| Code name | RE_03F08 | |||
|---|---|---|---|---|
| Locus | AT2G41130 | |||
| Forward primer | ||||
| Reverse primer | ||||
| Alignment with TAIR7CDS | アミノ酸配列99.60%一致 | |||
| comment | ||||
| sequence |
>RE_03F08_759bp ATGCAACCAGAGACCTCAGATCAGATGTTGTACTCGTTTCTTGCCGGAAACGAAGTCGGCGGTGGAGGGTACTGCGTCTCCGGCGACTACATGACGACTA TGCAGAGCTTATGTGGGTCTTCGTCGTCGACGTCATCGTATTACCCACTGGCGATCTCCGGCATCGGAGAAACGATGGCTCAAGACAGAGCTTTAGCTGC TTTGAGGAACCACAAAGAAGCTGAGAGAAGAAGGAGAGAGAGGATCAATTCTCATCTCAACAAGCTTCGTAACGTACTCTCTTGTAATTCTAAGACCGAT AAAGCCACACTGCTCGCCAAAGTAGTTCAACGAGTCAGAGAACTTAAACAGCAAACCCTAGAGACCTCCGACTCCGACCAAACATTATTACCATCAGAGA CCGACGAAATTAGTGTTCTACACTTTGGAGACTATTCAAACGACGGTCATATAATCTTCAAAGCCTCTCTATGTTGTGAAGATAGATCAGATCTCTTGCC GGACCTTATGGAGATTCTCAAGTCTCTTAACATGAAGACTCTCCGAGCTGAGATGGTAACCATTGGTGGTCGGACAAGAAGTGTTCTTGTCGTAGCTGCT GACAAAGAGATGCACGGCGTCGAGTCTGTGCATTTTTTGCAAAATGCTCTCAAGTCGCTGCTTGAGCGGTCAAGCAAGTCGTTGAAGGAACGTAGTTCTG GTGGTGGAGGAGGAGAACGGTCAAAGCGGCGTCGTGCGCTGGATCACATCATAATGGTG >RE_03F08_translated MQPETSDQMLYSFLAGNEVGGGGYCVSGDYMTTMQSLCGSSSSTSSYYPLAISGIGETMAQDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTD KATLLAKVVQRVRELKQQTLETSDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPDLMEILKSLNMKTLRAEMVTIGGRTRSVLVVAA DKEMHGVESVHFLQNALKSLLERSSKSLKERSSGGGGGERSKRRRALDHIIMV |
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| Alignment |
◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 758/759 (99.9%)（アミノ酸配列で252/253 (99.6%)）一致しました。
10 20 30 40 50 60 70 80 90 100
AT2G41 ATGCAACCAGAGACCTCAGATCAGATGTTGTACTCGTTTCTTGCCGGAAACGAAGTCGGCGGTGGAGGGTACTGCGTCTCCGGCGACTACATGACGACTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03F ATGCAACCAGAGACCTCAGATCAGATGTTGTACTCGTTTCTTGCCGGAAACGAAGTCGGCGGTGGAGGGTACTGCGTCTCCGGCGACTACATGACGACTA
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT2G41 TGCAGAGCTTATGTGGGTCTTCGTCGTCGACGTCATCGTATTACCCACTGGCGATCTCCGGCATCGGAGAAACGATGGCTCAAGACAGAGCTTTAGCTGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03F TGCAGAGCTTATGTGGGTCTTCGTCGTCGACGTCATCGTATTACCCACTGGCGATCTCCGGCATCGGAGAAACGATGGCTCAAGACAGAGCTTTAGCTGC
110 120 130 140 150 160 170 180 190 200
210 220 230 240 250 260 270 280 290 300
AT2G41 TTTGAGGAACCACAAAGAAGCTGAGAGAAGAAGGAGAGAGAGGATCAATTCTCATCTCAACAAGCTTCGTAACGTACTCTCTTGTAATTCTAAGACCGAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03F TTTGAGGAACCACAAAGAAGCTGAGAGAAGAAGGAGAGAGAGGATCAATTCTCATCTCAACAAGCTTCGTAACGTACTCTCTTGTAATTCTAAGACCGAT
210 220 230 240 250 260 270 280 290 300
310 320 330 340 350 360 370 380 390 400
AT2G41 AAAGCCACACTGCTCGCCAAAGTAGTTCAACGAGTCAGAGAACTTAAACAGCAAACCCTAGAGACCTCCGACTCCGACCAAACATTATTACCATCAGAGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03F AAAGCCACACTGCTCGCCAAAGTAGTTCAACGAGTCAGAGAACTTAAACAGCAAACCCTAGAGACCTCCGACTCCGACCAAACATTATTACCATCAGAGA
310 320 330 340 350 360 370 380 390 400
410 420 430 440 450 460 470 480 490 500
AT2G41 CCGACGAAATTAGTGTTCTACACTTTGGAGACTATTCAAACGACGGTCATATAATCTTCAAAGCCTCTCTATGTTGTGAAGATAGATCAGATCTCTTGCC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03F CCGACGAAATTAGTGTTCTACACTTTGGAGACTATTCAAACGACGGTCATATAATCTTCAAAGCCTCTCTATGTTGTGAAGATAGATCAGATCTCTTGCC
410 420 430 440 450 460 470 480 490 500
510 520 530 540 550 560 570 580 590 600
AT2G41 GGACCTTATGGAGATTCTCAAGTCTCTTAACATGAAGACTCTCCGAGCTGAGATGGTAACCATTGGTGGTCGGACAAGAAGTGTTCTTGTCGTAGCTGCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03F GGACCTTATGGAGATTCTCAAGTCTCTTAACATGAAGACTCTCCGAGCTGAGATGGTAACCATTGGTGGTCGGACAAGAAGTGTTCTTGTCGTAGCTGCT
510 520 530 540 550 560 570 580 590 600
610 620 630 640 650 660 670 680 690 700
AT2G41 GACAAAGAGATGCACGGCGTCGAGTCTGTGCATTTTTTGCAAAATGCTCTCAAGTCGCTGCTTGAGCGGTCAAGCAAGTCGTTGATGGAACGTAGTTCTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::
RE_03F GACAAAGAGATGCACGGCGTCGAGTCTGTGCATTTTTTGCAAAATGCTCTCAAGTCGCTGCTTGAGCGGTCAAGCAAGTCGTTGAAGGAACGTAGTTCTG
610 620 630 640 650 660 670 680 690 700
710 720 730 740 750
AT2G41 GTGGTGGAGGAGGAGAACGGTCAAAGCGGCGTCGTGCGCTGGATCACATCATAATGGTG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03F GTGGTGGAGGAGGAGAACGGTCAAAGCGGCGTCGTGCGCTGGATCACATCATAATGGTG
710 720 730 740 750
10 20 30 40 50 60 70 80 90 100
AT2G41 MQPETSDQMLYSFLAGNEVGGGGYCVSGDYMTTMQSLCGSSSSTSSYYPLAISGIGETMAQDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03F MQPETSDQMLYSFLAGNEVGGGGYCVSGDYMTTMQSLCGSSSSTSSYYPLAISGIGETMAQDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTD
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT2G41 KATLLAKVVQRVRELKQQTLETSDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPDLMEILKSLNMKTLRAEMVTIGGRTRSVLVVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_03F KATLLAKVVQRVRELKQQTLETSDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPDLMEILKSLNMKTLRAEMVTIGGRTRSVLVVAA
110 120 130 140 150 160 170 180 190 200
210 220 230 240 250
AT2G41 DKEMHGVESVHFLQNALKSLLERSSKSLMERSSGGGGGERSKRRRALDHIIMV
:::::::::::::::::::::::::::: ::::::::::::::::::::::::
RE_03F DKEMHGVESVHFLQNALKSLLERSSKSLKERSSGGGGGERSKRRRALDHIIMV
210 220 230 240 250
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