVWKNAGQTQTQTQTQTRQCGHCGVQKTPQWRAGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHSKVIEMRRKKETSDGAEETGLN 210 220 230 240 250 260 270 280 290 300 310 AT3G51 QPVQTVQVVSSF :::::::::::: RE_03E QPVQTVQVVSSF 310

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