| Code name | RE_03F03 | |||
|---|---|---|---|---|
| Locus | AT1G68320 | |||
| Forward primer | ||||
| Reverse primer | ||||
| Alignment with TAIR7CDS | アミノ酸配列100%一致 | |||
| comment | ||||
| sequence |
>RE_03F03_858bp ATGGAAAATTCGATGAAGAAGAAGAAGAGCTTCAAAGAAAGTGAAGATGAAGAACTAAGAAGAGGGCCTTGGACTTTGGAGGAAGACACACTTCTCACAA ATTACATCCTCCATAACGGTGAGGGTCGTTGGAATCACGTCGCCAAATGTGCTGGGCTAAAGAGAACTGGGAAAAGTTGTAGATTGAGATGGTTGAATTA CTTGAAACCCGACATAAGACGAGGGAATCTTACTCCTCAAGAACAGCTTTTGATCCTTGAGCTTCACTCTAAATGGGGTAATAGGTGGTCCAAGATTGCA CAGTACTTGCCAGGAAGAACGGATAACGAGATCAAGAACTATTGGAGAACAAGAGTCCAAAAACAAGCTCGTCAACTCAACATCGAATCTAACAGCGACA AGTTCTTTGACGCTGTTCGTAGTTTTTGGGTCCCTAGATTGATCGAGAAGATGGAACAAAACTCATCCACTACTACTACTTATTGTTGTCCCCAAAACAA CAACAACAACTCTCTTCTTCTTCCTTCTCAATCTCACGACTCTTTAAGTATGCAAAAAGATATAGATTACTCGGGTTTCAGCAACATAGACGGTTCTTCT TCAACTTCTACTTGCATGTCTCATCTAACAACAGTTCCACACTTTATGGATCAAAGCAACACCAATATCATCGATGGCTCGATGTGTTTCCATGAAGGCA ATGTTCAAGAATTCGGAGGATATGTTCCTGGCATGGAGGATTACATGGTAAACTCGGACATCTCAATGGAATGTCACGTGGCGGATGGTTATTCAGCGTA CGAGGATGTTACACAAGATCCCATGTGGAATGTGGATGACATTTGGCAGTTTAGGGAG >RE_03F03_translated MENSMKKKKSFKESEDEELRRGPWTLEEDTLLTNYILHNGEGRWNHVAKCAGLKRTGKSCRLRWLNYLKPDIRRGNLTPQEQLLILELHSKWGNRWSKIA QYLPGRTDNEIKNYWRTRVQKQARQLNIESNSDKFFDAVRSFWVPRLIEKMEQNSSTTTTYCCPQNNNNNSLLLPSQSHDSLSMQKDIDYSGFSNIDGSS STSTCMSHLTTVPHFMDQSNTNIIDGSMCFHEGNVQEFGGYVPGMEDYMVNSDISMECHVADGYSAYEDVTQDPMWNVDDIWQFRE |
|||
| Alignment |
◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 857/858 (99.9%)（アミノ酸配列で100%）一致しました。
10 20 30 40 50 60 70 80 90 100
AT1G68 ATGGAAAATTCGATGAAGAAGAAGAAGAGCTTCAAAGAAAGTGAAGATGAAGAACTAAGAAGAGGGCCTTGGACTTTGGAGGAAGACACACTTCTCACAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03F ATGGAAAATTCGATGAAGAAGAAGAAGAGCTTCAAAGAAAGTGAAGATGAAGAACTAAGAAGAGGGCCTTGGACTTTGGAGGAAGACACACTTCTCACAA
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT1G68 ATTACATCCTCCATAACGGTGAGGGTCGTTGGAATCACGTCGCCAAATGTGCTGGGCTAAAGAGAACTGGGAAAAGTTGTAGATTGAGATGGTTGAATTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03F ATTACATCCTCCATAACGGTGAGGGTCGTTGGAATCACGTCGCCAAATGTGCTGGGCTAAAGAGAACTGGGAAAAGTTGTAGATTGAGATGGTTGAATTA
110 120 130 140 150 160 170 180 190 200
210 220 230 240 250 260 270 280 290 300
AT1G68 CTTGAAACCCGACATAAGACGAGGGAATCTTACTCCTCAAGAACAGCTTTTGATCCTTGAGCTTCACTCTAAATGGGGTAATAGGTGGTCCAAGATTGCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03F CTTGAAACCCGACATAAGACGAGGGAATCTTACTCCTCAAGAACAGCTTTTGATCCTTGAGCTTCACTCTAAATGGGGTAATAGGTGGTCCAAGATTGCA
210 220 230 240 250 260 270 280 290 300
310 320 330 340 350 360 370 380 390 400
AT1G68 CAGTACTTGCCAGGAAGAACGGATAACGAGATCAAGAACTATTGGAGAACAAGAGTTCAAAAACAAGCTCGTCAACTCAACATCGAATCTAACAGCGACA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::
RE_03F CAGTACTTGCCAGGAAGAACGGATAACGAGATCAAGAACTATTGGAGAACAAGAGTCCAAAAACAAGCTCGTCAACTCAACATCGAATCTAACAGCGACA
310 320 330 340 350 360 370 380 390 400
410 420 430 440 450 460 470 480 490 500
AT1G68 AGTTCTTTGACGCTGTTCGTAGTTTTTGGGTCCCTAGATTGATCGAGAAGATGGAACAAAACTCATCCACTACTACTACTTATTGTTGTCCCCAAAACAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03F AGTTCTTTGACGCTGTTCGTAGTTTTTGGGTCCCTAGATTGATCGAGAAGATGGAACAAAACTCATCCACTACTACTACTTATTGTTGTCCCCAAAACAA
410 420 430 440 450 460 470 480 490 500
510 520 530 540 550 560 570 580 590 600
AT1G68 CAACAACAACTCTCTTCTTCTTCCTTCTCAATCTCACGACTCTTTAAGTATGCAAAAAGATATAGATTACTCGGGTTTCAGCAACATAGACGGTTCTTCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03F CAACAACAACTCTCTTCTTCTTCCTTCTCAATCTCACGACTCTTTAAGTATGCAAAAAGATATAGATTACTCGGGTTTCAGCAACATAGACGGTTCTTCT
510 520 530 540 550 560 570 580 590 600
610 620 630 640 650 660 670 680 690 700
AT1G68 TCAACTTCTACTTGCATGTCTCATCTAACAACAGTTCCACACTTTATGGATCAAAGCAACACCAATATCATCGATGGCTCGATGTGTTTCCATGAAGGCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03F TCAACTTCTACTTGCATGTCTCATCTAACAACAGTTCCACACTTTATGGATCAAAGCAACACCAATATCATCGATGGCTCGATGTGTTTCCATGAAGGCA
610 620 630 640 650 660 670 680 690 700
710 720 730 740 750 760 770 780 790 800
AT1G68 ATGTTCAAGAATTCGGAGGATATGTTCCTGGCATGGAGGATTACATGGTAAACTCGGACATCTCAATGGAATGTCACGTGGCGGATGGTTATTCAGCGTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03F ATGTTCAAGAATTCGGAGGATATGTTCCTGGCATGGAGGATTACATGGTAAACTCGGACATCTCAATGGAATGTCACGTGGCGGATGGTTATTCAGCGTA
710 720 730 740 750 760 770 780 790 800
810 820 830 840 850
AT1G68 CGAGGATGTTACACAAGATCCCATGTGGAATGTGGATGACATTTGGCAGTTTAGGGAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03F CGAGGATGTTACACAAGATCCCATGTGGAATGTGGATGACATTTGGCAGTTTAGGGAG
810 820 830 840 850
10 20 30 40 50 60 70 80 90 100
AT1G68 MENSMKKKKSFKESEDEELRRGPWTLEEDTLLTNYILHNGEGRWNHVAKCAGLKRTGKSCRLRWLNYLKPDIRRGNLTPQEQLLILELHSKWGNRWSKIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03F MENSMKKKKSFKESEDEELRRGPWTLEEDTLLTNYILHNGEGRWNHVAKCAGLKRTGKSCRLRWLNYLKPDIRRGNLTPQEQLLILELHSKWGNRWSKIA
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT1G68 QYLPGRTDNEIKNYWRTRVQKQARQLNIESNSDKFFDAVRSFWVPRLIEKMEQNSSTTTTYCCPQNNNNNSLLLPSQSHDSLSMQKDIDYSGFSNIDGSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03F QYLPGRTDNEIKNYWRTRVQKQARQLNIESNSDKFFDAVRSFWVPRLIEKMEQNSSTTTTYCCPQNNNNNSLLLPSQSHDSLSMQKDIDYSGFSNIDGSS
110 120 130 140 150 160 170 180 190 200
210 220 230 240 250 260 270 280
AT1G68 STSTCMSHLTTVPHFMDQSNTNIIDGSMCFHEGNVQEFGGYVPGMEDYMVNSDISMECHVADGYSAYEDVTQDPMWNVDDIWQFRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03F STSTCMSHLTTVPHFMDQSNTNIIDGSMCFHEGNVQEFGGYVPGMEDYMVNSDISMECHVADGYSAYEDVTQDPMWNVDDIWQFRE
210 220 230 240 250 260 270 280
|
|||