◆◆◆RE_03F09 detail◆◆◆

Code name	RE_03F09
Locus	AT2G42300
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment
sequence	>RE_03F09_981bp ATGGATCTGACCCAAGGTTTCAGAGCTAGATCCGGCGTTGTTGGGCCGGTGGCCGGACTAGAATCTCTCAATTTCAGCGACGAATTTCGGCACTTAGTGA CGACGATGCCTCCGGAGACTACTGGCGGCTCCTTCACGGCTTTACTCGAGATGCCTGTGACTCAGGCCATGGAGCTTCTCCATTTCCCAGATTCATCGTC TTCTCAGGCCAGAACCGTTACCAGTGGTGATATTTCTCCTACCACTCTTCACCCTTTCGGGGCTTTGACTTTTCCTTCTAACTCGCTTCTCTTGGACCGC GCCGCTCGTTTCTCGGTGATTGCTACAGAGCAAAACGGTAATTCTTCCGGCGAGACTGCTAACTCTTTACCTTCTAATCCCGGCGCGAATCTGGACAGAG TCAAAGCCGAGCCTGCTGAGACCGATTCAATGGTGGAGAATCAGAACCAGAGCTACTCTTCTGGAAAAAGGAAAGAACGCGAGAAGAAGGTCAAAAGCTC GACGAAGAAGAACAAGAGCTCCGTGGAGTCAGACAAGTTGCCATATGTTCATGTCAGAGCTCGTCGTGGTCAAGCTACTGATAACCATAGCTTAGCAGAG AGAGCAAGAAGGGAGAAGATAAACGCACGAATGAAGCTGCTACAGGAACTGGTCCCAGGCTGTGATAAGATTCAGGGCACTGCATTGGTTCTGGATGAAA TCATTAACCATGTGCAAACTTTACAGCGTCAAGTGGAGATGCTATCTATGAGACTTGCTGCAGTAAACCCCAGAATCGACTTCAATCTAGACAGCATACT GGCTTCAGAGAACGGCTCTCTTATGGATGGTAGCTTCAATGCAGAGTCTTATCATCAGCTGCAACAATGGCCTTTCGACGGCTACCACCAGCCGGAATGG GGAAGAGAAGAAGATCATCATCAAGCCAATTTCTCAATGGGTTCAGCTACTTTACACCCAAATCAGGTGAAAATGGAGCTC >RE_03F09_translated MDLTQGFRARSGVVGPVAGLESLNFSDEFRHLVTTMPPETTGGSFTALLEMPVTQAMELLHFPDSSSSQARTVTSGDISPTTLHPFGALTFPSNSLLLDR AARFSVIATEQNGNSSGETANSLPSNPGANLDRVKAEPAETDSMVENQNQSYSSGKRKEREKKVKSSTKKNKSSVESDKLPYVHVRARRGQATDNHSLAE RARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVEMLSMRLAAVNPRIDFNLDSILASENGSLMDGSFNAESYHQLQQWPFDGYHQPEW GREEDHHQANFSMGSATLHPNQVKMEL
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 980/981 (99.9%)（アミノ酸配列で326/327 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT2G42 ATGGATCTGACCCAAGGTTTCAGAGCTAGATCCGGCGTTGTTGGGCCGGTGGCCGGACTAGAATCTCTCAATTTCAGCGACGAATTTCGGCACTTAGTGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F ATGGATCTGACCCAAGGTTTCAGAGCTAGATCCGGCGTTGTTGGGCCGGTGGCCGGACTAGAATCTCTCAATTTCAGCGACGAATTTCGGCACTTAGTGA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G42 CGACGATGCCTCCGGAGACTACTGGCGGCTCCTTCACGGCTTTACTCGAGATGCCTGTGACTCAGGCCATGGAGCTTCTCCATTTCCCAGATTCATCGTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F CGACGATGCCTCCGGAGACTACTGGCGGCTCCTTCACGGCTTTACTCGAGATGCCTGTGACTCAGGCCATGGAGCTTCTCCATTTCCCAGATTCATCGTC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G42 TTCTCAGGCCAGAACCGTTACCAGTGGTGATATTTCTCCTACCACTCTTCACCCTTTCGGGGCTTTGACTTTTCCTTCTAACTCGCTTCTCTTGGACCGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F TTCTCAGGCCAGAACCGTTACCAGTGGTGATATTTCTCCTACCACTCTTCACCCTTTCGGGGCTTTGACTTTTCCTTCTAACTCGCTTCTCTTGGACCGC 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT2G42 GCCGCTCGTTTCTCGGTGATTGCTACAGAGCAAAACGGTAATTTTTCCGGCGAGACTGCTAACTCTTTACCTTCTAATCCCGGCGCGAATCTGGACAGAG ::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F GCCGCTCGTTTCTCGGTGATTGCTACAGAGCAAAACGGTAATTCTTCCGGCGAGACTGCTAACTCTTTACCTTCTAATCCCGGCGCGAATCTGGACAGAG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT2G42 TCAAAGCCGAGCCTGCTGAGACCGATTCAATGGTGGAGAATCAGAACCAGAGCTACTCTTCTGGAAAAAGGAAAGAACGCGAGAAGAAGGTCAAAAGCTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F TCAAAGCCGAGCCTGCTGAGACCGATTCAATGGTGGAGAATCAGAACCAGAGCTACTCTTCTGGAAAAAGGAAAGAACGCGAGAAGAAGGTCAAAAGCTC 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT2G42 GACGAAGAAGAACAAGAGCTCCGTGGAGTCAGACAAGTTGCCATATGTTCATGTCAGAGCTCGTCGTGGTCAAGCTACTGATAACCATAGCTTAGCAGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F GACGAAGAAGAACAAGAGCTCCGTGGAGTCAGACAAGTTGCCATATGTTCATGTCAGAGCTCGTCGTGGTCAAGCTACTGATAACCATAGCTTAGCAGAG 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT2G42 AGAGCAAGAAGGGAGAAGATAAACGCACGAATGAAGCTGCTACAGGAACTGGTCCCAGGCTGTGATAAGATTCAGGGCACTGCATTGGTTCTGGATGAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F AGAGCAAGAAGGGAGAAGATAAACGCACGAATGAAGCTGCTACAGGAACTGGTCCCAGGCTGTGATAAGATTCAGGGCACTGCATTGGTTCTGGATGAAA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT2G42 TCATTAACCATGTGCAAACTTTACAGCGTCAAGTGGAGATGCTATCTATGAGACTTGCTGCAGTAAACCCCAGAATCGACTTCAATCTAGACAGCATACT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F TCATTAACCATGTGCAAACTTTACAGCGTCAAGTGGAGATGCTATCTATGAGACTTGCTGCAGTAAACCCCAGAATCGACTTCAATCTAGACAGCATACT 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT2G42 GGCTTCAGAGAACGGCTCTCTTATGGATGGTAGCTTCAATGCAGAGTCTTATCATCAGCTGCAACAATGGCCTTTCGACGGCTACCACCAGCCGGAATGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F GGCTTCAGAGAACGGCTCTCTTATGGATGGTAGCTTCAATGCAGAGTCTTATCATCAGCTGCAACAATGGCCTTTCGACGGCTACCACCAGCCGGAATGG 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 AT2G42 GGAAGAGAAGAAGATCATCATCAAGCCAATTTCTCAATGGGTTCAGCTACTTTACACCCAAATCAGGTGAAAATGGAGCTC ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F GGAAGAGAAGAAGATCATCATCAAGCCAATTTCTCAATGGGTTCAGCTACTTTACACCCAAATCAGGTGAAAATGGAGCTC 910 920 930 940 950 960 970 980 10 20 30 40 50 60 70 80 90 100 AT2G42 MDLTQGFRARSGVVGPVAGLESLNFSDEFRHLVTTMPPETTGGSFTALLEMPVTQAMELLHFPDSSSSQARTVTSGDISPTTLHPFGALTFPSNSLLLDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F MDLTQGFRARSGVVGPVAGLESLNFSDEFRHLVTTMPPETTGGSFTALLEMPVTQAMELLHFPDSSSSQARTVTSGDISPTTLHPFGALTFPSNSLLLDR 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G42 AARFSVIATEQNGNFSGETANSLPSNPGANLDRVKAEPAETDSMVENQNQSYSSGKRKEREKKVKSSTKKNKSSVESDKLPYVHVRARRGQATDNHSLAE :::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F AARFSVIATEQNGNSSGETANSLPSNPGANLDRVKAEPAETDSMVENQNQSYSSGKRKEREKKVKSSTKKNKSSVESDKLPYVHVRARRGQATDNHSLAE 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G42 RARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVEMLSMRLAAVNPRIDFNLDSILASENGSLMDGSFNAESYHQLQQWPFDGYHQPEW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F RARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVEMLSMRLAAVNPRIDFNLDSILASENGSLMDGSFNAESYHQLQQWPFDGYHQPEW 210 220 230 240 250 260 270 280 290 300 310 320 AT2G42 GREEDHHQANFSMGSATLHPNQVKMEL ::::::::::::::::::::::::::: RE_03F GREEDHHQANFSMGSATLHPNQVKMEL 310 320

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