| Code name | RE_03E05 | |||
|---|---|---|---|---|
| Locus | AT1G26960 | |||
| Forward primer | ||||
| Reverse primer | ||||
| Alignment with TAIR7CDS | アミノ酸配列100%一致 | |||
| comment | ||||
| sequence |
>RE_03E05_765bp ATGTCTTGTAATAATAATGGCTTAGCTTTCTTCCCTGAAAATTTCAGTCTCCAAAACCATCACCAAGAAGAAGAAGATCACCCTCAACTTCTTCAAGACT TCCATGGGTTTCTAGGTAAAAGATCTCCAATGAACAACGTGCAAGGGTTTTGTAATCTAGATATGAACGGAGATGAAGAATATTCAGACGATGGATCTAA GATGGGAGAGAAGAAGAGGAGATTGAACATGGAACAATTGAAGGCACTAGAGAAGGACTTTGAGCTTGGTAATAAACTTGAATCAGATCGAAAATTAGAG CTAGCTCGTGCCTTGGGATTGCAGCCTAGACAAATTGCTATATGGTTCCAAAACAGAAGAGCTCGATCCAAAACCAAGCAGCTTGAGAAAGACTATGACA TGCTTAAGCGTCAATTCGAAAGTCTCAGAGATGAGAACGAAGTTCTTCAAACTCAAAATCAAAAGCTTCAAGCTCAGGTAATGGCATTGAAAAGCAGAGA ACCAATAGAATCAATCAATCTGAACAAAGAAACAGAAGGATCATGTAGTGACAGAAGTGAGAACATTTCTGGTGACATCAGGCCACCGGAGATCGATAGC CAATTCGCCCTAGGCCATCCACCGACAACTACAACGATGCAGTTTTTTCAGAATTCATCGTCAGAACAGAGAATGGTGAAAGAAGAGAACAGTATCAGTA ACATGTTCTGTGGAATTGATGACCAGTCTGGGTTCTGGCCATGGCTTGACCAGCAACAATACAAT >RE_03E05_translated MSCNNNGLAFFPENFSLQNHHQEEEDHPQLLQDFHGFLGKRSPMNNVQGFCNLDMNGDEEYSDDGSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLE LARALGLQPRQIAIWFQNRRARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQVMALKSREPIESINLNKETEGSCSDRSENISGDIRPPEIDS QFALGHPPTTTTMQFFQNSSSEQRMVKEENSISNMFCGIDDQSGFWPWLDQQQYN |
|||
| Alignment |
◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 764/765 (99.9%)（アミノ酸配列で100%）一致しました。
10 20 30 40 50 60 70 80 90 100
AT1G26 ATGTCTTGTAATAATAATGGCTTAGCTTTCTTCCCTGAAAATTTCAGTCTCCAAAACCATCACCAAGAAGAAGAAGATCACCCTCAACTTCTTCAAGACT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E ATGTCTTGTAATAATAATGGCTTAGCTTTCTTCCCTGAAAATTTCAGTCTCCAAAACCATCACCAAGAAGAAGAAGATCACCCTCAACTTCTTCAAGACT
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT1G26 TCCATGGGTTTCTAGGTAAAAGATCTCCAATGAACAACGTGCAAGGGTTTTGTAATCTAGATATGAACGGAGATGAAGAATATTCAGACGATGGATCTAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E TCCATGGGTTTCTAGGTAAAAGATCTCCAATGAACAACGTGCAAGGGTTTTGTAATCTAGATATGAACGGAGATGAAGAATATTCAGACGATGGATCTAA
110 120 130 140 150 160 170 180 190 200
210 220 230 240 250 260 270 280 290 300
AT1G26 GATGGGAGAGAAGAAGAGGAGATTGAACATGGAACAATTGAAGGCACTAGAGAAGGACTTTGAGCTTGGTAATAAACTTGAATCAGATCGAAAATTAGAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E GATGGGAGAGAAGAAGAGGAGATTGAACATGGAACAATTGAAGGCACTAGAGAAGGACTTTGAGCTTGGTAATAAACTTGAATCAGATCGAAAATTAGAG
210 220 230 240 250 260 270 280 290 300
310 320 330 340 350 360 370 380 390 400
AT1G26 CTAGCTCGTGCCTTGGGATTGCAACCTAGACAAATTGCTATATGGTTCCAAAACAGAAGAGCTCGATCCAAAACCAAGCAGCTTGAGAAAGACTATGACA
::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E CTAGCTCGTGCCTTGGGATTGCAGCCTAGACAAATTGCTATATGGTTCCAAAACAGAAGAGCTCGATCCAAAACCAAGCAGCTTGAGAAAGACTATGACA
310 320 330 340 350 360 370 380 390 400
410 420 430 440 450 460 470 480 490 500
AT1G26 TGCTTAAGCGTCAATTCGAAAGTCTCAGAGATGAGAACGAAGTTCTTCAAACTCAAAATCAAAAGCTTCAAGCTCAGGTAATGGCATTGAAAAGCAGAGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E TGCTTAAGCGTCAATTCGAAAGTCTCAGAGATGAGAACGAAGTTCTTCAAACTCAAAATCAAAAGCTTCAAGCTCAGGTAATGGCATTGAAAAGCAGAGA
410 420 430 440 450 460 470 480 490 500
510 520 530 540 550 560 570 580 590 600
AT1G26 ACCAATAGAATCAATCAATCTGAACAAAGAAACAGAAGGATCATGTAGTGACAGAAGTGAGAACATTTCTGGTGACATCAGGCCACCGGAGATCGATAGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E ACCAATAGAATCAATCAATCTGAACAAAGAAACAGAAGGATCATGTAGTGACAGAAGTGAGAACATTTCTGGTGACATCAGGCCACCGGAGATCGATAGC
510 520 530 540 550 560 570 580 590 600
610 620 630 640 650 660 670 680 690 700
AT1G26 CAATTCGCCCTAGGCCATCCACCGACAACTACAACGATGCAGTTTTTTCAGAATTCATCGTCAGAACAGAGAATGGTGAAAGAAGAGAACAGTATCAGTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E CAATTCGCCCTAGGCCATCCACCGACAACTACAACGATGCAGTTTTTTCAGAATTCATCGTCAGAACAGAGAATGGTGAAAGAAGAGAACAGTATCAGTA
610 620 630 640 650 660 670 680 690 700
710 720 730 740 750 760
AT1G26 ACATGTTCTGTGGAATTGATGACCAGTCTGGGTTCTGGCCATGGCTTGACCAGCAACAATACAAT
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E ACATGTTCTGTGGAATTGATGACCAGTCTGGGTTCTGGCCATGGCTTGACCAGCAACAATACAAT
710 720 730 740 750 760
10 20 30 40 50 60 70 80 90 100
AT1G26 MSCNNNGLAFFPENFSLQNHHQEEEDHPQLLQDFHGFLGKRSPMNNVQGFCNLDMNGDEEYSDDGSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E MSCNNNGLAFFPENFSLQNHHQEEEDHPQLLQDFHGFLGKRSPMNNVQGFCNLDMNGDEEYSDDGSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLE
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT1G26 LARALGLQPRQIAIWFQNRRARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQVMALKSREPIESINLNKETEGSCSDRSENISGDIRPPEIDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E LARALGLQPRQIAIWFQNRRARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQVMALKSREPIESINLNKETEGSCSDRSENISGDIRPPEIDS
110 120 130 140 150 160 170 180 190 200
210 220 230 240 250
AT1G26 QFALGHPPTTTTMQFFQNSSSEQRMVKEENSISNMFCGIDDQSGFWPWLDQQQYN
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E QFALGHPPTTTTMQFFQNSSSEQRMVKEENSISNMFCGIDDQSGFWPWLDQQQYN
210 220 230 240 250
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