| Code name | RE_03E08 | |||
|---|---|---|---|---|
| Locus | AT2G37060 | |||
| Forward primer | ||||
| Reverse primer | ||||
| Alignment with TAIR7CDS | アミノ酸配列100%一致 | |||
| comment | AT2G37060.3(=.1)_by_RIKE読まれた配列に有N | |||
| sequence |
>RE_03E08_519bp ATGGCGGAGTCGCAGGCCAAGAGTCCCGGAGGCTGTGGAAGCCATGAGAGTGGTGGAGATCAAAGTCCCAGGTCGTTACATGTTCGTGAGCAAGATAGGT TTCTTCCGATTGCTAACATAAGCCGTATCATGAAAAGAGGTCTTCCTGCTAATGGGAAAATCGCTAAAGATGCTAAGGAGATTGTGCAGGAATGTGTCTC TGAATTCATCAGTTTCGTCACCAGCGAAGCGAGTGATAAATGTCAAAGAGAGAAAAGGAAGACTATTAATGGAGATGATTTGCTTTGGGCAATGGCTACT TTAGGATTTGAAGACTACATGGAACCTCTCAAGGTTTACCTGATGAGATATAGAGAGATGGAGGGTGACACAAAGGGATCAGCAAAAGGTGGGGATCCAA ATGCAAAGAAAGATGGGCAATCAAGCCAAAATGGCCAGTTCTCGCAGCTTGCTCACCAAGGTCCTTATGGGAACTCTCAAGCTCAGCAACATATGATGGT TCCAATGCCGGGAACAGAC >RE_03E08_translated MAESQAKSPGGCGSHESGGDQSPRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMAT LGFEDYMEPLKVYLMRYREMEGDTKGSAKGGDPNAKKDGQSSQNGQFSQLAHQGPYGNSQAQQHMMVPMPGTD |
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| Alignment |
◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 518/519 (99.8%)（アミノ酸配列で100%）一致しました。
10 20 30 40 50 60 70 80 90 100
AT2G37 ATGGCGGAGTCGCAGGCCAAGAGTCCCGGAGGCTGTGGAAGCCATGAGAGTGGTGGAGATCAAAGTCCCAGGTCGTTACATGTTCGTGAGCAAGATAGGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E ATGGCGGAGTCGCAGGCCAAGAGTCCCGGAGGCTGTGGAAGCCATGAGAGTGGTGGAGATCAAAGTCCCAGGTCGTTACATGTTCGTGAGCAAGATAGGT
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT2G37 TTCTTCCGATTGCTAACATAAGCCGTATCATGAAAAGAGGTCTTCCTGCTAATGGGAAAATCGCTAAAGATGCTAAGGAGATTGTGCAGGAATGTGTCTC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E TTCTTCCGATTGCTAACATAAGCCGTATCATGAAAAGAGGTCTTCCTGCTAATGGGAAAATCGCTAAAGATGCTAAGGAGATTGTGCAGGAATGTGTCTC
110 120 130 140 150 160 170 180 190 200
210 220 230 240 250 260 270 280 290 300
AT2G37 TGAATTCATCAGTTTCGTCACCAGCGAAGCGAGTGATAAATGTCAAAGAGAGAAAAGGAAGACTATTAATGGAGATGATTTGCTTTGGGCAATGGCTACT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E TGAATTCATCAGTTTCGTCACCAGCGAAGCGAGTGATAAATGTCAAAGAGAGAAAAGGAAGACTATTAATGGAGATGATTTGCTTTGGGCAATGGCTACT
210 220 230 240 250 260 270 280 290 300
310 320 330 340 350 360 370 380 390 400
AT2G37 TTAGGATTTGAAGACTACATGGAACCTCTCAAGGTTTACCTGATGAGATATAGAGAGATGGAGGGTGACACAAAGGGATCAGCAAAAGGTGGGGATCCAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E TTAGGATTTGAAGACTACATGGAACCTCTCAAGGTTTACCTGATGAGATATAGAGAGATGGAGGGTGACACAAAGGGATCAGCAAAAGGTGGGGATCCAA
310 320 330 340 350 360 370 380 390 400
410 420 430 440 450 460 470 480 490 500
AT2G37 ATGCAAAGAAAGATGGGCAATCAAGCCAAAATGGCCAGTTCTCGCAGCTTGCTCACCAAGGTCCTTATGGGAACTCTCAAGCTCAGCAGCATATGATGGT
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::
RE_03E ATGCAAAGAAAGATGGGCAATCAAGCCAAAATGGCCAGTTCTCGCAGCTTGCTCACCAAGGTCCTTATGGGAACTCTCAAGCTCAGCAACATATGATGGT
410 420 430 440 450 460 470 480 490 500
510
AT2G37 TCCAATGCCGGGAACAGAC
:::::::::::::::::::
RE_03E TCCAATGCCGGGAACAGAC
510
10 20 30 40 50 60 70 80 90 100
AT2G37 MAESQAKSPGGCGSHESGGDQSPRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E MAESQAKSPGGCGSHESGGDQSPRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMAT
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170
AT2G37 LGFEDYMEPLKVYLMRYREMEGDTKGSAKGGDPNAKKDGQSSQNGQFSQLAHQGPYGNSQAQQHMMVPMPGTD
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03E LGFEDYMEPLKVYLMRYREMEGDTKGSAKGGDPNAKKDGQSSQNGQFSQLAHQGPYGNSQAQQHMMVPMPGTD
110 120 130 140 150 160 170
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